Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------AHL20(2)                                                                                       <---------AHL20(1)                                    ------>ZmHOX2a(1)                                  --------->AHL20(2)                                <---------ARR11(3)                                  --------->YAB1                                --------->ARR11(3)                           --------->DAG2                               --------->GLK1(1)                <---------ATHB12   --------->ICU4                               <---------GLK1(1)    --------->At4g35610     ---------->DOF2             <----------DOF2  --------->ARR11(3)    <---------At4g35610---------->DOF2 <---------AHL20(2) -------ARR14(2)              <---------ARR11(3)  <-----------GT1--------->YAB1    <---------YAB1   - ------>ARR14(2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->MYB46(3)----------->GT1      <-   aatactcttgattttcttttaaacaaatattagatatcctacatgaaaaattttagctctcaacaaatcaaaataaagaaaagttataattaatttggaa  9178000                         --------->ANAC58                   --------->AHL20(2)                   --------->ATHB51                   -------->ATHB1                   <--------HAHB4                  <---------ATHB51                  --------->ICU4               <---------YAB1          <---------ICU4 --------->ANAC58                        <---------RVE1(1)         --------->AHL20(1)                                     --------->ARR11(3)         --------->AHL20(2)                          <---------YAB1         <---------AHL20(2)                        <---------AHL20(2)            --------->TOE2(3)        --------->AHL20(2)                  --------->ZAT6      <---------ARR11(3)        <---------YAB1 ---------->RAV1(1)<---------AHL20(2)     <-----------GT1       <---------GLK1(2)--------->TOE1(3) ---------ID1<-----------GT1     --------->AHL20(2)--------->AHL20(2)         <-----------GT1   tacaacaaaaaaaaattacaattatttaagcaaatttttatatttaacagtatttaaaattgactagattttttgttgagtaaccttatattttcatttg  9178100                                                                         <----------DOF2                                                                         <---------DAG2                    <---------ARR11(3)                                <---------AHL20(2)                    --------->ARR11(3)                  --------->ANAC55(2)             --------->TOE2(3)                          <---------ANAC55(2)          <-----------GT1                    <----------DOF2 --------->ATHB51        --------->AHL20(2)     <-----------GT1   <-----------GT1      <-----------GT1   <---------ATHB12--------->YAB1            <---------DAG2 <---------YAB1   --------->YAB1       <--   atcaaatcaatttaacatcaaatatcatccatataacttctcacttactttataccatacgtataattgaatttacttttcatatttgtttttgtctagc  9178200                                      <---------YAB1                                      --------->AHL20(2)                      <----------DOF2                      ----------->RAV1(1)                                     <---------DAG2     <---         --------->At4g35610          <---------AHL20(2)                   <-----------GT1      <----         <---------At4g35610<---------MYB46(3)                     <---------AHL20(2)          ------        ------->TEIL --------->MYB46(3)  <---------YAB1            --------->AHL20(2)          <-----    ------->TEIL   <-----------GT1--------->YAB1            <----------ID1---------->ID1  <---------ANAC46 -----TEIL      --------->YAB1   <---------YAB1 <----------DOF2    <---------AHL20(1)<----------DOF2   ttcatgtatgcatctcaatattaacaacagtggttatcatattattatttcttttgtctaaaaaaacaaaaaatttgtcacttttttctttggctcggat  9178300                                    --------------->AtSPL3                                    <---------------AtSPL8                             ----------->TBP                           ------>ZmHOX2a(1)                                                     <---                           --------------->AGL15                                                 <---        --------->MYB59    <---------------AGL15                                                <----   --------->ARR11(3)     <-----------------AGL3                                             <-------   <---------ARR11(3)     ----------------->AGL3                                    <----------DOF2 --------RAV1(2)          <-----------------AGL2                                <----------DOF2<----- --ZmHOX2a(2)             ----------------->AGL2      <---------DAG2      <---------DAG2<----------DOF2 --->ARR14(2)         <----------DOF2                 <----------DOF2     <----------DOF2  <---------ANAC58 ----ARR14(2)    <----------DOF2    --------------->AtSPL8       *TSS   ------>ZmHOX2a(1)  <---------ANAC58   cagaagattttaggtctctctttcctttcctatatatagtagtaccccttacatagctttttccacttgcactcctctttttctttctttctttcttgtt  9178400 ---MYB83                                                     ------->TEIL ---MYB46(1)                                                  <-----------GT1 -----AtMYB61                                          --------->AHL20(2) ----RAV1(1)    <---------YAB1                   --------->ANAC46 ---P       <----------DOF2            <------ZmHOX2a(2)   --------->ANAC55(2)                 ------   ggtctctcttacttctttcttattcatctaaaacaatttcgatccatttacacataaatatatgtaactggccgtagaagaaacacattgaaggaagaga  9178500                                                                ----------->GT1                                                               <---------WOX13(1)                                                            --------->ICU4                                                            <---------YAB1                                                          --------->YAB1                                                         <---------YAB1                                                         --------->ICU4                  ----------->TGA1     --------->ICU4  --------->YAB1                --------->YAB1         <---------YAB1 --------->ICU4                           ------                <---------ICU4       --------->YAB1   <---------YAB1                  ------>NtERF2               --------->ICU4       --------->ICU4  <---------ICU4                 --------->At4g35610               <---------ATHB12     <---------YAB1  --------->YAB1                 <---------LBD16       <------ZmHOX2a(1)       --------->YAB1      --------->ICU4          <-------TEIL       <------ --->CCA1(2) --------->YAB1 ---------->DOF2        <---------YAB1         --------->AtLEC2    -------   tggctcataggagattaatcatgacgatgacaaagatgatgatgatggtgaccatgatgatgatgatggataaaacatgcatatgtgcggacatttccag  9178600                                   ----------------------->TaNAC69(2)         ---------->DOF2   --------->ARR14(2)                  --------->ZAT14 --->LBD16                 <---------ARR14(2)          ------>ZmHOX2a(1)                         <--- ---HSFB2a(2)         <----------DOF2     <----------DOF2   ------>ZmHOX2a(1)  <----------DOF2  <---- -->HSFB2a(2)   <----------DOF2  <----------DOF2  --------->GLK1(1)     <---------ALFIN1       <-----   aggcagttttccaaagggctttgtctttggaactgcttcttcggcttttcaggtctcctctcctctccagtctcccactctctttgtttttgtctatttt  9178700                                                             -------->ATHB1                                                             <---------ICU4                                                            --------->AHL20(1)                                                            <---------AHL20(2)  <---------AHL20(2)                                        --------->AHL20(2) <---------AHL20(2)                            --------->At4g35610 --------->MYB46(3) --------->AHL20(2)          <----------DOF2  --------->GLK1(2)  <-----------GT1     --------->bZIP60(1) ------AHL20(2)     ---------->ID1           <---------GLK1(2)   <<<<<<<<<GT-1       <---------bZIP60(1) -----YAB1         <-----------GT1      ---------->DOF2     <---------YAB1           --------->TGA1a ----AHL20(2)     <-----------GT1 <---------TOE2(3)         --------->ICU4       <-----------HVH21   tattttaatttttgagttatttatcgttttccttttaagttttaaaggaatctgaaaacaaaattattaaccacttaaaaataggtcacatcagaacaaa  9178800                                                                --------->ANAC58                                                               --------->DAG2                                                           <---------AHL20(2)                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                       <---------AHL20(2)                                                       --------->AHL20(2)                                                       --------->AHL20(1)                                                      <---------AHL20(2)                                                      --------->AHL20(2)  ---------->DOF2                                                   --------->AHL20(2)    <---------GLK1(2)          -                                                   <---------AHL20(2) --------->YAB1               --                                                  --------->AHL20(2)--------->MYB52(1)             <-                    <-----------GT1             --------->YAB1---------->DOF2                      --         ----------->HVH21                    --------->AHL20(2)--------->ANAC58                   <-  <-------TEIL     <---------YAB1            --------->YAB1--------->AHL20(2)           --------->ZAT6   taggttcacatgtgatatgtttttattctcccaatactatatagccaaaataataaataatttaaaaagcaaacagaatagccaaaactaatactattca  9178900  Previous    Next  AGI:  At1g26560.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G54570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41891.1); similar to hypothetical protein OsI_010256 [Oryza sativa (indica cultivar-group)] (GB:EAY89023.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41892.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 9178365    to: 9181822    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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