Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ---------->DOF2                                                          <---------AHL20(2)        <---------WRKY38(1)                                                    <---------TOE1(2)   --        <---------WRKY12                 --------->LBD16                      ------>ZmHOX2a(1)   ---       --------->WRKY18(1)              --------->HSFB2a(2)              <---------ZAT2          ----      <-----------HVH21            <---------ICU4                        --------->At4g35610  -------     --------->At4g35610          <---------YAB1                         --------->ZAT2      <-------     <---------At4g35610        --------->YAB1                           <---------At4g35610 --------    --------->MYB59      <---------ICU4 <---------HSFC1(1)             <---------WRKY38(1)  <--------    >>>>>>>GRF7  <-------TEIL  --------->ICU4   --------->CCA1(2)      <---------WRKY12   <---------SPL7 <-----------HVH21  --------->AtLEC2    <---------HSFB2a(2)          <-----------HVH21<-----------GT1   ttttgtcaggtcaaagagtttcatgcatcagtactgatgattccagaaatatatgcatagcaagtgaagatggtcagctcctagtttattgccatccgga  9113500  --------->ZAT14 --------->GT1                                                       <------MYB46(1) ------>DAG2                                                         <---------MYB46(3) ------>DOF2                                                         ----------->GT1 -->LBD16                                                            <------MYB83 --HSFB2a(2)            ----------->GT1<---------ARR11(3)         <---------ANAC58 ->HSFB2a(2)    <---------ATHB12       --------->ARR11(3)         <---------ANAC58                 <- -LBD16       --------->WOX13(1)   ---------->DOF2 <---------ICU4 <---------ANAC46   <---------WRKY12   aaagtaaactcaaaatcaatcaaggagggtaacaacaaaaagatgttttgccaaaatgacttcaattggcttggttacatttttaagtcaactaagtttt  9113600                                                                                                  ---                                                                                                  <--                                                                                                <----                                                                                           <---------YAB1                                                                                         --------->YAB1                                      --------->HSFB2a(1)    <---------------AtSPL8     <---------YAB1                       <---------ANAC58                   --------->AHL20(2)            ----------->GT1          <----------DOF2             <---------HSFB2a(1) --------->AHL20(1)          --------->YAB1 <---------ANAC58      <---------ANAC46          ----------->GT1                     --------->ICU4 <---------ANAC58      <---------ANAC58 <-----------GT1   <---------AHL20(2)     <---------YAB1------ --------YAB1<-----------GT1         <---------KAN4(2)   --------->AHL20(2)    --------->YAB1  <-----   tatgcttgtaaacttttaccatatggcttacaagttgagaattttctaatctagttaaaaaaaattgtacgaagatgtaaatgataaatgatgataaata  9113700           --------->KAN4(2)               --------->GLK1(1)         ------->TEIL                      <---------GLK1(1) <----------DOF2                     <---------ARR14(2) ------>ARR11(3)               --------->ANAC58              <-----------GT1                     ---- -------ARR11(3)               --------->ANAC46           <---------AHL20(2)                  <------ -----AHL20(2)                 --------->ANAC58        <---------AHL20(2)            --------->DAG2 --->AHL20(2)         --------->REM1(1) <---------YAB1 --------->AHL20(2)           ---------->DOF2 ----AHL20(2) <---------MYB46(3)    <---------GLK1(1) --------->ICU4           <-----------------AGL1   aatcttttatgtatattcgttgctacaacttacaaggcatttctgatttctcagtaattttttattccatttttgctaattttccaaaaaggaattaaga  9113800                 --------->AHL20(1)                 --------->AHL20(2)                 <---------AHL20(2)                <---------AHL20(2)  <---------ANAC46             <---------ICU4 --------->bZIP60(1)            --------->AHL20(2)     --------->At4g35610                                              -            <---------ATHB51<---------bZIP60(1)                                           <---------ANAC58            <---------AHL20(2)  <-------GAMYB                                             <---------ANAC46        <---------YAB1      <---------O2                                            <----------DOF2 <      --------->AHL20(2) --------->ANAC46                   <---------YAB1         <---------ICU4   -      --------->YAB1 --------->AHL20(2)            <---------ARR11(3)------>ZmHOX2a(1) *TSS ---------     --------->ICU4  <---------AHL20(2)     --------->ZAT18<-----------GT1 <---------ZAT18<---------ANAC58 ----->GLK1(2)  --------->AHL20(2) <---------At4g35610     <---------ARR11(3)<---------At4g35610----- ---TOE2(3) --------->ICU4  --------->O2    <---------ZAT18--------->ARR11(3)--------->At4g35610<----   atatgaaattataaataattaaattaaacgacgtcgttgctgagagggctctagctcttattatctttctcctctagtctgctcatcttttcgcgtggtc  9113900     --------->TOE2(3)     --------->TOE1(3)<----------ID1                                              <---------ALFIN1  ------>MYB46(1)     ----------->GT1                                           <---------RAP2.6(3)  ------>MYB83 <---------------AGL15                                            ------>NtERF2 -------->AtMYB61  --------->DAG2                                   --------->At4g35610 ---------MYB59--------------->AGL15                                <---------At4g35610 -------->MYB46(3)---------->DOF2                                 --------->HSFB2a(2) >ALFIN1---------->DOF2                              --------->ANAC58          <---------ETT(1) ---->ETT(2)  ----------------->AGL2        <----------DOF2       <---------HSFB2a(2)    ---------->DOF2 -----ETT(2)  --------->LBD16  ---------->DOF2       --------->ANAC58     --------->At4g35610 <------   gaccaaacctaaaacccccaaaaagagaaaaatcaaagaccattcgctatttcgctcgctactcagtttcagaagaagatgccgacactcacaaagcttt  9114000                           --------->ANAC46                           --------->ANAC58                           --------->ANAC58                  <---------MYB52(2)                 --------->At4g35610                 <---------At4g35610               <---------ALFIN1              --------->LBD16                            <------NtERF2             --------->ANAC58                  <-----------HVH21             --------->ANAC46          <---------ZAT2   ------>NtERF2             --------->ANAC58          ----------->RAV1(2)            <----------DOF2             --------->RAP2.6(2)       --------->ZAT2  --------->ANAC46             --------->RAP2.3(2)       <---------At4g35610    <---------ARR11(3)   --------->AtLEC2------->GAMYB       <---------ZAT14--------->RAP2.6(3)  <-----------GT1 ----DOF2   --------->RAP2.3(1)        --------->At4g35610    --------->ARR11(3)         <-----------GT1   attccatggaagaagccgcaactcacaacaagcaagatgactgctgggtcgtcatcgacggcaaggtctactctttttctcaatcttctaatttcaatcc  9114100                                                              <---------ANAC58                                                              <---------ANAC46                                                       <---------ANAC46                                                       <---------ANAC58                                               <---------ARR11(1)                                               <---------ARR14(2)                                               <---------ARR11(3)                 --------->ARR11(3)                       --------->HSFC1(2)      --------->ARR14(2)     --------->GLK1(2)    <---------WOX13(1)                       <---------HSFC1(2)     <---------CCA1(2)      <---------GLK1(2)  <---------YAB1                   ------>ZmHOX2a(1) --------->HSFB2a(2)      <---------ANAC58    --------->GLK1(2)               <---------ARR14(2)    <---------HSFB2a(2) <-----------RAV1(1)     <---------GLK1(2)               --------->ARR14(2) <----------DOF2      <---------ANAC58     <---------ATHB12   ttgttcatgtgtttgtgaatcctgaagtttccttcgctttcagaaaccatatctgtgtcttgttgcctatagaatctaatgaagaatcttgtaattgctg  9114200                            --------->HSFC1(2)                            <---------HSFB2a(1)                            --------->HSFB2a(1)                            <---------HSFC1(2)                           --------->ARR14(2)                           <---------ARR14(2)                           <-----------ARR10                           <---------ARR11(3)                            --------->YAB1            --                           --------->GLK1(2)                           --------->GLK1(2)          <--                          <---------GLK1(2)                       <---------ZAT14   --------->ANAC58-                       --------->YAB1  <----------DOF2       --------->WRKY38(1)    --------->ANAC58<                 <---------At4g35610 ------>ZmHOX2a(1)    --------->ALFIN1    --------->PCF5 --------   tttatatgtagttagattgagctaatcagaatcttcttcctctttttttttgttgataatgtgttgacttcacaatcttggtccccaagaaaatgatatg  9114300                                                                                         <---------HSFC1(2)                                                                                         --------->HSFC1(2)                                                                                         <---------At4g35610                                                                                      <--------P                                                                                    --------->ANAC58    <---------ANAC58                                                                --------->ANAC58    <---------ANAC58                                                               <---------TOE1(2) --------->HVH21                                          <------ZmHOX2a(1)        <---------TOE2(2) -------ANAC46                   ------>ZmHOX2a(1)   ------>ZmHOX2a(1)            <-----------RAV1(2) -------->At4g35610          <---------ARR14(2)     <---------LBD16           <-----------HVH21<<<<<< ---------At4g35610          --------->ARR14(2)    ----------->RAV1(2)       <-----------RAV1(1)XXXXX ->CCA1(2) <----------DOF2   ------->TEIL        <---------ARR14(2)          =================RAV <<<   gctgatgcgttctctttacaggtctatgatgtatcctcttatatggatgagcatcctggaggagatgatgtgcttcttgctgtcgcaggtaagcttcttc  9114400  Previous    Next  AGI:  At1g26330.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41839.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943) Range:  from: 9107506    to: 9113711    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g26340.1    Description:  B5 #6 (cytochrome b5 family protein #6); heme binding / transition metal ion binding. similar to ATB5-A (Cytochrome b5 A) [Arabidopsis thaliana] (TAIR:AT5G53560.1); similar to cytochrome b5 isoform Cb5-D [Vernicia fordii] (GB:AAT84461.1); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) Range:  from: 9113887    to: 9114964    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version