Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->LBD16                                                              <---------ANAC58                                                              <---------ANAC46                                                              <---------HSFB2a(2)             -------                                                              <---------ANAC55(2)       --------->AHL20(2)                                                              <---------ANAC58          <---------AHL20(2)                                                         --------->HSFB2a(1)       ------>ZmHOX2a(2)                                                        <---------ARR14(2)        <------ZmHOX2a(2)                                                        <---------ARR11(3)       >>>>>>>>>GATA-3                                                        --------->ARR14(2)       >>>>>>>>>GATA-2                                                        <-----------ARR10        >>>>>>>>>GATA-1                                                        --------->ARR11(3)       >>>>>>>>>GATA-4                                                  --------->WOX13(1)             --------->AGP1                                                 --------->AHL20(2)             --------->GLK1(1)                    --------->AHL20(2)           <---------AHL20(2)    --------->MYB52(1)     -------                  --------->YAB1                <---------ATHB12    --------->YAB1--------->CCA1(2)                --------->AHL20(2)         --------->ANAC58   --------->ANAC55(2)<---------ARR11(3) - -->ZAT6    --------->YAB1          ---------->DOF2    <---------CCA1(2)   ---------->DOF2    ------- -AHL20(2) <-------TEIL    <----------DOF2 --------->ANAC58   --------->HSFB2a(2)--------->ARR11(3)--   tagaacagagacattcataaaaataaaaactttgtcttgaaagagaagcaataaatcaaatcttccgtaagaataacgaaagagatctaataaaacaagc  9303700                                                                                             --------                                           <-----------GT1                    --------->ANAC58       --------->ZAT6             --------->ICU4                        ---------->DOF2----------->HVH21 -->ANAC46                    --------->TOE2(3)                   <---------RVE1(1)   ------>ZmHOX2a(2) -->ANAC58                   --------->ANAC46                    --------->ARR11(3)  <------ZmHOX2a(2) ---------->RAV1(1)          --------->bZIP60(2)                 <---------GLK1(2)  --------->ARR14(2) -->ANAC58     <----------DOF2<-----------TGA1                   <---------ARR11(3) <---------ARR14(2) ------->REM1(1)            <-----------STF1                --------->MYB52(1)--------->ANAC58   tacaacaaaacactagtctttaactactacaacgtcattagttattaacagattgagaaacaaaacagatttttaaaagtaagcccgatctgacaaaaca  9303800                                                          <---------ZAT6                                                      ------>ZmHOX2a(2)                                                     --------->CCA1(2)                                                     <------ZmHOX2a(2)                                                    <---------ARR14(2)                                                    <---------ARR11(3)                                                    --------->AGP1                                                    --------->ARR11(3)                                                    --------->ARR14(2)                 --------->YAB1          --------->ETT(1)                   --------->TOE1(2)                         <---------ICU4       <------MYB83                        <---------ARR14(2)                          -------->HAHB4       <------MYB46(1)                     --------->ARR14(2)                       --------->YAB1      <---------AtMYB61                    --------->GLK1(2)           <---------MYB46(3)     <---------WOX13(1)          --------->ICU4    --------->GLK1(1)  <--------P ----------->GT1   --------->ATHB12       <-------TEIL    <---------GLK1(2)           <---------WOX13(1)       <----- ->MYB52(1)  ---------->DOF2    --------->ARR11(3) <---------GLK1(1)<---------MYB46(3)--------->ICU4   gagatagattggtcggaaagaaggaacatacagagataatgaaggaatctgggagatctagtggtacaattggttgatgagagaagtaataatacccaaa  9303900                              --------->YAB1                             --------->ICU4                           --------->YAB1                          --------->ICU4                                  --------->ATHB12                   ----------->GT1                                       <---------YAB1                  <---------MYB46(3)                                   <---------At4g35610                  ----------->GT1                               <---------ANAC58                 --------->ALFIN1                               <---------ANAC55(1)               <---------DEAR3(2)                               --------->ANAC55(2)               <---------MYB46(3)                               <---------ANAC55(2)              --------->ETT(1)<---------ICU4                    <---------ANAC58              <---------DREB2C(2)                               <---------ANAC46              <---------DEAR3(1)                               <-------TEIL              <---------At1g77200       ---------->DOF2       --------->CCA1(2) <xxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------ANAC46          <---------ARR14(2)                     < --------->LBD16<-------GAMYB<---------YAB1                  --------->ARR14(2)                     < ----ALFIN1   <---------DEAR4(1)----------->TGA1            <------ZmHOX2a(1) <-----------RAV1(1)   <   ctccgagagattgttgtcggtgggaaaaatgatgatgacggagaaaggaaggaaggaatagaggatacgtgtaagatgatttgtgggggaaccctagttt  9304000           <-----------TGA1     --------->ARR14(2)                                     <----------DOF2     <---------ARR14(2)                                 <------NtERF2 --------->LBD16                                    <---------At4g35610         <---------GLK1(1) <-- ---------ANAC58                                  --------->DAG2                --------->GLK1(1) <-- ---------ANAC58                     ---------->DOF2--------->ZAT2          <------ZmHOX2a(1)  ------ ---------ANAC46               ----------->GT1   ---------->DOF2   <---------YAB1            <-------   atgcgtgaatcgtcgtcaccatctagccatgggatgtgaaaaagagagagataaagctggcgattttttgttattgaaggagaaatctctctaatttgcc  9304100                                                                  --------->TGA1a      <---------AHL20(2)                                                                  ===================================                                                                  ===================================                                                                  <---------TGA1a     <---------YAB1                                                 <----------DOF2  --------->O2 <---------ANAC58 -------DAG2                                     ===========================bZIP_DOF <---------AHL20(2) --------DOF2             *TSS                ------->TEIL------------>CBF     <---------ANAC58 ---->ID1         <---------YAB1         --------->At4g35610      <---------O2 <---------ANAC46  <--- ----GT1          <---------TOE2(3)    <------ZmHOX2a(1)  <-------TEIL   <---------RVE1(1) <---------AHL20(2)   ctttttaaaacagagccattgagattgagagagagagaagaggagatgaaactttgtagattcaatcgacgtctgatattttcgtatttttatttttttc  9304200               <------NtERF2                                                <----------ID1              --------->LBD16 --------->AHL20(2)                            ----------->GT1              ----------->GT1 <---------AHL20(2)                           ------------------------>ANAC81            --------->At4g35610                                            ----------->GT1      ---------->DOF2     --------->AHL20(2)                          --------->AHL20(2)   --------->TOE2(3)      <---------AHL20(2)                    --------->AHL20(2)   <---------MYB59       --------->AHL20(2)                    --------->AHL20(2)   --------->TOE1(3)  --------->AHL20(2)                    --------->AHL20(2)                      - =======bZIP_DOF      --------->YAB1                       <---------AHL20(2)         ---------->DOF2 =======bZIP_DOF  --------->ICU4   ---------->DOF2         --------->AHL20(2)    --------->AHL20(2) < -------DOF2<---------LBD16  --------->AHL20(2)        --------->AHL20(2)---------->DOF2         ----   tttaacctaaaatcggcggaaaaattataaaattaataaaagctaagaaaaatttgataaaataaataaaaaataaaaaggaaaaaaataaagaaaatga  9304300                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(1)                                                            <---------AHL20(2)            --------->AHL20(1)          ----------->GT1                                   <---------AHL20(1)            <---------AHL20(2)        <---------ANAC58              <---------ANAC58      --------->AHL20(1)            <---------ARR11(3)        <---------ANAC58           --------->GLK1(1)       --------->YAB1                 --------->ARR11(3)        <---------ANAC46      ----------->GT1     --------------->AtSPL8               --------->AHL20(2) -------->At4g35610          --------->DAG2       --------------->AtSPL3         ----------->GT1   <- ---------At4g35610         ---------->DOF2 --------->At5g28300      <-----------GT1 --------->AHL20(2) ------>DOF2      --------->AHL20(2)  <---------ANAC58     --------->AHL20(2) -------->P --------->AHL20(2)   aaagctgatagcttgaaaaaaaaaatacaaaaaagtgatttcttactgtaattcagtacaattatattgtttcacactctaaccagaaaaaatatattgt  9304400                                                                                                   --                                                ----------->GT1                                   ---                                                <----------ID1                                  <----                                               ----------->GT1                                  <----                                           --------->ATHB12                                     <----                                           --------->ATHB51                                   <------           <-----------GT1              --------->YAB1 --------->AHL20(2)                     <------ ----------GT1                          ----------------->AGL1           ----------->GT1      <------   ttcacactgtttataaccagaaaccagaatgaataagtttatgcataattgggaaaaaaaaatagagaattgagagagtttattagaagttaagtttcgc  9304500     <----------DOF2 ------->REM1(2)                           <---------YAB1 ------>ALFIN1                        --------->AHL20(1) -----ANAC58                          --------->AHL20(2) -----ANAC46                          <---------AHL20(2) -----ANAC58     <---------TOE2(3)    <---------AHL20(1)            --------->HSFB2a(2) ---ANAC58      ---------->DOF2      --------->AHL20(2)             <---------HSFB2a(2)             < ---ANAC46     --------->AHL20(2)    <---------AHL20(2)    <---------------AtSPL3                   - ---ANAC58     <---------AHL20(2)--------->AHL20(2)    --------->AHL20(2)         --------->KAN4(2) <   gtggaggctttacaaaattaaagtttttgatacaaaaaaataaatttgattaaactataaattggtacttccagtagggaagaacatacctctgaacatg  9304600  Previous    Next  AGI:  At1g26850.1    Description:  dehydration-responsive family protein. similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G18030.1); similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G10440.1); similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G33170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48396.1); similar to putative methyltransferase [Solanum tuberosum] (GB:ABO92980.1); similar to unknown [Malus x domestica] (GB:AAF27920.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159) Range:  from: 9300860    to: 9304126    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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