Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->AHL20(2)             --------->YAB1--------->ARR11(3)                                  --------->ANAC58       --------->ANAC46   <---------ICU4                                  <---------------AtSPL3       --------->ANAC58   --------->ATHB12                    --------->ALFIN1 --------->ANAC58       --------->ANAC58  --------->ICU4                     <---------ANAC46   --------->ANAC55(2)     <---------ALFIN1    <---------YAB1            <---------YAB1         --------->DAG2     --------->AtMYB61 --------->YAB1            <---------ICU4           <---------------AtSPL8<----    --------->ANAC46   <---------ICU4            --------->YAB1         ---------->DOF2   --------->ARR14(2)  --------->ANAC46    --------->ICU4          --------->YAB1<---------ANAC58   <---------ANAC55(2)  --------->REM1(1) --------->YAB1      <----------DOF2     <---------ANAC58  <-------TEIL<---------ARR14(2)   atctacaccacacaataaaaactgataatgattttggtatttctttaagcatcatcacagaagcgtgtcgcaataaaaggtacgtaagtgagaaacctct  9074900                                                                                     --------->ANAC58                                                                                 <-----------HVH21                                                                                 <-----------TGA1                                                                                --------->bZIP60(1)                                                                                --------->TGA1a                            <---------HSFB2a(2)                                 --------->ANAC58                            ------>ZmHOX2a(1)                                   --------->ANAC46                           --------->TOE1(2)                                    <---------O2                           --------->TOE2(2)                                    --------->O2                         <<<<<<<<<ARR2                                        ------>MYB83                         <<<<<<<<<ARR1                           ---------->ID1 <---------TGA1a                         <<<<<<<<<ARR2                         <---------ANAC58 --------->ANAC58                    --------->YAB1                             <---------ANAC58 <---------bZIP60(1)                  <---------WOX13(1)                       ------->MYC3       --------->MYB52(1)                --------->ATHB12                        <---------ALFIN1      ------>MYB46(1)               <---------MYB52(1)                    <---------ALFIN1        --------->MYB55(1)              <-----------TGA1                     ----------->RAV1(1)      <---------MYB46(2)              <-----------HVH21     --------------->AtSPL3 <-------MYC3     <---------MYB52(2)             --------->DEAR3(1)     --------------->AtSPL8--------->O2      <---------MYB111(1)             --------->ANAC46     --------->ATERF1(1)--------->REM1(1)      <---------MYB59          <-----------GT1<<<<<<<<<ARR1          <---------HSFB2a(2)  <----------DOF2 --------->ANAC58 ------DOF2<---------At5g28300 <------ZmHOX2a(1)--------->HSFB2a(2)  =====================bZIP_DOF  -   ttaagaacagtttcaccgtcattgacaatcctaggaggcccgtacttgttctgcaacaccacgtttcgtccctttggacctaacgtcacgcctaatagtt  9075000                 ------>MYB46(1)                 ------>MYB83               <---------MYB111(1)               ------->PIF5              <---------At4g35610              --------->At4g35610              --------->ZAT2              ========================RAV              ----------->RAV1(2)             ------->TEIL            <---------ALFIN1       <---------ARR11(1)       --------->ARR14(2)       <-----------ARR10                                            --------->ANAC58       <---------ARR14(2)                                           --------->ANAC46       <---------ARR11(3)             --------->YAB1                --------->ANAC58      <---------CCA1(2)   ----------->RAV1(1)               ---------->DOF2    --------->AtMYB61    <---------ALFIN1                  --------->YAB1                    --------  ------>NtERF2<-------PIF5        --------->WOX13(1)--------->GLK1(2)---------->DOF2        <------- --------->RAP2.6(2)    --------->MYB46(3)      --------->ANAC58 --------->ZAT18        --------->TOE1(3) -------->MYB46(3)    --------->REM1(1)         --------->ANAC58 <---------ZAT18       ----------->RAV1(2)   tagccaccatatctgcacctgccttcaccaccattatccatcataagaaaacgaaattctataaaagtgcccgaaagaagaacgagaaaacctgaagctt  9075100                          --------->ZAT14                          <---------ZAT18                          --------->ZAT18                          <---------ZAT14                      --------->DAG2       <---------At4g35610                                      <                  --------->At5g28300      --------->At4g35610          --------->ICU4        <------                  <-------GAMYB         <---------ZAT2             <---------ANAC46           <------  ----------->HVH21  ---------->DOF2    --------->At4g35610     --------->GLK1(2)            <------- ->HSFC1(2)  ----------->HVH21          <---------At4g35610--------->ANAC58        >>>>>>>>>TBF1   <- --HSFC1(2) <-----------HVH21    <----------DOF2           --------->ANAC58     >>>>>>>>>TBF1<-------   cttggtgacagagccatcacggttaaagtgaacttcttttgcagcagctcttactctcagaacgaaattcggtgaagatgaagaagaagaagatggcttt  9075200     --------->HSFC1(2)     <---------HSFB2a(1)     --------->HSFB2a(1)     <---------HSFC1(2)                           --------->ANAC58   ---------->DOF2                                --------->ANAC58                                --- --------->LBD16                        <---------ANAC58                              --------->AHL20(2) ---------ANAC46                        <---------ANAC58          *TSS   --------->ANAC58       <---- ---DAG2                               --------->ZAT2        <---------MYB52(1)       --------->AHL20(1) ----DOF2              <---------WRKY38(1)      ---------->DOF2  ---------->DOF2      <---------AHL20(2) --ANAC58    --------->YAB1------->GAMYB<---------ANAC46    <-------GAMYB--------->ANAC58      <----- --------LBD16  ---------->DOF2        <---------ZAT2       <---------RAP2.6(3)      --------->AHL20(2) --ANAC58   <------ZmHOX2a(2)       <---------At4g35610    ----------->GT1 <------ZmHOX2a(1)   ------   ttgcggaaagttcgatcagaaagaggcaacgcagagagagcagcttgtgagaaagccattgccgttaaaaagagcaaggactacaaaaaaaattatcagc  9075300                                ----------->GT1                               --------->ALFIN1                            --------->DAG2      --------->ARR11(3)                            <---------TOE2(3)   <---------ARR11(3)                         <---------AHL20(2)    <---------CCA1(2)                        --------->YAB1     =====================HOX2a_HOX2a                       <---------AHL20(2)  ------>ZmHOX2a(2)                                        <                       <---------YAB1     <------ZmHOX2a(2)                                         -                    <---------AHL20(2)    ======================HOX2a_HOX2a                         <    <------------CBF--------->AHL20(2)   --------->ARR11(3)           --------->ALFIN1              < ------>At4g35610   <---------AHL20(1)   <---------AGP1             <-----------RAV1(1) --------->ANAC58 -----GLK1(2)       --------->AHL20(1)   <---------ARR11(3)      <---------AtMYB61      --------->ANAC58 ----At4g35610     --------->AHL20(2)   --------->RVE1(1)     <----------DOF2       --------->YAB1  < --->At4g35610   <---------ARR11(3)  ---------->DOF2     ------>ZmHOX2a(1)   <------NtERF2      <----   ttctgagattgagtagcaagattatattataaggtgggaaaaagatctcatatctcttcctatacttttggtgttgggccgagttatagtaagcaatttt  9075400           --------->MYB52(1)           ----------->RAV1(1)       --------->PCF2    <---------ANAC58    <---------ANAC58 ------MYB83  ------->GAMYB -------->MYB55(2)                            <---------PCF2 ---------DEAR3(2)                   --------->ANAC46 ------MYB46(1)                      --------->ANAC58                                ---------->DOF2 ---------MYB46(3)                   --------->ANAC58                            --------->ANAC58  -- -------RAV1(1)    ---------->DOF2 --------->ZAT6   <---------ATHB12             --------->ANAC58 ---   gttggttcgggcccaacagaagaaagaaacccattcaacactcaagagggtccaatagttaacatgtagtctcgattaatctctcgcaaaagttttcaaa  9075500            <---------YAB1          --------->WOX13(1)         --------->AHL20(2)         <---------AHL20(2)        --------->AHL20(2)     <---------AHL20(2)     --------->AHL20(2)  --------->YAB1 ----------->GT1                <-----------------AGL3       <---------------AtSPL8 <---------YAB1           ---------->DOF2                    --------------->AtSPL8 ------->YAB1--------->YAB1   --------->ARR14(2)    <---------KAN4(1)                       --------- ------>ICU4<---------ATHB12  <---------ARR14(2)   ------->TEIL                 --------->GLK1(2)   atgatgataaattaatcatagaaattgtcaaagaaccgcatttggctcgaatgaatgttctatatagtacccatttcatgagaaactgaagatgaaaagg  9075600                                                          --------->ANAC46                                                          --------->ANAC58                                                          --------->ANAC58       --------->ICU4                             <---------TOE2(3)        --------->CCA1(2)          --------->AHL20(2)    ----------->GT1     --------->ATHB12           --------->ANAC58       <---------LBD16     <------ ->DOF2<---------AHL20(2)   --------->YAB1         --------->ANAC58  --------->ATHB12<---------ICU4   aagagtgagttaatttagtcacagactcattgagaatgcatagtctcaattgcaaggtataagcaaattgatcatttgtggaaatatttatggctaatca  9075700                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                           <---------ANAC46                <---------ARR11(3)                           <---------ANAC58                --------->ARR11(3)                    <------MYB46(1)                <---------AGP1                    <---------YAB1   ----------->HVH21                              <-----------RAV1(1)                           <---- --------->At4g35610                     --------->ICU4      <---------ANAC58                   ----- <---------At4g35610     --------->AHL20(2) <---------YAB1 <---------YAB1                      >>>>>> ---ATHB12 --------->AHL20(2)       ----------->GT1   <------MYB83<---------ZAT18            <-------   atgtgctgacaaatttaagatctcatataaaataagtcttgtaattttgattatgttggtgatgcttgtgcaatttgaacatcccaagagtgtatttgat  9075800  Previous    Next  AGI:  At1g26230.1    Description:  chaperonin, putative. similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.1); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G13470.1); similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15358.1); similar to unknown [Picea sitchensis] (GB:ABK24483.1); similar to hypothetical protein OsI_034280 [Oryza sativa (indica cultivar-group)] (GB:EAY80321.1); contains InterPro domain Chaperonin Cpn60; (InterP Range:  from: 9072375    to: 9075266    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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