Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->At5g28300                     --------->MYB52(1)                <---------YAB1                       <------ZmHOX2a(1)                      ---------             --------->ICU4                       <-----------RAV1(2)                <---------HSFB2a(2)           <---------TOE1(2)---------->DOF2    ------->GAMYB                         --------->HSFB2a(2)   <---------At5g28300  ----------->GT1       --------->MYB46(3)    <---------bZIP60(2)--------->LBD16  <-----------GT1--------->YAB1             --------->MYB52(1)<------ZmHOX2a(1)   <----------DOF2   agatttaccgtcgtagttatcataaacggtgaaagttctgagatagtaacgaccaggagggagaggaacgacgtagcaattcttctttccgaaggaaaga  8995100                                                                        <------NtERF2                                                                      --------->DEAR3(1)                                                                    --------->LBD16                                                                    ------>NtERF2                                                               <---------ANAC58                                                               <---------ANAC58                                                              --------->ABI4(2)                                                              <---------MYB46(3)                                                              --------->HSFC1(2)                                                             --------->ALFIN1                                                            <------NtERF2                                                           <---------MYB46(3)                                                           <---------DEAR3(2)                                                           <---------DEAR4(2)                                                           <---------ORA47(2)                                                          <---------DEAR3(1)                     <------NtERF2                        <---------DREB2C(2)                       -                   <---------DEAR3(1)                     --------->ALFIN1                        ---     ----------->RAV1(2)                                 <---------ABI4(1)                    <------    --------->MYB52(1) <---------MYB46(3)                <---------------------WRI1       --------->ANAC58    ------->TEIL  <---------LBD16                       ------->GAMYB<---------LBD16      --------->ANAC58 ->DOF2----------->HVH21                             --------->MYB52(1)--------->LBD16  <------ZmHOX2a(1)   gggaagtacctgatggttttctcggcgattagatggaatcgaagaggctcggagacaacggcggtgcttccgccggagtagaattgatcaggaagccatg  8995200                                                                                                    =                                                                                                    =                                                                                                    -                                                                                                   <-                                                                                                   ==                                                                                                   ==                                                                                                  <--                         --------->HSFB2a(2)                                                      ---                        <---------ANAC58                                                          <--                        <---------ANAC46                                                          ---                        <---------ANAC58                                                          ---                        <---------LBD16                <---------ARR14(2)                         <--                       <---------LBD16                 --------->ARR14(2)                         <--                     <---------ARR14(2)        ---------->DOF2                                   <---         <---------ANAC55(2)              <---------ATHB12                            <---------At4g35610 <-------GAMYB      --------->HSFC1(2)  --------->WOX13(1)            <------ZmHOX2a(1)          ---- ---------->GT1     <---------HSFC1(2)--------->WRKY18(1)             =============================== ---->TEIL          --------->HSFB2a(1)<---------WRKY38(1)            =============================== ---------AtSPL3    <---------HSFB2a(1)<---------WRKY12--------->GLK1(2)   <---------GLK1(1) <-------   tacggttgaatacgtctgtagaagtttcgggacttccacagtcaatgaagaaagaagtatctgcaaaacagaggaagaattcagtttcagttcatagtca  8995300 --------->HSFB2a(2) <---------HSFB2a(2) ==================HOX2a_HOX2a ================================HOX2a_HOX2a ----->ZmHOX2a(2) -----ZmHOX2a(2) ==================HOX2a_HOX2a ================================HOX2a_HOX2a -------ARR14(2) ------>ARR11(3) ---------ARR10 ------>ARR14(2) ------>AGP1 -------AGP1<------ZmHOX2a(1)  <---------SPL7                     <------ZmHOX2a(1) -------ARR11(3)              <---------ANAC55(2)               --------->ALFIN1 ------CCA1(2) ---------->DOF2--------->ANAC55(2)         --------->ALFIN1 ----->At4g35610             <---------------AtSPL3    <---------AtMYB61       <------ZmHOX2a(1) ======HOX2a_HOX2a           --------------->AtSPL3    --------->ALFIN1     <------ZmHOX2a(1) =====HOX2a_HOX2a         <------ZmHOX2a(1)         <------ZmHOX2a(1)<------ZmHOX2a(1)    <------ZmHOX2a(1) ----HVH21------------------------>ANAC81     <------ZmHOX2a(1)<------ZmHOX2a(1)    <------ZmHOX2a(1)   gatctagacggagaggagaaagagagaaggagacgtactgaatggagaggataaggagaggtggaggaggaggaagaaggaggagaggaagaggaagaag  8995400                                                                            --------->ATHB12                                                                           <---------YAB1                                                                       <---------ZAT14                                                                       --------->ZAT14                            --------->ARR14(2)                   --------->ANAC58                            <---------ARR14(2)                --------->ZAT18            <----------DOF2<------ZmHOX2a(1)                  <---------ZAT18 <---------WOX13(1) <------ZmHOX2a(1)       <---------TOE2(3)           ------->TEIL--------->ANAC58  *TSS   gaaggagagaagggcattttgggaatttaggatttgatagagttgcagagtaatgtatgtaatgggcactcactactgtgattgaagaaggaagaaacca  8995500                                                 <------ZmHOX2a(1)                                            <---------MYB46(3)                                            --------->MYB55(2)                                           --------->ALFIN1                                       <---------ANAC58                                       <---------ANAC58                           --------->DAG2--------->ALFIN1                          --------->DAG2--------->MYB55(2)                      <---------ALFIN1                         ---------->DOF2<---------MYB46(3)                    <-----------GT1    ----                    <---------TOE2(3)  <---------ANAC46               <------ZmHOX2a(1)          <---             --------->AHL20(2)       <---------LBD16               <---------TOE2(3)         <------   aaatttgtttgtcaaaaaaatgaaggaaaaaggcgagattagcgggtgggaggactgagttgagtcatttaaggacatttacacacttctggctgacttt  8995600                                             <---------DAG2                        -------->HAHB4                                             <----------DOF2                       <---------ICU4                                          --------------->AGL15                   <---------ATHB51      <----------DOF2                  <-----------GT1                            --------->ICU4 ----->AHL20(2)                   <----------DOF2                               --------->YAB1 ------AHL20(2)                   <---------DAG2                             ------>ZmHOX2a(1) ----DOF2    <-----------GT1 <-----------HVH21        --------->GLK1(2)<---------ICU4      <---------ATHB51   taatttcgcttttattttccctatatttatgggtcacttttttactactttttgatattctgtttttgactaatttttcctgtaataatgcaaattatgc  8995700                                                                            --------->CCA1(2)                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                       --------->ANAC55(2)                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                  --------->ZAT14                                                                  <---------ZAT18                      <----------ID1                              --------->ZAT18                 ---                  ---------->DOF2                                 <-------TEIL                <------           --------->ANAC58                     --------->ATHB12  <---------ZAT14           <--------           --------->ANAC46        ----------->GT1<---------WOX13(1)<---------REM1(2)    <---------ZAT6           --------->ANAC58       <---------TOE2(3)<---------MYB46(3) <---------LBD16    ----------->GT1   aatggaattatacaagaaaaaaaagaaacaaaaatagaggtatattacattgattgttgaatgaagggtgcacacgggatacgagtagatagtgttacaa  8995800                                                                                                    -                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              >>>>>>>                                                                                              <------                                                                                              <------                                                                                              -------                                                                                            <--------                                                                              --------->AHL20(2)-----                                                                       ==============================      --------->ICU4                                ----------->GT1    ---------->DOF2     ---------- ----------->GT1                                ---------->DOF2 <-----------HVH21        <---------ANAC58 ------>YAB1                            --------->AHL20(2)     --------->ETT(2)          --------->YAB1 ---YAB1                                --------->YAB1      --------->ANAC46----------->GT1---------- ---GT1          --------->ALFIN1------------------------>ANAC81<-----------TGA1         <---------ANAC58   ttgtagtaaaaatgagagagtgtgtctcgcgagaagaggcaataaaaaaaaaaagagttactacgtcgtcagtgaaagaagtaaatagttatcgtgacgt  8995900    <---------ZAT14    --------->ZAT14   --------->AtMYB61 ------>NtERF2 -------->RAP2.6(2) ---ANAC55(2) -->TGA1a ---O2 ---ANAC55(1) -->O2 ---bZIP60(2) -->ANAC55(2) ---ANAC58 ---ANAC58 ---bZIP60(1) >>>HY5 ---ANAC46                                                                    ------->GAMYB ---TGA1a                                                                     --------->AtMYB61 -->bZIP60(1)                                                                --------->MYB46(3)    -- -TGA2(2)                                  <---------MYB59                  --------->ANAC58       -- ---->ALFIN1                               --------->TOE2(3)                ------>MYB83   <---------DAG2 ===bZIP_DOF                  --------->ZAT6                                -------->P  <-----------GT1 ->TGA1                       --------->ANAC46                              --------->ANAC58     <--- ->HVH21         <---------GLK1(2)   <-----------GT1<-----------GT1         ------>MYB46(1)<---------   ggccaccatactggacaaatattctctcattcacactagtcactacctaaatattcaccataaatctaactaaatcccaaccaaaacttttaactttatt  8996000  Previous    Next  AGI:  At1g25570.1    Description:  leucine-rich repeat protein-related. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G28340.1); similar to Os01g0140400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041980.1); similar to hypothetical protein OsJ_000302 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10477.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 8991813    to: 8995483    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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