Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------->GAMYB                                              --------->MYB46(3)                                             --------->ANAC58                                             --------->ANAC58          --------->At4g35610                                         --------->ANAC58              <---------At4g35610       <---                                         --------->ANAC58           <---------At4g35610          <---                                <---------ANAC58              --------->GLK1(2)                  ---- -------->REM1(2)               <---------ANAC58             <---------ARR14(2)                  ---- ------ANAC58          <----------DOF2   --------->AtLEC2    <---------GLK1(2)        <---------ARR11(3) ------ANAC58      <----------DOF2       --------->ANAC46    --------->ARR14(2)       --------->ARR11(3) ------ANAC46    --------->At4g35610   <-----------RAV1(2)--------->YAB1 <------ZmHOX2a(2)    -------   cttgtagccataaatgaacagctttctttgttttccttgaaccaggcaaccatctgtgtatcagaatcgctgcagatcaaaaccccaagttcttgataaa  9023700                                                                      --------->DAG2                                                                    ---------->DOF2      ---------->DOF2                                        --------->ARR11(3)            <---------ICU4    --------->ANAC58                                         <---------ARR11(3)            --------->ZAT6    --------->ANAC58                                         --------->ARR14(2)           <---------YAB1 ------ARR11(3)                                              <---------ARR14(2)         --------->YAB1 ------AHL20(1)                                             --------->GLK1(1)          <------ZmHOX2a(2) ----->ARR11(3)                                             <---------GLK1(1)    <------ZmHOX2a(1) ----->AHL20(1)                                           ====================================HOX2a_HOX2a -->AHL20(2)                                              <------ZmHOX2a(1)      =============HOX2a_HOX2a   atattcaagaaagagagagagagagagagagagagagagagagagagagagagagagagaggaaatcttcaaaaggggcatgaggagggatcatcactac  9023800                                 <---------At4g35610                                 --------->ZAT2                         --------->YAB1<------ZmHOX2a(1)                        --------->MYB46(3)                        <---------ATHB12                           <----------DOF2             --------->YAB1      --------->At4g35610    ----------->GT1          ---------->DOF2    <   <---------ALFIN1   --------->WOX13(1)           <---------REM1(2)   <---------YAB1               -   cttctccacttacaagaatgaagccaatcaccatcagcagaggatgaagagtctacaagggtataaaaactttattagagagagaaagagagagagagag  9023900  ===========================HOX2a_HOX2a                  <---------TOE2(2)  --------->CCA1(2)                                       <---------TOE1(2)                    ------  <------ZmHOX2a(2)                                      ------>ZmHOX2a(1)             --------->ARR14(2) --------->AGP1                                          <---------------AGL15     --------->ZAT14 <---------ARR11(3)             <---------YAB1  --------->At4g35610         --------->ZAT18  <------- --------->ARR11(3)            <---------------------WRI1--------------->AGL15     <---------ZAT14 ---------GLK1(1)             --------->ALFIN1  --------->ZAT2 --------->MYB59--------->ZAT18-------- -------->GLK1(1)     <------ZmHOX2a(1)         <---------At4g35610  <------ZmHOX2a(1) <---------ARR14(2)   agagatccaatttgatatcaacgaggaagggagtgtgatagttacagagtagctgagtcctagattaggcaggaagagagcccagtacagaaccgaaact  9024000                                                       <---------ALFIN1                                                    ------>ZmHOX2a(2)                                                  --------->ARR11(3)                        --------->ANAC58          <---------ARR11(3)                        --------->ANAC58          <---------ARR14(2)                    --------->ANAC58<--------ATHB1<-----------ARR10 --->TOE1(2)        --------->ANAC58--------->YAB1--------->ARR14(2) --ARR14(2)  --------->SPL7        <---------YAB1<------ZmHOX2a(1)                 ---------->DOF2 ->ARR14(2)--------->LBD16         <---------ATHB12<------ZmHOX2a(2)      <-----------GT1          <-   gcgactactaaaccggacagtctcgcaaacaagaccaatgatagtcttgaaggatctacacttcccatttctgttttctctcttcaaaagttgagtaagt  9024100                                                                                             --------                                                                                           ------>ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)               ----------->GT1                            <---------YAB1                 <---------ARR11(3)             <---------ZAT14                            --------->YAB1                   ------->TEIL             --------->ZAT18                           ----------->GT1                   <---------AGP1         <---------------AtSPL8                 <---------RAP2.6(3)                      --------->ARR11(3)      --------->ZAT14 --------->ZAT14           ------>NtERF2                      <---------AHL20(2)      <---------ZAT14 <---------ZAT14          <---------ETT(1)              <------ZmHOX2a(1)    --- --------ZAT6--------->ZAT14             <---------ZAT6<---------YAB1        =====================HOX2a_HOX2a   agtgctactgtagagtacagtgactacagtctctcagacactagagttgccgacaaaatgataatttgagaaatagagaggacattttatggatcttgta  9024200                                                        <------------CBF                                              <---------ANAC46     <---------ARR11(3)                      --------->ZAT2     --------->ARR11(3)                      --------->At4g35610                                  --- --->GT1                                     <---------ZAT2 ---------->DOF2                       --- ------->DOF2          <---------ICU4        <---------At4g35610              <----------DOF2     <--   taaagaagacctctctatctcttaataaggcccatttgattcaaggctgctggtactgtattgaaagtcaaaatgtttgacttttgaaatttagacaaga  9024300          <---------ZAT14          --------->ZAT14      --------->ZAT6     ------>MYB46(1)                                                <---------ZAT14     ------>MYB83                                                <---------ANAC46    ----------->RAV1(1)                                   ------>MYB83   --------->AtMYB61           ----------->GT1         --------->ANAC58  --------->MYB46(3)     <------------CBF              --------->ANAC58 -------->P          --------->ANAC58                  --------->ANAC46 ------>At4g35610    --------->ANAC58                --------->ANAC46 ------>HSFC1(2)     --------->ANAC46          ------->TEIL    <---------ANAC46      <<<<<<<<<<<<<<<< -------HSFC1(2) ----------->RAV1(1)         <-------TEIL ------>MYB46(1)---------->DOF2      -------   agctaccaacagtaaacagcaacaagctattgagagtaaatagaaaatgcatttcacaccaaatgtcgagtatacaaaagttcaaaataacattggatat  9024400                                                                       <---------TGA1a                                                                       --------->TGA1a                                                                       --------->O2                                                                 ----------->RAV1(1)                                                    <-----------GT1    <---------O2                                                 <---------AHL20(2)--------->ANAC58                                                 --------->AHL20(2)--------->ANAC46                 -                                         --------->GLK1(1)       --------->AtMYB61                  -                                    <------ZmHOX2a(2)   --------->ANAC46    ----------->GT1         -                                   --------->ARR11(3)   --------->ANAC58    <---------ANAC46        -        --------->ANAC58           <---------ARR11(3)   --------->ANAC58 --------->ALFIN1          <- <LFY   --------->ANAC58       ---------->DOF2  --------->AHL20(2) --------->ANAC58              <--- -->CCA1(2)                    ==================================================bZIP_DOF    <-------   aagaagaacgacgctattaccaagtcttaaaaacaaagatcagaaatcaaattaatacactccaaaaccacacaagtggggttttataacagaaaacatt  9024500                                                       <<<<<<<<<<<<<<<<<LFY                                                       >>>>>>>>>>>>>>>>>LFY                                                    <---------At4g35610                                                    --------->ZAT2  ----------->HVH21                            --------->At4g35610 -------->ANAC58                        --------->ANAC58 -------->ANAC46                        --------->ANAC58                               <---------HSFB2a(2) -------->ANAC58                    --------->ANAC58<---------ZAT2                     --------->HSFB2a(2) -------->ANAC55(2)               ---------->DOF2   --------->GLK1(1)              <----------DOF2 --------LBD16             <---------ALFIN1    --------->ZAT2                  <---------ZAT18 ------REM1(2)           ----------->RAV1(1)   <---------At4g35610          ---------->DOF2 --ICU4           <---------AHL20(2)--------->ANAC58--------->At4g35610  <----------DOF2   acacgggactcggtttttgttttattgccacataccaaaagcactcaagagctgagctcccattggattttgagtctttagagccctttctagcagaaca  9024600  Previous    Next  AGI:  At1g26100.1    Description:  cytochrome B561 family protein. similar to ACYB-1 (Arabidopsis cytochrome b561 -1), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT5G38630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42076.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Cytochrome b561; (InterPro:IPR004877) Range:  from: 9022529    to: 9024068    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g26110.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45330.1); similar to hypothetical protein [Glycine max] (GB:BAB41197.1); contains domain PTHR13586 (PTHR13586) Range:  from: 9024332    to: 9027773    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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