Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->YAB1                                      <---------ICU4                                      <--------ATHB1                                      <---------AHL20(2)                                      <---------AHL20(1)            ---------->DOF2        --------->YAB1           --------->AHL20(2)   <----------DOF2                                         --------->ANAC46   ----------->RAV1(1)    <---------WOX13(1)                                         --------->ZAT14  <----------ID1        --------->ATHB12   <-----------GT1                           <---------ZAT18 ------->DOF2      <---------ARR14(2) --------->AHL20(2)    --------->ARR14(2)     --------->ZAT14 -- ----->AtMYB61     --------->ARR14(2)--------->ICU4    ------>ZmHOX2a(1)      <-------TEIL       <---   caaagcgacaaaattaaagcggttcttaattggtctttaataatttttcatctcgtcctccatatatacgattatacacatacactgttcacacaaaaat  9312400                                                                          <-------MYC2                                                                          <-------PIF5                                                                          ------->PIF5                                                                          ------->MYC3                                                                          ------->MYC4                                                                          <-------MYC4                                                                          ------->MYC2                                                                          <-------MYC3                                                                          <-------PIF4                                                                          ------->PIF4                                                                         <---------O2                                                                         --------->TGA1a                                                                         --------->O2                                                                         ============================                                                                         <---------TGA1a                                                                       <------------OsbHLH66                                                                    <-------MYC3                                                                    <-------MYC2                                                                    ------->MYC4                                                                    ------->MYC3                                                                    ------->MYC2                                                                  ------->MYC3                     --                                                                  <-------MYC3                    <--                                                                 <---------TGA1a                -----                                                                 --------->TGA1a             --------                                       <---------MYB52(1)      --------->ANAC46        <---------ANAC58                                      =============================================MYC_MYB   --------                 --------->bZIP60(2)  <-------GAMYB       --------->ARR14(2)       --------->CCA1(2)                 --------->ANAC58     =====================================MYC_MYB<---------ARR14(2)                 --------->ANAC46    <---------MYB46(3) --------->ANAC58------------>OsbHLH66--------     <---------TOE2(2)     <---------CCA1(2)          <-----------GT1 <---------ZAT18  <---------ANAC58 <-------TEIL    --------->ANAC58    --------->MYB52(2) --------->ANAC58------->TEIL  --------------- ------->TOE2(2)------->TEIL------->TEIL    <-----------GT1--------->CCA1(2)      --------->ARR14(2) ----TEIL    --------->AtLEC2       <-------TEIL    <-----------HVH21 --------->ZAT18 ---------------   acatacgtagatttcatgcacgtcaatgtgtatctatgttcgttgttcaccatatgtcacgatacacacatgtgcacgtgtgtatatatgcgtacacgat  9312500  --------->YAB1 <---------YAB1 ====================bZIP_DOF ------->YAB1 -------YAB1                              --------->MYB52(1)       --------->ANAC55(2) ---->CCA1(2)                      <---------HSFB2a(2)             <---------ANAC55(2) ->ANAC46                          <---------HSFC1(1)            --------->AHL20(2) ->ANAC58           --------->YAB1 --------->HSFB2a(2)     --------->YAB1 ->ANAC58 <----------DOF2          --------->HSFC1(1)   --------->TOE2(3)                          <- >AtSPL8<---------ZAT18    <---------At4g35610         --------->ATHB12                        ------ >AtSPL3--------->ZAT18    --------->At4g35610------------>CBF   <---------AHL20(2) ---------->DOF2--   atgatgatagtgcatttttgtatcatatgcgctgattctagaagtaatggcaatgcttcattagtaattaagtatcgataacatactaaagtatcgatat  9312600                                                                                                    =                                                                                                    -                                                                    <---------MYB52(1)            <--                                                                   --------->TOE2(3)              ---                                                                  <---------ANAC55(2)         <------                                                                  --------->ANAC55(2)       <--------                <---------YAB1           <-----------RAV1(2) <---------------AtSPL8       <---------AHL20(2)        <---------AHL20(2)              <------NtERF2        --------------->AtSPL8  <---------AHL20(1)      <---------AHL20(2)         ---------->DOF2             <---------------AtSPL3  <---------AHL20(2)    <---------AHL20(2)         --------->ANAC58        ----------->GT1               --------->AHL20(1) ------TEIL   --------->YAB1   --------->ANAC58     --------->CCA1(2)               --------->AHL20(2) --------->AtSPL8--------->YAB1--------->ANAC46    <---------ARR11(3)         <------------CBF<------ ----->TEIL <-----------GT1--------->CCA1(2)       --------->ARR11(3) <------------CBF  <---------AHL20(2)   gtacatatattttttttcatgataagaagaaatacgaaaggcctcaggcctgagatatagtatatagtacgttattgtcttattgattatattttttctt  9312700 =============HOX2a_HOX2a     <---------At4g35610 ----->ZmHOX2a(2)             --------->ZAT2            ----------->GT1                            -- -------ARR11(3)              --------->At4g35610       <---------ANAC55(2)                        <- ------>ARR11(3)              <---------ZAT2           <---------ICU4                             --- ---ANAC58          <---------DAG2                 <---------AHL20(2)                    <---------ANAC58 ---GT1------>ZmHOX2a(1)  <-----------HVH21    ----------->GT1            <----------DOF2<---------ANAC58 ---ANAC58       <-----------GT1             <------------CBF    ---------->DOF2      <----------DOF2   gatcttgtcctcgtgtttataacctttccttcagctccagttttgaatattgtttaataagtaaaaccaaagatagctttcaaacaaactttcttgggaa  9312800                                             <------NtERF2                                             --------->ATERF1(1)                                             <-------GAMYB                                             --------->At4g35610                                             <---------ZAT2                                             <---------At4g35610                                            <---------ERF1                                            ------>NtERF2                                            <---------MYB46(3)                                            <---------RAP2.3(1)                                           <---------ANAC46                                           <---------ATERF1(2)                                           <---------ANAC58                                           <---------RAP2.3(2)                                           <---------RAP2.6(2)                                           --------->ATERF1(2)                                           <---------ANAC58                                           <---------RAP2.3(3)                                           <---------DEAR3(1)                                           <---------DREB2C(2)                                           <---------RRTF1(2)                                           <---------RRTF1(3)                                          --------->RAP2.6(3)           --------->AHL20(1)      ----------->HVH21        <-------TEIL           <---------AHL20(2)    --------->At4g35610       <-----------HVH21       --------->ARR14(2)           --------->AHL20(2)    ----------->RAV1(2)  <---------LBD16              --------->ARR11(3)        --------->YAB1           <---------ZAT2  --------->ARR14(2)                <---------ARR14(2) ------->AHL20(2)                <---------At4g35610 ------>ZmHOX2a(1)    --------->ANAC58 --------AHL20(2)                --------->ZAT2  <---------ARR14(2)----------->RAV1(2)  --------->ATHB12 ------>AHL20(2)               <-----------RAV1(2) ------>ZmHOX2a(2)      --------->ANAC58   attaattcaaaaataaaatgaaattttaaaaactcagctgaaatggcggctgatccttcgggttcagacccctggcaaggaagcatatattgatttcaac  9312900                                                    --------->STY1(2)                                                    <---------STY1(2)                                         ------>MYB83                    ------>ZmHOX2a(1)                                         ------>MYB46(1)             --------->ARR14(2)            --------->ZAT14            <---------MYB59      <---------------AGL15            <---------ZAT14            <---------MYB111(1)  --------------->AGL15          --------->ANAC46             <---------MYB46(2)  ----------------->AGL1          --------->bZIP60(2)          <---------MYB111(2) ----------------->AGL3                  <- <---------At4g35610         ------>ZmHOX2a(1) --------->ZAT6        <---------ARR14(2)            <- --------->At4g35610 <---------ZAT14  --------->ANAC46     <-----------------AGL2     <----------DOF2   ttaagctaaaccacttcacttacttcacttcctcttctctaccaaactcactctagctagttccacttagggttcctctcttccaactcttttttgtttt  9313000                                                                                      --------->DEAR3(1)                                                                                      --------->TOE2(2)                                                                                     <---------MYB55(2)                                                                                     --------->DEAR3(2)                                                                                     --------->MYB46(3)                                                                        <---------TOE2(3)                                                                        <---------TOE1(3)                                                                        --------->MYB59                                  --------->At5g28300               --------->ARR14(2)------->GAMYB                                <---------DEAR3(1)                --------->LBD16   -------->P-------                              ------->GAMYB                      --------->LBD16    ------>MYB46(1)                           --------->MYB52(1)                   <---------LBD16     ------>MYB83           --------->CCA1(2) --------->MYB46(3)                <---------ANAC46    --------->MYB52(1) --------TOE2(3)     ----------->GT1                      <-----------RAV1(1)    --------->MYB46(3) --------TOE1(3)<---------------------WRI1         <------ZmHOX2a(1)<---------ARR14(2)----------->HVH21   tagggttttagagaaatgggagatagaaacaacgacggtgatcagaaaatggaggatgtattgttgcccggatttaggtttcatccaaccgacgaagagc  9313100                         <-------TEIL                      <---------HSFC1(2)                      --------->HSFC1(2)                                                    ------>ZmHOX2a(2)                      --------->HSFB2a(1)                                                  <---------HSFB2a(1)                      ----------->GT1                                                      --------->HSFC1(2)                --------->At4g35610                                                        <---------HSFC1(2)                <---------At4g35610                                                        --------->HSFB2a(1)             ---------->DOF2                                                              --------->ARR11(3)          ----------------->AGL1                                                          <---------ARR11(3)          ----------->RAV1(2)                                                             <---------ARR14(2)          <-----------------AGL1                                                     <---------LBD16-   <---------At4g35610<------MYB46(1)                                               ----------->RAV1(2)   --------->HSFC1(2) <------MYB83 ------->GAMYB                             <---------ICU4<------ZmHOX2a(2)   <---------HSFC1(2) <---------HSFB2a(1)        <---------At4g35610<---------ARR11(3)    --------->ARR14(2) -->ARR11(3)----------->HVH21--------->ANAC46    --------->At4g35610--------->ARR11(3)--------->LBD16   tcgtaagcttctacctgaagcggaaggttcaacacaaccctctctccattgagctcataagacaactcgatatctacaaatatgacccctgggatcttcc  9313200                                      ----------->GT1                                     <---------TOE2(3)                                     <---------TOE1(3)                                             <-                                  <---------AHL20(2)                                              ---                                <---------YAB1                                                    ---             --------->YAB1 --------->YAB1                                                -----------          <----------DOF2<---------CCA1(2)              ---------->DOF2             <-----------RAV1(1) -------->AHL20(2)<----------DOF2--------->YAB1    --------->AHL20(2)         ---------->ID1  -------   aagtatatatgactttcatacttttgtatatcatattataaggtttaatataagaaaataaagtctaaacaagtttttttgtttttttgttgttgttaaa  9313300  Previous    Next  AGI:  At1g26870.1    Description:  ANAC009 (Arabidopsis NAC domain containing protein 9); transcription factor. Identical to Putative NAC domain-containing protein 9 [Arabidopsis Thaliana] (GB:Q9ZVH0); similar to ANAC094 (Arabidopsis NAC domain containing protein 94), transcription factor [Arabidopsis thaliana] (TAIR:AT5G39820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61983.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 9312843    to: 9314970    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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