Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->GLK1(2)                                            <---------GLK1(2)                                     --------->HSFB2a(2)         --------->ARR11(3)          <---------HSFB2a(2)         <---------ARR11(3)       <----------DOF2 ------->DOF2                  --------->GLK1(2)                              <---------ARR14(2) ----->DOF2                   <---------GLK1(2)                               --------->ARR14(2) -->ANAC58             <---------ANAC55(2)  --------->ARR14(2)                --------->GLK1(2) -->ANAC58             --------->ANAC55(2)  <---------ARR14(2)               <---------GLK1(1)      - -->ANAC46             <---------ANAC46    <------ZmHOX2a(1)<----------DOF2  <---------CCA1(2)     --   aagagcaagaacatcttggaaaatcacgtagagattctttgggaaggattctgagttgatagctttgatcagcgtttgcaaatctgaagcgaaggtgact  9295300                                                               <------ZmHOX2a(1)                                                         ---------->DOF2       <---------ALFIN1                                                       <---------------AGL15--------->ANAC58                                                  --------->At4g35610   <---------HSFB2a(1)               --------->ANAC46                   <---------At4g35610 ----------->RAV1(1)               <---------TOE2(3)                <---------ANAC58   --------->ANAC58  ---------->DOF2                   ---------->DOF2   ----------------->AG  --------->ANAC58 ----->ZmHOX2a(1)                  <---------REM1(1)  ----------------->AGL1--------->ANAC46 ------->TOE2(3)       <-----------RAV1(1)      <---------ANAC58   --------->ANAC58           -------   tcctaaaaccgagttctaaggcattttgttgggctagatgaagcgccatggcttctgccaaaagaggagaagcaacattcgccactctaagggattcaaa  9295400                                                       ------->PIF5                                                       <-------PIF5                                                      ==========================================bZIP_DOF                                                      <---------bZIP60(2)                                                      --------->O2                                                      --------->TGA1a                                                      <---------O2                                                      <---------TGA1a                                                      <---------ANAC58                                                   ----------->HVH21                                                  --------->DEAR3(2)                                               ----------->HVH21           --------->ANAC46                                       <---------AHL20(2)             <---------ARR14(2)                                      --------->AHL20(2)             <---------CCA1(2)  <----------DOF2                     <---------AHL20(2)         <-----------HVH21   ---------->DOF2> --->DOF2                          --------->WOX13(1) <---------ANAC58--------->ARR14(2)   --------->MYB52(1)   gcctctttatgaaatagaagttgacatatttttagttcaattaaatgaaatgaccgacgtgccaatttgtcatatccacataagtataaaagctaactaa  9295500                             <---------ANAC46                             <---------ANAC58                             <---------ANAC58                       <-----------GT1          --------->TOE1(2)                             <------ZmHOX2a(1)                  --------->AHL20(2)          <------ZmHOX2a(2)                           ---------->DOF2 >>>>>>>>>>>>>>>>LFY   --------->MYB52(1)  ------>ZmHOX2a(2)     <-----------GT1--------->MYB46(3)   acctccaatgtcaaaaaaaaaaaaataactggcttcgactagggatcgatccttggacttcgatatttcacaattctttgtaaccaatataccaaaggac  9295600                                  --------->TOE2(3)                        --------->AHL20(2)                       <---------AHL20(1)                       --------->AHL20(1)                       --------->AHL20(2)                   <---------AHL20(2)              ------>NtERF2      --------->ANAC55(2)       <---------ARR14(2)                   <----            --------->LBD16      <---------ANAC55(2)   <---------ZAT2                           <----           --------->ANAC46 <---------AHL20(2)         --------->ZAT2                          ------           ------->GAMYB<---------AHL20(2)             --------->At4g35610                     <-----          --------->MYB46(3)<---------ICU4             <---------At4g35610<---------DAG2      <------       --------->MYB46(3)  --------->AHL20(2)         ----------->RAV1(1) <----------DOF2    <-------    ----------->HVH21  <---------AHL20(2)          --------->MYB52(1) <---------ZAT14      <---------ANAC46  ----------->GT1<----------DOF2<-------TEIL      --------->AtMYB61   --------->ZAT18  --------->At4g35610 --------->GLK1(2) --------->AHL20(2)            --------->MYB46(3)   <---------ZAT18  <---------At4g35610   gagaatgtgacaaccgcgactttaatttaataaatacgttatagtttggaaaccaccagcagagacggagagtccacttttatttcttccgctccgtttg  9295700     ------>ZmHOX2a(1)   <------------------------ANAC81                                   --------->At4g35610 --MYB46(1)                                                         <---------DEAR3(1) --MYB83                                                            --------->ANAC46 --->MYB59                                                <---------ARR11(3) ----AtMYB61           *TSS                               --------->ARR11(3)                <-------- ---MYB55(1)      <---------ALFIN1        <---------MYB52(1)     ----------->HVH21--------->TOE2(3)-- --MYB52(1)<<<<<<<<<TBF1                --------->ANAC46 <---------CCA1(2)        --------->TOE1(3)<-   gtctgtcctcttcttcttctccaccttcgaaatctatcttctccgatacctctctatctatatctcttcgacgctgcaaattagccttaagcttctttct  9295800                                                          --------->ANAC58                                                          --------->ANAC58                                                          --------->ANAC55(2)                                                          --------->ANAC55(1)                                                          --------->ANAC46                 <---------ICU4                          <---------LBD16                <---------YAB1                         <---------REM1(2)              --------->YAB1                     <---------ARR11(1)              <--------HAHB4                     <---------ARR11(3)      <----------DOF2                            <---------ARR14(2)                            <-----      <---------DAG2                             --------->ARR14(2)                            ======   <-----------GT1 <-----------GT1           --------->LBD16  --------->ANAC58                 <----- --DOF2      --------->ICU4      <----------DOF2 <-----------ARR10                          --------- ------------------->WRI1    ------>ZmHOX2a(1)  <---------CCA1(2)---------->DOF2    --------->TOE2(3) ---------DOF2<---------ICU4 <---------CCA1(2)<---------ALFIN1--------->ANAC58      --------->TOE1(3)   cctttaaacttttcgattattattccatttcctatctttttgtttcccccaaatcttttcacggaagcaaagaatacaattccaaaccctaatcccgatc  9295900                                                     <---------ICU4                                                     --------->YAB1                                                    --------->ICU4                                         ----------->RAV1(2)                                         <---------At4g35610                                       <---------ALFIN1               <---------MYB52(1)     --------->MYB46(3)               <-----------HVH21     <------ZmHOX2a(2)    <---------YAB1         ===================================HOX2a_HOX2a --------->YAB1    <----------DOF2                 <---------ARR14(2) --------->ICU4                            <--- -ZmHOX2a(2)  --------->LBD16       --------->ARR14(2) <---------YAB1                           <---- ===============HOX2a_HOX2a      ------>ZmHOX2a(1)--------->YAB1                                <---- ----ATHB12 <---------LBD16 --------->GLK1(1)    <---------YAB1                               <------ >LBD16  ------>ZmHOX2a(1)  <---------GLK1(1)<---------GLK1(2)       <-----------GT1       --------->AHL20(2)   atccgtctttcctctccggtcagtcttccgatttcctcgatccacctgattttcattatgattatacatatatactttcttctcgctcgtcaattttttc  9296000    <---------ANAC46  <---------ANAC46--------->ATHB12                                                 <---------ANAC58 ----GAMYB      <---------WOX13(1)             <---------YAB1       <---------KAN4(2) -----ANAC58  <<<<<<<<<RAP2.2     <---------TOE1(3)               <------ZmHOX2a(1)<---------ANAC46 -----ANAC58 <---------YAB1       <---------TOE2(3)      --------->At4g35610       <---------ANAC58 -----GT1    <---------TOE2(3)   <-----------RAV1(2)   --------->YAB1        --------->CCA1(2)     <-   gttgctgtgtgaatttagattgatttgttttggattcaggtttcaaaatatgagtaatcagaagaagaggaattttcagatagaggcgtttaagcatcga  9296100                                                    <------ZmHOX2a(2)                                                --------->SPL7              <---------ARR14(2)              --------->TOE1(2)              --------->ARR14(2)             <---------ANAC58         ------>ZmHOX2a(2)                   <---------ANAC58        <------ZmHOX2a(2)            --------->GLK1(2)               --------->YAB1       <---------ARR14(2)           <---------ARR14(2)              <---------ATHB12       <---------PCF2               --------->ARR14(2)         <-----------GT1                      <       --------->ARR14(2)           <---------GLK1(2)       --------->ARR14(2)   <---------ZAT18 ---- --------MYB46(3)                  <---------At4g35610--------->WOX13(1) <---------ARR11(3)      <---   gtcgttgtggatcccaaatacgctgataaaacttggcagattcttgagcgtgcgatccatcagatttacaatcaagatgctagcggtctcagtttcgaag  9296200  Previous    Next  AGI:  At1g26830.1    Description:  ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A); protein binding / ubiquitin-protein ligase. similar to ATCUL3B/CUL3B (Cullin 3B), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G69670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81888.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48405.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72935.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Cullin homology; (InterPro:IPR016158); contains InterPro domain Cullin repeat-like (InterPro:IPR016159); contains InterPro domain Culli Range:  from: 9295723    to: 9298528    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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