Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <----------DOF2                                                                             <---------ARR11(3)                                                                           <---------AHL20(2)           --------->ARR11(3)                                             --------->AHL20(2) <---------AHL20(2)                                                   --------->ARR11(3) --------->AHL20(2)                                                   <---------ARR11(3) --------->AHL20(1)          --------->YAB1                           --------->ICU4                - -------->AHL20(2)         <-----------GT1                            <---------AHL20(1)        ----- ->At4g35610           <------ZmHOX2a(1)                              --------->AHL20(1)  --------->TOE2(3) --At4g35610          <---------YAB1                       <------ZmHOX2a(1) --------->ARR11(3) <----   aaaaaaattgaaggaacttggattaggattaacatcatgaactagtttcaaactgatacaaggactagagaaaatattaaatctttagcatttcttaaca  9274900         --------->ARR11(3)  <---------AtMYB61                                        ----------->HVH21  <---------TOE2(3)        <-----------RAV1(1)                              ========================= --------->DOF2            --------->ALFIN1                            --------->GLK1(2) ---------->AGL15         <-------MYC3                            <------ZmHOX2a(1)--------->TOE1(2) -----------AGL15         ------->MYC3<---------ZAT6     <------ZmHOX2a(1)  <------ZmHOX2a(1)   aataaaggtaagaccatgaaacataccatgtgtggtcgaagtgatagagaagaagacgaggaagacgaggaagaatcaggaagaacatgggacgaagaag  9275000                 ----------->GT1                    --------->ARR11(3)              --------->MYB52(1)                    --------->GLK1(2)             --------->ARR14(2)                     --------->ARR14(2)             <---------ARR14(2)                     <---------ARR11(3)        <---------YAB1                       <---------LBD16      --------->YAB1                       <-----------GT1     <------ZmHOX2a(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------ATHB12    --------->ARR11(3)        --------->ANAC58      <---------ARR14(2)    ------>MYB46(1) ===========HOX2a_HOX2a       --------->ANAC58 --------->LBD16            ------>MYB83          -----   agtatggatcatgagaaaccggtgtaattgtccagccaaacaatttaaccggagtatctctaacttgagacataccaatctttgaagacataagacagaa  9275100                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           --------->AHL20(2)                                                                                      <------MYB83                                                                                      <------MYB46(1)                                                                                      ----------->GT1                                                                                     --------->MYB111(1)                                                                                     --------->MYB59                                           <---------AHL20(2)                        --------->MYB46(2)                              <---------ANAC55(1)                                    --------->MYB111(2)                              --------->ANAC55(2)                                   <--------P <-----                              <---------ANAC55(2)                                   <---------MYB55(1)                              <---------ANAC46                                   <---------TOE1(3)       <---------ANAC46  <---------ZAT6  <----------DOF2                         <---------TOE2(3)  - ----->DOF2       ----------->ARR10  --------->KAN4(2)                           <---------AtMYB61  <   aagaagatggagtatgagattagatttgtgttatgtgtttattctttatttgaggtctgagacaagagtatgtataagaggctgaggttggtattaaatt  9275200                                                           <---------At4g35610                                                           --------->At4g35610                                                           --------->ZAT2                                                        --------->TGA2(2)                                                       <-----------TGA1      <------ZmHOX2a(2)                                <-----------HVH21     <-----------HVH21                                --------->ANAC46 ----->YAB1                                           --------->ANAC55(1) -----AHL20(2)                                        --------->bZIP60(2) ---->AHL20(2)                                        --------->ANAC58 --->AHL20(2)                                         --------->TGA1a >AHL20(1)                       ----------->GT1      <---------O2 >AHL20(2)                 =====================================bZIP_DOF -AHL20(1)           --------->ANAC46                 --------->ANAC58                         <----- -AHL20(2) --------->ANAC46---------->DOF2            --------->O2                            ------- ----AHL20(2)        --------->ANAC58                 <---------TGA1a                         <------ -------->MYB52(1)   --------->ANAC58             <-----------GT1                          ---------- -----------GT1    <---------ALFIN1       ----------->GT1  <---------ZAT2       --------->CCA1(2)   aataacggatcacacagagccacaagccataaagacagagaaaatggagaaattacacgtcagcttagagagggacatgaagagatgagagagccacatg  9275300                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                               ======================                                                                               <----------DOF2                                                                            ------>NtERF2    ========                                                                      --------->CCA1(2)      --------                                                                     --------->ARR14(2)      --------             <---------DAG2                                          <---------ARR11(3)      --------         --------->ZAT18                                             --------->ARR11(3)    <---------ALFIN1     --------->DAG2                                                  --------->ARR11(1)  <---------At4g35610    ---------->DOF2                                <-----------HVH21 <---------GLK1(2)   --------->At4g35610 ------RAV1(1)   <-----------GT1                  <----------DOF2    <---------ARR14(2) --------->ANAC46 >MYC3   <---------ZAT18                     ------>ZmHOX2a(2)     ----------->ARR10 <-----------HVH21 -MYC3  --------->ALFIN1  <----------DOF2  --------->ARR11(3)    ==================================== ->RAV1(1)   <----------DOF2         <----------DOF2             ---------->DOF2  <------------CBF   ttgcaaaaaagtgggctttttgctatctcttttcatgctctttttgatctctctttcagtgccactaaaaagatttgcctcctttattgtcagccacgtc  9275400  <---------AHL20(2)  --------->AHL20(2) ->O2<---------------AtSPL8 --O2--------------->AtSPL8                                                        ------>NtERF2 --TGA1a                    <-------TEIL                                          --------->RAP2.6(2) ->TGA1a                 --------->KAN4(1)                                      --------->At4g35610 ->bZIP60(2)             <---------KAN4(1)           ---------->DOF2            <---------At4g35610 ==bZIP_DOF             ---------->TaMYB80           --------->YAB1             ----------->RAV1(2) ===========================bZIP_DOF                 <--------ATHB1             <---------ZAT2 ->ANAC58               <---------KAN4(2)           --------->ICU4              --------->ZAT2 ->ANAC58           --------->HSFB2a(2)             <---------ATHB12           ------>NtERF2 ->ANAC46        <----------DOF2  ----------->GT1   <---------ATHB51          <-----------RAV1(2) ==bZIP_DOF   --------------->AGL15             ------------>CBF         ---------->DOF2      -------   tcattaaaatgtacaacttcttttggaatattcatacagaaaattagaaatacaataatgcgaaaacatttacaaaaatgccagctgccatacatcagtt  9275500                                                                                             --------                                                                                             --------                                                                                             <-------                                                  --------->ARR11(3)           <------------CBF                                                  <---------AHL20(1)         <---------AHL20(1)                                                  --------->AHL20(1)         --------->ARR11(3)                                                <---------ARR11(3)           <---------ARR11(3)  <---                                <---------ANAC46--------->AHL20(1)           --------->AHL20(1)<-----                    ------------>CBF            <---------AHL20(1)       --------->TOE2(3)  --------- -->At4g35610      >>>>>>>>>>>>>>>>>LFY<---------------AtSPL8       <---------KAN4(2)       <--------   caaaatgctatattacagatgttccaatgtggttttgtgaatgagtacaaaatattttggtttctatacgaataaccaaaatattgactactaaaaaaat  9275600        <--------P  <---------ANAC58  <---------ANAC58 ->AHL20(1) ->AHL20(2) --AHL20(2)              <-----------GT1 --------RAV1(1)     --------->ARR11(3)                          <-----------GT1 -------CBF          <---------ARR11(3)                --------->YAB1 >AHL20(2)--------->ANAC58                            <---------YAB1                 --------->RVE1(1) -AHL20(2)--------->ANAC58      <---------YAB1      --------->YAB1          --------->AHL20(2)     <-   tgttgctagggtaagcaaaatcagatattacaatatgaataaccaaaacatcgattataaaaactaatttctatacaaataactaaaatatcgataacta  9275700                                                                           <---------ARR11(3)                                                                     <-------GAMYB                                                                    <---------MYB46(3)                                   <---------YAB1                   ----------->GT1                                <---------ATHB12                    --------->MYB55(2)                              --------->YAB1                       --------->ALFIN1                              --------->WOX13(1)                   <---------AtMYB61                     <---------O2<---------ICU4                 <---------ANAC58                     <---------TGA1a        ------>ZmHOX2a(1)   <---------ANAC58            <--------       <-----------HVH21     --------->MYB46(3)                 <---------ANAC46    --------->DAG2 <-----------GT1     --------->TGA1a<---------ICU4             <---------LBD16     ---------->DOF2 ----------GT1       --------->O2--------->YAB1           <---------YAB1   --------->ARR11(3)   <----   ttttctccttgtcatccctagcgacgagacaacaatcatcattctcctcgagatgatatcaagattgcggtggttaaaatcttggtaaagtgctatgttt  9275800  Previous    Next  AGI:  At1g26790.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF1.3 (DOF1.3) [Arabidopsis Thaliana] (GB:Q9LQX4); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G69570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48370.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 9273844    to: 9275299    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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