Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ------>NtERF2                       <------NtERF2                      ------>NtERF2                     --------->ANAC46                     <---------DEAR3(1)                    --------->LBD16                   --------->ANAC46                  <---------LBD16                 >>>>>>>>>>E2Fc                        ------->GAMYB                 >>>>>>>>>>E2Fe                      --------->At4g35610                 >>>>>>>>>>E2Fb                      ------>MYB83                 >>>>>>>>>>E2Fa                      ------>MYB46(1)                                -                 >>>>>>>>>>E2Fd                 --------->ANAC58                   <----------DOF2  <                 >>>>>>>>>>E2Ff                 --------->ANAC46                  <---------DAG2   <-                <-----------GT1                 --------->ANAC58                ------->TEIL   ------             <---------GLK1(1)       --------->YAB1 --------->MYB52(1)   <---------YAB1        <-----            --------->ARR14(2)      <---------ZAT6 --------->MYB46(3)<----------DOF2    ----------->RAV1(1)     <---------At5g28300--------->DEAR3(1) ------->GAMYB            <---------ANAC58   --------->ANAC46 >DOF2      <---------ARR14(2)    ----------->GT1  --------->AtMYB61<---------ANAC58   <---------ETT(1)   agggacttacagtggattttcccgcgccgagatagccagtgataacagacacaccaactgaaacagtatcgcttgatgagtgaacctttccgacagaaac  9165500                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                  <--                                                                                                  ---                                   <---------ICU4                                               -----                           --------->ARR14(2)                                                <-------                           <---------ARR14(2)                                        ---------->TaMYB80                         --------->ABI4(2)                                           <---------ARR14(2) --------->LBD16         <---------MYB46(3)                                          --------->ARR14(2) -------->HSFB2a(2)      --------->MYB55(2)                   <---------GLK1(2)    <---------MYB52(1) ---------HSFB2a(2)     --------->ALFIN1                     --------->At4g35610  --------->LBD16---- --------LBD16         <---------MYB52(1)                    <---------At4g35610<---------LBD16 ----- --->HSFC1(2)      --------->MYB52(1)   --------->At4g35610  <---------ZAT2   --------->DEAR3(1)----- ----HSFC1(2) --------->MYB46(3)   --------->YAB1  <-----------GT1        <---------At4g35610--------   atccggatggatttgaacagccatcggtggttcttcatcatcatcttccattttcactccctcagcttcttccttcagcatcgccggtatatgcagagac  9165600                                                                <------MYB83                                                                ----------->GT1                                                      <------MYB83                                                      <------MYB46(1)   ---------->DOF2            <---------At4g35610     <---------DEAR3(2) -------->At5g28300           --------->At4g35610    --------->MYB59 -------->LBD16               <---------ZAT2       <---------MYB52(1) --------ANAC46             <------NtERF2        <------MYB46(1)<------MYB46(1) ----NtERF2         --------->CCA1(2)            <------MYB83<---------MYB52(1) ------>RAP2.3(1)  <---------ARR14(2)            <---------DEAR3(2) ---->ANAC58       --------->ARR14(2)           --------->MYB59<---------AtMYB61 --ARR14(2)    ----------------->AGL3       <---------MYB46(3) --------->MYB59 -->NtERF2     <-----------------AGL3       <------MYB83<---------MYB52(1)                          < ---->ANAC58--------->GLK1(1) --------->ZAT2<------MYB46(1)<------MYB46(1)                     ------ ---->DEAR3(1) ----------------->AGL2    <---------ANAC58  <------MYB83                   --------->TOE2(3) ->ARR14(2) --------->At4g35610          <---------ANAC58 --------->MYB59<-----------HVH21--------->TOE1(3)   gccgtaaaagacagagctccatatatgggccgagctcacattagcttggttcggttcggttcggtttggttaaaatgtcaaacgactcaaaaccctaatt  9165700                                      ------->TEIL                                 <---------ANAC58                         --------->ZAT2                         <---------ZAT2--------->At4g35610      --------->ARR11(3)                         --------->At4g35610                    <---------ARR11(3)            --------->TOE2(3)    <---------ANAC58       <---------ARR11(3)  --------->MYB46(3)  ------>ZmHOX2a(1)<---------At4g35610  ---------->DOF2 -----------GT1     XXXXXXXXXXXXXXXXXXXXX>MIR4221     --------->ANAC58                 ---------->DOF2 --->ICU4<---------GLK1(2)    <---------GLK1(2)       --------->ANAC58       <----------DOF2   tttaacaaacaaattcttagtctcctctgctcgattcttgcatctgagagaagagcaagaactaaagttctctcgttgtcttttgttttgaaagagagca  9165800                                              <---------TOE1(3)                                              <---------TOE2(3)                                       ----------->GT1                                      <---------TOE1(3)                                     ---------                                      <---------TOE2(3)                                *TSS ---------                                 ------>ZmHOX2a(1)              <---------MYB46(3)  ---------->DOF2        <----------DOF2     <---------At4g35610              <----------DOF2     <------ZmHOX2a(1)    ---------->ID1          --------->At4g35610----------->GT1  ----------->GT1 <----------ID1  -----   ttttttggccctttagtctccatttctctctgctccttctaaggttataaggttttttttagtctttggttaaacgatgggaaggacaaagaaacctcaa  9165900                              ---------->DOF2      ------------>CBF                      ------------                           ----------->RAV1(1) --------->ANAC58              --------->ARR11(3)                        --------->ANAC58       --------->ANAC58 <---------ANAC58    <---------TOE2(3)                    --------->YAB1             <---------ANAC55(2)           <---------ARR11(3)       --------->ICU4   --------->ANAC46       ----------->GT1  <---------ANAC46    <---------TOE1(3) >TOE2(3)          <---------YAB1  <----------DOF2<-----------GT1           <---------GLK1(1)  <----- >TOE1(3) --------->ICU4--------->ANAC58   ----------->GT1      <---------ANAC58<----------DOF2------ ----->DOF2--------->YAB1  --------->RAP2.6(2) --------->ANAC55(2)          <---------CCA1(2)  <-----   aagtttgcagtaatgaagatgatgataagccacaaagctttgaaacagtaagtaacaattctacttccttgaaatttgatatctttaaggtttgtttact  9166000                           --------->ARR14(2)                           <---------ARR14(2)                               --------->ANAC58                           --------->GLK1(2)                    <---------HSFB2a(2)                --  --------->ANAC55(2)    <---------HSFC1(2)                     --------->LBD16                   ---  <---------ANAC55(2)    <---------HSFB2a(1)            <---------ZAT14     --------->ANAC58   <----- ----------->TaNAC69(2)  --------->HSFC1(2)             --------->ZAT14------->MYC3          -------- ----ANAC58              --------->HSFB2a(1)       <---------ZAT14     <-------MYC3          -------- --->ANAC55(2)         <------ZmHOX2a(1)          <---------MYB59     <---------ANAC46       -------- ----ANAC58          --------->ALFIN1          <------ZmHOX2a(1)--------->HSFB2a(2)  <-----------GT1   tgatacttatcttcagttacaaggaggaggttctgaatccaaacaagaaggacctcactgaacttccgagaaacgtgtaagctatatttgccctccagca  9166100       --------->HSFC1(2)       <---------HSFC1(2)       <---------HSFB2a(1)       --------->HSFB2a(1) ------->DAG2           ------>ZmHOX2a(2) ------>ICU4          <---------ARR11(3) ------------AGL3     --------->ARR11(3) ->ANAC58             --------->ARR14(2)                  <---------AtMYB61 --->RAV1(1)          <---------ARR14(2)      --------->ATHB12  <---------ANAC46                 <--- ->ANAC58            <---------CCA1(2)       <---------YAB1  <---------AtMYB61           <-----------HVH21   aaaattggtaccttcgtgattttggatcttcttagaaactttggattttgatttgtgattttggtggtgttttgtatcagtccaagtgttccttcagggc  9166200                                                                                         --------->ANAC46                                                                                        <---------ZAT14                                                                                        --------->ZAT14                                                                                 --------------->AtSPL8                                                                                 --------->DAG2                                 --------->MYB52(1)                              <---------TOE2(3) --                                 -------->P                                      --------->MYB59-----                               ------>ZmHOX2a(1)--------->ARR14(2)               <---------------AtSPL8                            ------>ZmHOX2a(1)   <---------ARR14(2)               --------------->AtSPL3                        --------->ARR14(2)    <---------MYB46(3)           --------->LBD16    <------                      <------MYB46(1)     <---------AtMYB61               --------->HSFB2a(2)--------  <----------DOF2     <------MYB83<---------LBD16                         <---------HSFB2a(2)-------- -------DOF2         --------->MYB59--------->LBD16                      ----------------->AGL3------   ttttcttttctcacaactctagtttggttcctccttaccgggttttggtggataccaatttcatcaacttctctatccagaataaggtactacacaatca  9166300                                  <---------AtLEC2                                 <-------TEIL                             <---------KAN4(2)                          --------->LBD16                         --------->ANAC46                           <----------DOF2 ------->AHL20(2)       <---------LBD16                    <-------GAMYB                      ------- ---->WOX13(1)        --------->ARR14(2)                  <---------MYB46(3)                  <------ ---ATHB12            <---------ARR14(2)        --------->RVE1(1)<---------ARR11(3)      <---------WOX13(1) ->ANAC58            ----------->HVH21      --------->AHL20(2)   --------->ARR11(3)    --------->ATHB12 ->ANAC58        --------->At4g35610      ----------->GT1<---------TOE2(3)            <---------YAB1 --->AHL20(2)    <---------At4g35610    ---------->DOF2  <---------YAB1           --------->ARR11(3)   attacattatctaaaatagagctgtaaccggaatgtgcatgataaagaaaatatcgattttggttgagttctttttgtcttgaataacttgattgaaatc  9166400  Previous    Next  AGI:  At1g26520.1    Description:  similar to PRLI-interacting factor L, putative [Arabidopsis thaliana] (TAIR:AT1G15730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41893.1); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495) Range:  from: 9163233    to: 9165887    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g26530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39702.1); contains InterPro domain Protein of unknown function DUF652 (InterPro:IPR006984) Range:  from: 9165877    to: 9167349    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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