Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->YAB1                 --------->YAB1          <---------ARR11(3)          <---------ARR14(2)          --------->ARR11(3)                           --------->ANAC58          --------->ARR14(2)                ----------->RAV1(2) --->ANAC58   --------->WOX13(1)            <---------AtLEC2 --->ANAC58<------ZmHOX2a(2)                <---------ANAC58 --->ANAC46--------->CCA1(2)---------->DOF2 <---------ANAC58                           ------->GAMYB -->LBD16 --------->AGP1 <---------ATHB12   <---------ANAC46  <-----------GT1     --------->At5g28300 ---->TaNAC69(2)<---------ATHB12        <----------DOF2--------->ANAC58       --------->ANAC46      <   aaactcacttaagatccaatcagacaaatcaaaagctccagtctttgcctgaaactcaagcttcttacatttctctatatacacagtaacagtctccaag  9249500                                                                                   <----------DOF2                                                                                  --------->TOE2(3)                                                                                  --------->TOE1(3)              <---------ARR14(2)                                       --------->YAB1       <---------ANAC58                                --------->ARR14(2)    <----------DOF2       <---------ANAC46                                <---------ARR14(2)    <---------DAG2       <---------ANAC58    <---------RAP2.6(3)  ---------->DOF2      --------->ANAC46 --------->ZAT6      ---------->DOF2        --------->ANAC58         --------->AtLEC2 <-----------GT1------>ZmHOX2a(2)           --------->ANAC58         --------->ANAC58 ---------YAB1--------->ARR14(2)          ---------->DOF2            --------->ANAC58   ---------->DOF2   ttatcactcgcttgtggatcgagcaaagccgttttaaaacattccaaagccaaagagtatttgctcaatccaagcaaaactttacctttacaaagaagag  9249600                                                          --------->GLK1(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                         --------->CCA1(1)                                                    <---------HSFB2a(2)                           <---------ANAC58         --------->HSFB2a(2)                        ------                           <---------ANAC58     <---------ANAC58                   <---------At4g35610                 >>>>>>>>>>GATA-1          --------->ATHB12                        --------->At4g35610              <---------HSFB2a(2)          <---------ICU4--------->RVE1(1)         --------->ZAT2              --------->HSFB2a(2)--------->YAB1 <---------ANAC58                   <---------ZAT2<---   tcttgaaatgagtcttctcgatttcaagtgcttgatcacaatccctcattgcttccaaaaaatctcgtagcctagctcttgcctcagctcgattacatag  9249700                                                      ----------->RAV1(1)                                                <---------DEAR3(2)                                               --------->ETT(1)                           --------->WOX13(1)<-----------HVH21                    <---------At4g35610    --------->LBD16                    --------->ZAT2       ------>ZmHOX2a(2)                    <---------ZAT2       <---------LBD16                   <-----------ARR10    <------ZmHOX2a(2)                                          --                 --------->LBD16       --------->ARR14(2)                                        ----                <---------HSFB2a(2)  --------->LBD16--------->MYB46(3)       --------->LBD16    <----                --------->HSFB2a(2)<---------LBD16<---------ARR14(2)      ------>NtERF2         <----               <---------LBD16   --------->ARR14(2) ------>ZmHOX2a(2)   <---------ANAC58        <----  --------->MYB52(1)--------->At4g35610<---------ARR14(2)               <---------ANAC58    ------->TEIL ---->DOF2  <---------GLK1(1)    --------->GLK1(2)--------->ARR14(2)<---------ANAC58        <-------- -------ID1 --------->GLK1(1)    <---------ARR14(2)<------ZmHOX2a(2)<---------ANAC58 <------ZmHOX2a(2)   agccaaacagagagatttccggagcttagcaatcgaatccggatccgggtcggatccaccagtacttgagacttgcctccgagagagatcgatgaactcc  9249800                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       --------->ARR11(3)                                              <---------MYB52(1)                                             <-------GAMYB                                        --------->HSFC1(2)                                        <---------HSFB2a(1)                                        --------->HSFB2a(1)    <---------ARR11(3)       <---------YAB1                   --------->ZAT2 <---------ARR11(3)     <----------DOF2                    <---------HSFC1(2)   --------->ANAC58          <---------CCA1(2) ------->REM1(2)                        --------->At4g35610  --------->ANAC58      --------->PCF5 ----->LBD16                 <---------HSFB2a(2)       <---------AGP1           --------->ALFIN1 -----ANAC46                 --------->HSFB2a(2)      <---------CCA1(2)  <---------At4g35610 -----ANAC58                 <---------HSFC1(1)   <----------DOF2        --------->At4g35610 -----ANAC58                 --------->HSFC1(1)  <---------ANAC58      --------->MYB46(3)          -- -GLK1(1)    <---------GLK1(2)     >>>>>>>>>TBF1 <---------ANAC58    ----------->RAV1(1)   <---------CCA1(2)   gtgtaaacttttatagattcttcccattcttctcgaagaagaagctccgttgctttagatctcaagctctgcaacagctccagtggcccgtctctatctt  9249900                                                       --------->DAG2                        <-------                                               ----------->GT1                   --------->ANAC55(2)                                           --------->WOX13(1)                    --------->ANAC46                                         <------ZmHOX2a(2)                       --------->ANAC58   -                                         ------------>CBF                        --------->ANAC58   <                              *TSS<----------DOF2     ---------->DOF2          <-----------GT1      <                   =============================HOX2a_HOX2a                  <---------WOX13(1)------ ---->ZmHOX2a(1)   ------>ZmHOX2a(1)    --------->ARR11(3)              <----------DOF2 ----------->GT1   cctctagctcgaattgctctcctctcattgctatttctttgagatcaattagtaaaaaaagttttggattttggctttgatttacgaaatttgtgaattg  9250000                                <-----------GT1                              --------->WRKY18(1)                              --------->GLK1(1)                             <-----------HVH21                              <---------GLK1(1)                        ----------->HVH21                             <---------GLK1(2)                       --------->TGA2(1)                             <---------ARR14(2)                      --------->bZIP60(1)           -- -----CBF                    --------->ARR14(2)                      <---------bZIP60(1)         ---- -------->ANAC55(2)     <-----------HVH21    --------->ZAT6   <---------ALFIN1                ------- ---------------AGL15  ------->GAMYB<----------DOF2        --------->PCF2  ------->GAMYB     <------- ---------ANAC55(2) --------->MYB52(1)     <-----------GT1---------->ID1--------->MYB52(1) --------->YAB1 ----->GT1          <-----------GT1<---------DAG2 <---------TOE2(3)  <---------REM1(1)  --------->TOE2(3)   ttacttaaatggtagagttttgtaacggtcggatttgccttttttttacactatggttttgtccccacatgatgtaacggtcatgaactacataaataat  9250100                                      <---------ICU4                                  <---------AHL20(2)                      ----------->GT1                            <---------At4g35610                        <---------ICU4 ------->At4g35610      <----------DOF2   <---------ZAT18          <-----------GT1 ----->YAB1     <-----------GT1   --------->AHL20(2)              --------->AHL20(2) -->YAB1    --------->GLK1(2)    <---------WOX13(1)         --------->YAB1--------->YAB1        ----- --AHL20(2)<---------GLK1(2)--------->At4g35610             <-----------GT1                     <----   cagcaaaaattcagaatttgacattactttagctgattaattagtccattctattaaacttataacaatttactaattgtaatttagttagccatatgag  9250200                                      --------->ANAC46                                      ------>MYB83                                      --------->ANAC58                                      --------->AtLEC2                                      --------->ANAC58        --------->MYB46(3)   <--------HAHB4       <---------At5g28300   --------->YAB1      <-----------GT1       <---------YAB1---------->DOF2                   ----------->GT1     <-----------GT1      <---------CCA1(2)--------->DAG2     --------->ARR14(2)                   <- ---->At4g35610  --------->TOE2(3)    ------>MYB46(1)         <---------ARR14(2)                   <- -----At4g35610 --------->YAB1--------->TOE2(3)   <----------DOF2    <---------MYB52(1)<---------ZAT6   ctgttttttaaccgcttaacataaatgtgtatcattaaccaagcaaaagtgtctttcacaagtgaatccctgtttgttttgtaaaactagtgatcacatt  9250300                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                            <---------ALFIN1                  <-----------ARR10              --------->ANAC58             ------>MYB83                       --------->GLK1(2)              --------->ANAC58             -------->P                        <---------GLK1(2)        --------->MYB46(3)                 ------>MYB46(1)                --------->YAB1        ----- --------ANAC58                    <---------ICU4      <-----------GT1<---------YAB1           <----- --------ANAC58                    --------->AtMYB61 --------->YAB1 --------->YAB1           --------   gccttgagaaacagccaagcctatacctgttcttccaccattaccaacacctctataatacaatctccattgatgatcagaatctccatccatctcaatc  9250400  Previous    Next  AGI:  At1g26760.1    Description:  binding. similar to ASHR2 (ASH1-RELATED PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT2G19640.2); similar to ASHR2 (ASH1-RELATED PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT2G19640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69710.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 9248139    to: 9249930    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g26761.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO68448.1); contains domain SSF75005 (SSF75005) Range:  from: 9250211    to: 9251631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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