Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->bZIP60(1)                              --------->ANAC58                           ----------->TGA1                           ----------->HVH21                         --------->O2                 ------>ZmHOX2a(1)                         <---------O2        ------------>AtMYB77  --------->LBD16                         --------->ZAT2     --------->MYB46(3)    --------->ANAC46                       ------>NtERF2 --------->At4g35610         <---------LBD16                <---------ICU4--------->ANAC58    <---------ARR14(2)           ----------->RAV1(1)<---------bZIP60(1) --------->ARR14(2)               --------->GLK1(2)     --------->AtMYB61--------->DEAR3(1)   ------>NtERF2--------->STY1(2)---------->DOF2   tactagaccacaacaacataatcgccgaggtgacgaaacagttgcagccacggttcctagctaatcccacggagataaagaagagaatcgagtcgctcat  9298300                     <---------------AtSPL3                     <---------------AtSPL8              ---------->DOF2         <---------DAG2         <---------ANAC58             <----------DOF2                                 ---------->DOF2         <---------ANAC46         --------->ARR14(2)  --------->TOE2(3)      ------->GAMYB         <---------ANAC58       --------->LBD16 --------->STY1(2)          --------->ANAC58      <---------GLK1(1)      --------->MYB52(1) <---------STY1(2)          --------->ANAC58      --------->GLK1(1)  --------->ZAT14     <---------MYB52(1)          --------->MYB46(3)     <---------ARR11(3)  <---------ZAT14 <---------At5g28300           --------->AtMYB61    <--------   tgaacgagatttcttggaaagggatagtacagaccggaaactttaccgctatctagcctaaataagttgaataccacaacccaaaaaaaaaaggctttac  9298400                                                              ----------->GT1                                                              <---------DEAR3(2)    <-----------HVH21                                                              <------MYB46(1)       <-----------TGA1                                                              <------MYB83    <---------ALFIN1                                                        <---------MYB52(1)   ------>MYB46(1)                                                     --------->SPL1(2)       ------>MYB83                                                     --------->SPL7        --------->AtMYB61                                                   <---------ZAT14        <---------MYB55(2)                   <-----------GT1     --------->ARR11(3)   <---------------------WRI1              <---------DAG2           <---------ARR11(3) <---------MYB46(3)----------->RAV1(1)              <----------DOF2   <---------TOE2(3)  <---------SPL7         --------->MYB46(3)     <----------DOF2   ------>ZmHOX2a(1)           --------->ZAT14    <---------MYB52(2)  --------->MYB52(1)  <------------------------ANAC81----------->GT1 <---------------AtSPL3   --------->DEAR3(2) --DOF2  <----------DOF2  <---------YAB1        <------------------SPL14 ------->TEIL   <---------MYB52(2)   tctgtttctttctttgctttatttccttatgtttgatgtaaaatcttttgaactgtacggtagtcggtaagaacgaaccaacacagcgtcactaccggtt  9298500                                                                                <---------ZAT2                                                                                <------NtERF2                                                                               <---------ATERF1(1)                                                                               ------>NtERF2                                                                               <---------RAP2.6(3)                                                                               <---------DEAR3(2)                                                                              <---------RAP2.6(2)                                                                              --------->RAP2.6(2)                                                                           --------->TCP20                                                                        --------->ALFIN1                                                                        <---------MYB52(1)                                                                       <-------MYC3                                                                       ------->MYC3                                                                      --------->TGA1a                                                                      <---------O2                                                                      ===============================bZIP_DOF                                                                      --------->O2                                                                      ===============================                                         --------->ARR14(2)           <---------TGA1a                                         <---------ARR14(2)     --------->HSFB2a(2)                                     <---------At4g35610        <---------HSFB2a(2)    ------>NtERF2                                <----------DOF2             <---------GLK1(2)--------->ATERF1(1)                              ---------->ID1 <---------ANAC46--------->GLK1(2)<---------ATERF1(2)                         <----------DOF2--------->At4g35610--------->At4g35610--------->ATERF1(2)                <-----------GT1 ================================================bZIP_DOF  <----------DOF2        <-------TEIL<----------DOF2--------->YAB1          <---------At4g35610<---------DEAR3(1)   taatcgaatatacatttgtttccttttcttttgtctttcatcagataccgtatgtgatttcagcttctggacacgttgggccggctcgaggccttttaag  9298600                                                                     ------>NtERF2                                                                     --------->LBD16                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                   <---------LBD16                                                             --------->AHL20(2)                                                       <---------ANAC58                 <----------ID1                        <---------ANAC58                           <--          ----------->GT1            <------NtERF2     <---------ANAC46  --------->MYB52(1)       <--       ------------>MYB.PH3(1)     <---------RAP2.6(2) ----------->GT1>>>>>>>>>E2Fd               <-- ===================MYC_MYB       <---------LBD16  <-----------RAV1(2)>>>>>>>>>E2Fc    <----------DOF2   gcccattttaaacggttaagagccaaaaaaaacattcgcggctaaaatttcaaccaggcgtaaaaaaatcccgccaaacgttggcaacgctttgtttata  9298700                                                                                           --------->LBD16                                                                                          --------->LBD16                                                 ----------->HVH21                       <---------LBD16                                             --------->RVE1(1)                         ------->GAMYB                                            --------->GLK1(2)                      --------->MYB46(3)                                            <---------ARR11(3)                   <-----------GT1         ----------------->AGL1             --------->ARR11(3)              <---------ANAC46    --------->YAB1               <---------HSFB2a(2)                        <---------ANAC58        <   <---------YAB1                --------->HSFB2a(2)                        <---------ANAC58<------NtERF2 -------ANAC58          ----------->HVH21  --------->CCA1(1)           <----------DOF2--------->MYB46(3) -------ANAC58        <------------CBF*TSS --------->RVE1(1)   <----------DOF2----------->GT1       < -------ANAC46    --------->ARR14(2) ----------->GT1       ----------->HVH21--------------------->WRI1   gcgttttcatagcctaatcggttccattgacatttctaggggaaaaaatctctcacagtgtctgactttggttctttgtcttgtaacaatcgccggaaaa  9298800                                                                                    ------>NtERF2                                                                                   --------->DEAR3(1)                                                                                   --------->RAP2.3(2)                                                                                   --------->RAP2.3(3)                                                                                  --------->RAP2.3(1)                ----------->HVH21                                                 --------->ORA47(2)                --------->ANAC46                                               ------>ZmHOX2a(2)                <---------ETT(1)                                              --------->CCA1(2)           --------->ARR11(3)                                                 <------ZmHOX2a(2)           <---------ARR11(3)                                                 --------->ARR14(1)           <---------ARR14(2)                                                --------->AGP1           --------->ARR14(2)                                                --------->ARR11(3)          <---------CCA1(2)                                                  <---------ARR11(3)          <---------GLK1(1)                                                  <---------ARR14(2)          --------->GLK1(1)                                                  --------->ARR14(2)    --------->CCA1(2)       <------ZmHOX2a(1)                               --------->GLK1(1)   --------->ARR11(3)      <------MYB83                           --------->DAG2 ------>NtERF2   <---------ARR14(2)      <------MYB46(1)                       ---------->DOF2 --------->LBD16   --------->ARR14(2)     --------->MYB59             <----------DOF2       <---------GLK1(1)  <------ZmHOX2a(1)      <--------P                --------->ANAC58    --------->At4g35610 ---------TOE1(3)------>NtERF2                     --------->ANAC58 --------->At4g35610<----------DOF2 ---------TOE2(3)----------->RAV1(1)          <----------ID1 --------->YAB1----------->ARR10   ttaaggatatggatatctccgacataggtaggaaacttagtctcgataacaacaagcttttaatcagaaaagctgcagagatccgccgtctttgcgatgc  9298900                                                                                        ------>ZmHOX2a(1)                                                                                      ---------------                                                                                    <-----------GT1                                                                                  <---------ICU4                                                                              <---------YAB1                      <-------GAMYB                                          <---------AHL20(2)                  <---------DEAR3(1)       <---------YAB1                   --------->YAB1               --------->ATHB12         --------->GLK1(2)                  <---------YAB1            --------->WOX13(1)         <---------ARR14(2)               <---------YAB1---------------       <-------TEIL  <---------DEAR3(1)<---------GLK1(2)              <----------DOF2---------->ID1   tcagttcgattcatccatcatcggcgttgtaagataaatccgattctgaatcccaaagtttcacatcgagtactttgattataatttttccttatgtgtt  9299000                                                           <------NtERF2                                                          --------->ABI4(1)                                                          ------>NtERF2 --------->YAB1                                                          <---------ATERF1(1)                                                         --------->DEAR3(1)                                                         --------->ATERF1(2)                                                         --------->RAP2.6(2)                                                         --------->RAP2.3(2)                                                         --------->ANAC46          <---------WOX13(1)                                                         --------->RRTF1(3)<---------ICU4                                                         --------->RRTF1(2)-------->HAHB4                                                         --------->RAP2.3(3)  --------->YAB1                           ------>ZmHOX2a(2)             --------->DREB2C(2) <---------YAB1                          <------ZmHOX2a(2)              <---------ATERF1(2) <---------TOE2(3)                         --------->ARR11(3)             --------->ORA47(2)--------->ICU4                         --------->AGP1                 --------->ERF1  <---------ICU4                         <---------ARR11(3)             --------->RAP2.3(1)--------->YAB1                         --------->ARR14(2)            <---------ATERF1(1)<---------YAB1                         <---------ARR14(2)        <---------GLK1(1)   <---------ATHB51<---------WOX13(1)                        <---------GLK1(1)      --------->HSFB2a(2)     --------->ICU4--------->ATHB12 --------->GLK1(2)     ----------->ARR10       <---------HSFC1(1)      <---------AHL20(2)   <-------- -->AGL1            <-----------HVH21          <---------HSFB2a(2)     --------->AHL20(2)--------->YAB1 -->AG          --------->YAB1 ---------->DOF2 --------->HSFC1(1)----------->GT1<---------YAB1   gagaatttgatttttctatcagggtgagatctgtaaagctgtgatttgtctagaaatcgccgccactaggtaaataattatcgtaattgatttataacga  9299100                     <---------ICU4 <---------ANAC55(2)                    --------->AHL20(1)                     --------->ATHB12<---------MYB59                       <---------AHL20(2)   -----                    <---------------AGL15                                  <---------AHL20(1)  ------                    --------------->AGL15                                 --------->AHL20(2)   <-----                   <---------ANAC55(2)                          <------MYB83                 <-------                   --------->ANAC55(2)                          <------MYB46(1)              --------               <-------GAMYB        --------->ANAC55(2)        <---------AtMYB61          <---------ZAT2              <------MYB83    --------->ARR11(3)               --------->MYB111(1)        --------->ZAT2              <------MYB46(1) <-----------ARR10                --------->MYB46(2)        --------->ANAC58              ----------->GT1 <---------ARR11(3)               --------->MYB59           --------->ANAC58    <---------ARR11(3)        --------->ARR14(2)             <---------MYB52(1)      --------->ANAC58 ---GT1--------->TOE2(3)      <---------ARR14(2)           <---------MYB46(3)        --------->ANAC58   tttcaatatccatagtgggttacttattgcagtatcttacttaacttgattcgaaatctattggttaggttgcagattatattcgataggcaagcagcgg  9299200  Previous    Next  AGI:  At1g26830.1    Description:  ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A); protein binding / ubiquitin-protein ligase. similar to ATCUL3B/CUL3B (Cullin 3B), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G69670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81888.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48405.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72935.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Cullin homology; (InterPro:IPR016158); contains InterPro domain Cullin repeat-like (InterPro:IPR016159); contains InterPro domain Culli Range:  from: 9295723    to: 9298528    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g26840.1    Description:  ATORC6/ORC6 (Origin recognition complex protein 6); DNA binding. Identical to Origin recognition complex subunit 6 (ORC6) [Arabidopsis Thaliana] (GB:Q9ZVH3;GB:Q6EWW9); similar to Probable origin recognition complex subunit 6, putative [Solanum demissum] (GB:AAU93586.1); contains InterPro domain Origin recognition complex subunit 6; (InterPro:IPR008721) Range:  from: 9298738    to: 9300686    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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