Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------WOX13(1)         ---------->DOF2      ----------->GT1      --------->ANAC55(2)      <---------ANAC46      <---------ANAC55(2)                       <---------ANAC55(2)    <---------DOF5.7(2)                        <-------TEIL          ------->GAMYB    --------->MYB52(1)                    --------->AHL20(2)        --------->MYB46(3) ---------TOE2(3)                        <<<<<<<<<ARR2              <---------MYB52(2) -------->DAG2--------->ATHB12         --------->WOX13(1) --------->ZAT14                       <---- ---->YAB1--------->DAG2         --------->ANAC46         <---------ZAT14----------->RAV1(1)    =====   ataaggtaacgtaaagtgattgctcaatatgaaacacagaacaatcaaatacataaacacagtactaacaacgaacaacaaaacattgtggaatcagagg  8974200                              ---------->DOF2                                                  ------                  --------->MYB46(3)                        --------->TOE2(3)       --------->MYB52(1)     <---------TOE2(3)       --------->AHL20(2)      <---------At4g35610          <---------MYB52(2) --ZmHOX2a(1) ------>ZmHOX2a(2)                      --------->At4g35610 --------->YAB1   <------ZmHOX2a(1) ====================HOX2a_HOX2a            --------->SPL7  --------->TOE1(3)  --------->AHL20(2)   ataaacaaaggtttgatctaaccaattgaaattaaagcctgattcgaacggtatcagctaaaccctaactccgaatgaaaatcaaataacgaggattaaa  8974300                                                                                        --------->ABI4(2)                                                                                        ------>NtERF2                                                                                      <------NtERF2                                                                                     <---------DEAR3(2)                                                                                     <---------DEAR4(2)                                                                                     <---------RAP2.3(1)                                                                                     <---------ATERF1(1)                                                                                     --------->ABI4(2)                                                                                     <---------ORA47(2)                                                                                     <---------MYB46(3)                                                                                    --------->ALFIN1                                                                                  <---------DEAR4(2)                                                                                  <---------RAP2.3(1)                                                                        <------ZmHOX2a(1)      ------                                                                     <---------ICU4<---------ABI4(1)                                                                     --------->YAB1<------NtERF2   --                  ----------->GT1                                   <---------ATHB12<---------DEAR3(1)                  <----------ID1      <---------HSFB2a(2)   <---------ANAC58     <---------DEAR3(1)--   <-------TEIL ---------->DOF2       --------->HSFB2a(2)   <---------ANAC58     <---------RAP2.3(2)-  --------->CCA1(2)           <---------YAB1              <---------MYB46(3) ---------->DOF2   <----- ---->DOF2<-------TEIL   ----------->RAV1(2)      <------NtERF2 ----------------->AGL1--------->ATERF1(1)   agagatacaaggttcataaaaagaaaaacctgatgattttctcgagatagtcggagacgatggtttgccaataaggacccaaagcggcggtgccttcagc  8974400                         ----------->RAV1(1)                         ------>NtERF2                        <---------ETT(2)                        --------->ANAC58                    ---------->DOF2                        --------->ANAC58           <---------ANAC58        --------->At4g35610                        <---------ANAC55(1)        <---------At4g35610                        <---------ANAC46     <------ZmHOX2a(2)  --------->ANAC46           --------->ANAC55(2) --->At4g35610        ------>NtERF2                <---------O2 ------->MYB46(3)    --------->DEAR3(1)            <---------ANAC58 ------->DEAR3(1)    ----------->HVH21             <---------ANAC55(2) ------>GAMYB     --------->DEAR3(1)       <---------MYB46(3)                                <------MYB83 ----At4g35610 <-----------GT1           <-------GAMYB    --------->YAB1                     <------MYB46(1)   aacgacgatcagctgtttcacctccgacgacatagtctctgagcgttgttgttacgtgaatcaaaagaaaattcagtctctctccccttggaatttggtg  8974500                           --------->At5g28300                          ----------->GT1                        <---------------------WRI1                      ----------->HVH21                      --------->At1g77200                      --------->DEAR3(1)                     --------->DEAR3(2)                --------->ARR14(2)                <---------ARR14(2)                                                         --------->LBD16                <---------GLK1(2)             <---------YAB1                              <---------LBD16            --------->MYB52(1)     <----------DOF2            <----------DOF2             <---------HSFB2a(2)    <---------HSFB2a(2) <------NtERF2         <---------AHL20(2)              <-----------GT1     <--    --------->HSFB2a(2)------>NtERF2       --------->ICU4    --------->MYB52(2)          <---------LBD16   attcttctcgagcctaacgattcgccgacggtaatttctttggaaatttttattgaagctcgttctttgtaaattgtaagtttccttcttctccgggaga  8974600              <---------WOX13(1)                                          <---------MYB52(1)      --------->AHL20(2)                                        <------ZmHOX2a(1) <----------DOF2   ----------->GT1                 <---------HSFC1(2)       ---------->DOF2    --------->ARR11(3)  ----------->GT1         <------MYB83                 --------->CCA1(2) <-------GAMYB<---------AHL20(2) ----ZmHOX2a(1)           <------MYB46(1)      *TSS    --------->GLK1(1)<---------MYB46(3)       <---   ggagaagataaattagattgacaaaatttggtttggatgctccgaatagaaaatgggatatacaaaggacttggtcgttactatctttttatttgtgtaa  8974700                 <---------AHL20(1)                 --------->AHL20(1)                 <---------AHL20(2)                 --------->AHL20(2)                <---------AHL20(2)            <---------AHL20(2)            --------->AHL20(2)                    --------->ATHB12                      --------->GLK1(2)           --------->AHL20(2)                    <---------YAB1                         <-----------ARR10           <---------AHL20(2)               --------->AHL20(2)                          --------->ARR11(3)         ------->TEIL                       <---------AHL20(2)       <-----------RAV1(1)--------->ARR14(2)      <---------ATHB12                     --------->AHL20(2)      ----------->RAV1(2)  <---------ARR14(2)  ------------>CBF    <---------AHL20(2)   <---------AHL20(2)    --------------->AGL15 <---------GLK1(2) ---------CBF   --------->AHL20(2)  ----------->GT1           <-----------GT1          <---------ARR14(1)   attgggcaatgaatttaattttattttttttggtgaagaagtgaatttaatttgattagattgtttaccatctgtgggataaatgcagagaatcttgtga  8974800                   <---------MYB46(3)                  --------->ALFIN1                             --------->ANAC58               <---------AtMYB61                               ----------->GT1      <---------WOX13(1)      --------->ANAC58                 --------->ANAC55(1)    --------->ATHB12          --------->ANAC46                 --------->ANAC46               <------   <---------YAB1 <---------AtMYB61     --------->MYB52(1)     --------->ANAC58               -------   <---------AHL20(2)         --------->ANAC58                 <---------ANAC55(2)  --------->MYB46(3)  --------->AHL20(1)         --------->SPL7                    --------->ANAC55(2)<-----------GT1  --------->AHL20(2)       <---------SPL7            <---------TOE2(3) --------->AHL20(2)    <-------  <---------AHL20(1)  <-------TEIL    <---------MYB52(2)    <------ZmHOX2a(2)---------->DOF2 <-------   agaatataattggtttggaggtggttcatcgaacgccaaaactaacaacaagcttaaggtcgatcacgtaaaaaaaaatgaaagtaaccaatttgatatc  8974900                                                                         --------->YAB1        <----------DOF2                                                 <---------YAB1 ---ARR11(3)                                                            --------->ICU4            --- -->ARR11(3)                                                    ---------->DOF2                  <--- --GLK1(1)   ----------->GT1                                    --------->MYB52(1)               <--- --CCA1(2)<---------ANAC46           <---------REM1(1)     --------->AHL20(2) <---------YAB1     <---   ttattttgggctatgtggataaacattttgtatacatagttgtagttagtccagacttgaatcaaataaaggccatgataaccattgtgaaggccattta  8975000                                                                                               <-----                                                                                             <-------         --------->DAG2                                                                   <---------ANAC46        ---------->DOF2                                                            ------>ZmHOX2a(2)  <------MYB46(1)                                                                 <------ZmHOX2a(2)  <------MYB83                                                         ----------->GT1    <---------ANAC58 ------>ATHB12                                                 <---------ZAT18   <---------ARR14(2) ------YAB1                      <----------DOF2               --------->ZAT18  <------ZmHOX2a(1) --- ------TOE1(3)            <---------AtLEC2           <----------DOF2  <---------ZAT6      <---------ANAC58 ------TOE2(3)           <------NtERF2            <-----------GT1<---------ANAC46--------->ARR14(2)   agattggtccaaaagttggacatgggccgcatggcctttttatctgtgtttttttcttttcagagtggcctagtggaaaataggatccaatttcgtatgt  8975100  Previous    Next  AGI:  At1g25540.1    Description:  PFT1 (PHYTOCHROME AND FLOWERING TIME 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO42104.1); contains InterPro domain von Willebrand factor, type A (InterPro:IPR002035) Range:  from: 8969052    to: 8974647    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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