Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                   --                  <----------DOF2                                           --------->ANAC58       <-               <---------ARR11(3)                                           --------->ANAC58      ---          <---------MYB52(2) <---------ARR11(3)                           ---------->DOF2        ----     --------->ANAC58        <-----------ARR10               --------->ANAC58                 -------     --------->ANAC46        --------->ARR11(3)--------->GLK1(2)     --------->STY1(2)        -------     --------->ANAC58  ----------->GT1        <---------GLK1(2)      <---------STY1(2)        ------- -----ALFIN1   --------->ARR11(3)         ---------->DOF2    --------->ANAC58        --------->MYB52(1)   accctacaagaaacaaacatcttttgggtaaaatctaactacaaaaaagaatctatagaagagaagcaactagctcgaaagtaacccaaacgatttaagc  9054300                                                        <-----------------AGL1                                                        <-----------------AGL2   <---------ZAT2                                   --------->HSFC1(2)  ------->TEIL                                      --------->HSFB2a(1)                    --------->At4g35610  --------->ARR14(2)                                <---------HSFC1(2)                     --------->ZAT2  <---------ARR14(2)                                <---------HSFB2a(1)                    <---------At4g35610 ------>GAMYB                                       <---------KAN4(1)                      <---------ZAT2 ---------->HVH21                                  ------->TEIL                         ------->GAMYB ------->MYB46(3)                                 --------->MYB52(1)                   --------->MYB46(3) --------MYB52(2)                               --------->MYB46(3)                    -------->P ------>At4g35610                               <---------MYB52(2)                --------->ANAC58 ----->MYB52(1)                               --------->MYB52(1)                  --------->ANAC46 -->ANAC46              <---------WOX13(1)---------->DOF2                         --------->ANAC58 -->ANAC58            --------->ATHB12 <---------At4g35610        --------->WRKY18(1)--------->MYB52(1) -->ANAC58           <---------YAB1    --------->At4g35610  <--------P      <---------ANAC46 --------   aacggacctggttgaagagaagcctgattgagagaggtctcagcgaaagaacgaacgttctggttagggtcaagacttgctgataagcaaccgagcagcc  9054400                <---------ALFIN1                              --------->ANAC58                --------->AtMYB61                             --------->ANAC58      ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)               <---------ANAC58    <---------ARR11(3)                            --------->HSFB2a(2) <---------ANAC58     <---------ANAC58    --------->ARR11(3)                            <-----------RAV1(2) <---------ANAC46    <---------At4g35610    <---------ARR14(2)                            <---------HSFB2a(2) <---------ANAC58    --------->At4g35610 ->RAP2.3(3)   --------->MYB46(3)                ----------------->AGL1                 <-----------GT1   attgctgatcttggtccaccaccattgagagattaatcgatggaatccaattccagatgggatcaagaaattgagtgtttgaaaattgttttagcttccc  9054500                                                                                           <---------GLK1(2)                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(3)                                           <------NtERF2                                 <---------TOE2(2)                                         <---------ANAC46           ----------------------->TaNAC69(2)                       <----------DOF2 <-----------HVH21     ------>MYB83     <---------ZAT18                       <---------MYB52(1)--------->ETT(1)    --------->MYB52(1)<-----------GT1 <-----                   ---------->ID1   <------ZmHOX2a(1)        ------>MYB46(1)*TSS         <---------TOE1(2)            <---------LBD16      <------ZmHOX2a(1)----------->GT1 <---------ANAC46      ------>ZmHOX2a(1)   tcaattttcaaattcccgcttgtccctttggtataggaggatgtcggagagacagtagaaaccaaatggagtttaagtagttcacctctcctagattttg  9054600                                                                                      ------->GAMYB                                                                                   <-----------GT1                                              --------->AHL20(2)            --------->LBD16                                             <---------ATHB12             <---------LBD16                                         ------------>CBF               ------>MYB46(1)        <-----            <----------DOF2             --------->ANAC58                ------>MYB83<---------At5g28300          --------------->AGL15         --------->ANAC58              <---------MYB46(2)      <------         ----------------->AGL2    ---------->DOF2                    <---------MYB59 --------->TOE2(3)  <---------HSFB2a(2)        <---------HSFB2a(2)           --------->AHL20(2) <---------ARR14(2)    -  --------->HSFB2a(2)        --------->HSFB2a(2)      --------->TOE2(3) --------->MYB52(1)    ------- ------RAV1(1)          <---------MYB46(3) --------->WOX13(1) ------------>CBF--------->ARR14(2) <---   ttgtcgagaaaaccctttatagacagaggttgcagaagaaagaagcaatcaaataaccaaaataaacaattaccaaaccggattttaaccgtagatttaa  9054700           --------->LBD16          <---------RAP2.6(2)         <---------LBD16       <---------ARR14(2)       --------->ARR14(2)                                   --------->CCA1(2)    ----------->TBP                                       --------->YAB1 ----AHL20(2)                                    --------->LBD16                    ---------->ID1 ---AHL20(2)                   *TSS             <---------HSFB2a(2)          <---------ARR11(3) ---------->GT1               --------->WOX13(1)--------->HSFB2a(2)  <------ZmHOX2a(1) -->AHL20(2)                ------------>CBF   <---------LBD16--------->MYB52(1) <-------TEIL<<<<<<<< ---------CBF     <---------ZAT6      ----------->GT1  ---------->DOF2       --------->ARR11(3) <<<<<   attggtataaatccggcttagtgtaatttcatcaatcgaacagtttatctccagaatcaaagataaacggaggagaagagagcttcgtcgtcttcttctt  9054800                                                                                   <---------ANAC58                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                       <---------ALFIN1                                                                      <---------REM1(2)                                                                     <---------ALFIN1                               <-----------GT1              <---------MYB52(1)     <---------ANAC58    ------>NtERF2           <---------ICU4                  ----------------------->TaNAC69(2) <TBF1           ------>ZmHOX2a(1)                      <---------At5g28300    <----------DOF2 <<<<TBF1  ------->TEIL    <-------TEIL                <-----------GT1--------->ZAT14        <-------   cttcgcctccatgaatctcctcaagacgattcattaccagtctaccattactcgattttaccgttttgcccctacacgctcctttgcttcttctgtgtca  9054900                                                     <---------ANAC58                                                     <---------ANAC58                        --------                                                    <-------TEIL                            ---------                                                   --------->ALFIN1                       --------->YAB1                                                 <------MYB83  --------->HSFB2a(2)   <----------DOF2                                                 --------->HSFB2a(1)           <---------ANAC58                 <---------GLK1(2)               <---------HSFB2a(1)           <---------ANAC58 -----              <---------ANAC55(2)                <------MYB46(1)          <-----------RAV1(1)<-------   <---------REM1(2)                       <---------LBD16     <---------HSFB2a(2)   <---------DAG2 ----HVH21    --------->ANAC55(2)  --------->ZAT6<---------HSFC1(2)    <---------ARR14(2)<---------YAB1   ctctctccacagagacacataatctctctcgtttctatctctaatcgtggaaggtgcttcgcattctcgagcgtctctggtgcttcgctttataataatc  9055000  <------ZmHOX2a(1)    --------->LBD16                                 ---------->DOF2 ->YAB1            --------->ARR14(2)                               <---------HSFB2a(2) >ICU4             <---------ARR14(2)                     <---------bZIP60(2) ---->YAB1         --------->GLK1(2)                 --------->At4g35610xxxxxxxxxxxxxxx>smallRNA(le3) --ICU4    ---------->DOF2      <-----------GT1    <------ZmHOX2a(1)--------->HSFB2a(2)   aagaggatgggaagaaagaagaatccgagagaaattacgcttcgacgaaggaaggagatgaagtggtttaccagaaaacgctgagattagtagaatgtgc  9055100                --------->ANAC58                --------->ANAC58           ----------->HVH21          <-----------HVH21       --------->At4g35610       <---------At4g35610       --------->ZAT2       --------->ZAT14       <---------ZAT2                                 ----------->GT1                  <<<<<<<<<<<<<<       <---------ZAT14                               <---------TOE1(3)     <---------ICU4    --------->At4g35610                      --------->ANAC46    <---------ANAC58      ==============    <---------At4g35610                      --------->ANAC58    <---------ANAC58      <------ZmHOX2a(1)   --------->MYB52(2)       <----------DOF2  --------->ANAC58  <-----------GT1      <---------ICU4  --------->ZAT18   <------NtERF2 --------->ANAC46   <---------TOE2(3)    <---------YAB1   catgttcgctgctgtgacaggcctcgtttactttctcagcaattctctcgccattgaggttaatttttcttgccttataattcccataaggacattggag  9055200  Previous    Next  AGI:  At1g26170.1    Description:  protein transporter. similar to protein transporter [Arabidopsis thaliana] (TAIR:AT3G59020.2); similar to protein transporter [Arabidopsis thaliana] (TAIR:AT3G59020.1); similar to putative Importin 9 [Oryza sativa (japonica cultivar-group)] (GB:BAD68021.1); similar to hypothetical protein OsI_021715 [Oryza sativa (indica cultivar-group)] (GB:EAZ00483.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42041.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) Range:  from: 9047420    to: 9054576    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g26180.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO42035.1) Range:  from: 9054731    to: 9056839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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