Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------YAB1                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                  <---------YAB1                                                                 --------->YAB1                                                                 --------->TOE2(3)                                                               <---------YAB1                                                               <---------TOE2(3)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                     <-                                                         <---------AHL20(2)                       <--                     --------->O2                        --------->AHL20(2)                       ---                     ----------->RAV1(2)                 --------->AHL20(1)                       <--                     <---------At4g35610                 <---------AHL20(1)                      ----              --------->KAN4(2)                         --------->AHL20(2)                       ---- <---------TOE2(3)   <---------ZAT2                     <---------AHL20(2)            <------ZmHOX2a(2) ----->At4g35610    ------>NtERF2                    <---------AHL20(2)      --------->ZAT14     <--- ------At4g35610   <---------ALFIN1                 --------->AHL20(2)       <---------ZAT14    ----- ----GAMYB   <---------KAN4(1)       --------->YAB1 <---------AHL20(2)       <-------TEIL   ---------   gttgagatagatagaatattgccacctgattttagttattcatcaattttagaattaaataaattaatattaatataagtacagttggatcaaatcaaat  8961700                                      --------->GLK1(1)                                      <---------GLK1(1)       <-------TEIL              <---------ATHB12     --------->TOE2(2)          ------>MYB46(1)  --------->AHL20(2)            ------>MYB83                                            --------->AHL20(1) --------ICU4                  --------->WOX13(1)                                       <---------AHL20(2) -------YAB1                ------>NtERF2                         <---------AHL20(2)    <---------AHL20(1) ------>AHL20(2)           --------->DEAR3(1)          <---------AHL20(2)         ----------->GT1 -------AHL20(2)        --------->ANAC58          <---------AHL20(2)              --------->ANAC58 ----->AHL20(2)         --------->ANAC58    --------->WRKY18(1)  --------->AHL20(2)     --------->AHL20(2) ----->AHL20(1)         --------->ANAC46   <--------ZAP1<---------AHL20(2)        --------->ANAC58 ------AHL20(1)   <---------ATHB12--------->YAB1 <---------AHL20(1)        <------ZmHOX2a(1) ---->YAB1    <---------ANAC58--------->MYB46(3) <---------AHL20(2)        ----------->GT1          < >AHL20(2)    <---------ANAC58--------->AtMYB61  --------->AHL20(2)       ----------->GT1<---------AHL20(2)   ataattacatacgtttgcgaatcaattcgccaccaatcagaaatcggtcaatttttttttatttgtataaaatagtaggataaaacgaaataaaatttag  8961800                                                                                          --------->YAB1                                                                                         <---------ATHB12                                                                                 <---------ANAC58                                                         --------->ANAC55(2)     <---------ANAC46                                                         <---------ANAC55(1)     <---------ANAC55(2)                                                         <---------ANAC55(2)     --------->ANAC55(2)                             <---------ATHB12            <---------ANAC46        <---------ANAC55(1)                           --------->WOX13(1)            <---------ANAC58        <---------ANAC58       <----------ID1   --------->ANAC46                 <---------ANAC58        <---------O2      <---------------------WRI1                        <<<<<<<<<NAP          <---------MYB52(1)  <--   --------->CCA1(2)    --------->ANAC58              --------->TOE2(2)     --------->ANAC46<-------- ---------TOE2(3)       --------->ANAC58  <---------CCA1(2)     <-----------GT1  --------->O2   -----   ttgagataagcgaaaaatactaaaatacccaatcagttttgagcatctctcaaaaacttacgtgttatactattctaaacgttacgtctcaatcgtgatc  8961900       --------->MYB59                                --------->ANAC58    ------------>MYB.PH3(2)                           <---------bZIP60(1)       <----------ID1   --------->ANAC58    ---------->DOF2                --------->ANAC58      --------->MYB52(1)   --------->ANAC58----------->GT1                 ----------->HVH21   ----------->RAV1(1) --------ID1<---------YAB1    --------->ICU4       ----------->TGA1   --------->MYB46(3)    --------- -YAB1 --------->MYB52(2)     <---------YAB1 --------->ANAC58    --------->ANAC58           <-------- ->ZmHOX2a(2) ---------->DOF2<----------DOF2 --------->ANAC58    --------->ANAC58        <-----------GT1   gcgacaagttagttatcaaagaagtaaaagtctttattgttttgctcgagcaagtgacgcaagtcgcaaacaacaacacaagggaacaaattaacatctt  8962000                                                                    <------ZmHOX2a(2)                                                           ------->MYC4                                                           ------->PIF5                                                           <-------MYC4                                                           <-------PIF5                                                          --------->PIF3(3)                                                          --------->O2                                                      <<<<<<<<<GATA-3                                                  ------------>CBF --------->ARR14(3)                                                  <---------YAB1   <---------ARR14(3)                                              <-------GAMYB<-------MYC2                                              ======================MYC_MYB                                           =========================MYC_MYB                                           <---------ANAC58------->MYC3                                           <---------ANAC58<-------MYC3                                           <---------ANAC46------->MYC2                                          <------MYB46(1) <---------PIF3(3)                                          <------MYB83<<<<<<<<<GATA-1                         ----------->RAV1(1) <---------MYB46(3)    --------->ARR11(3)                       --------->TCP15(2) --------->MYB55(2)       <---------ARR11(3)                      --------->PCF2      --------->MYB52(2)     ----------->ARR10                      <---------TCP20     <---------MYB46(3) ----------->GT1                      <---------TCP15(1) <---------AtMYB61--------->TGA1a                     <---------PCF2      <---------TOE1(2)<---------O2                     <-----------HVH21  <---------MYB52(1)================================bZIP_DOF                 <---------LBD16 <---------AHL20(2)   <<<<<<<<<GATA-4           <------MYB83--------->TCP23--------->ATHB12<<<<<<<<<GATA-2------>ZmHOX2a(2)           <------MYB46(1)       --------->AHL20(2) --------->WOX13(1)                --------->YAB1 >ARR11(3) <---------ANAC46<---------ALFIN1<-------GAMYB  <---------TGA1a           --------->GLK1(2) -ARR11(3)--------->MYB59<---------ALFIN1<---------TOE2(2)--------->ANAC46     ---------->DOF2   ctaaactcaagttgggttttctgggtcccacacattaaaatcgttggttgttatcaatccacgtggtaagatcttaagggttaaagaatcagaatcaaat  8962100                                                   <-------TEIL                                                --------->KAN4(1)                                                --------->HSFB2a(1)                                                <---------KAN4(1)                                                <---------HSFB2a(1)                                 <                                                <---------HSFC1(2)                       --------->AHL20(2)                                                --------->HSFC1(2)                  <---------MYB52(1)            *TSS                   <---------At4g35610   <---------ANAC46          <-------GAMYB-----          --------->LBD16     <----------DOF2  <---------KAN4(2)                  ----------->GT1  <-   ------------>CBF      <-------TEIL      <---------At4g35610                    <---------ZAT6-----   ------>MYB46(1)    <------ZmHOX2a(1)----------------------->TaNAC69(2)      ------>NtERF2   <-----   ------>MYB83   ---------->DOF2 <-----------GT1--------->KAN4(2)         <---------ETT(2)   <------   tcacctacaatccccaaaaaaaaaggattcatcttttagctcttcagcgaatgttcgtctcgtctatttgctctctctcgacgactgttaattaactccg  8962200 <---------WOX13(1) -------GAMYB                                                                              <---------AHL20(2) ---->LBD16                     --------->LBD16           <-----------GT1                 --------->AHL20(2) --------MYB46(3)               ----------->GT1      <---------MYB52(1)              <------NtERF2 ->NtERF2                     <---------LBD16      <---------ANAC58                --------->DEAR3(1) ----DEAR3(1)               --------->DEAR3(1)     <---------ANAC58      <---------At4g35610  <------ ---LBD16         <----------DOF2<------NtERF2     <---------ANAC46------>ZmHOX2a(1)------>NtERF2   gcgattgatcactccgtcttctttgtaacacagccggagaaaaatcgaaagtttcgtttttttcttctccttcgtagctaattcgccgtcgattttataa  8962300                                                                                                   <-                 <---------ARR14(2)                                                               <--           --------->ZAT2                                                                         <--           --------->At4g35610   ---------->DOF2         --------->ZAT14                         >>>>    <------NtERF2--------->ARR14(2)                      <---------ZAT14            --------->GLK1(2)   --------->RAP2.6(2)       <---------ZAT6           ----------->GT1           <---------At4g35610<- --------->At4g35610         ----------->GT1      <---------LBD16           --------->ALFIN1     >>>> <---------At4g35610  <---------AtLEC2          <---------LBD16      --------->GLK1(2)          ----- ---YAB1   <---------ZAT2 <--------P     <---------TOE2(3)          <---------GLK1(2)          <-----   ttcggcagccatgagctcggttttgcaggtagagtaaaagattaatgttttctggggagtaaactcgtaagaatcgttgtggagctaatctgggtttatg  8962400 --------MYB46(3)                                                                --------->At4g35610 -------WOX13(1)                                                                 <---------At4g35610 -------YAB1                                               ----------->HVH21    ----------->RAV1(1) >>>>>ARR1                                                 <----------ARF1    <---------At4g35610 ----------RAV1(1)                                       ----------->GT1      --------->ZAT14 >>>>>ARR2                                <----------DOF2<------MYB83         --------->At4g35610 ---->ATHB12              <-----------HVH21      <---------ANAC46          <---------At4g35610<------ ----YAB1           <-----------GT1  ----------->HVH21   <------MYB46(1)   --------->At4g35610<------   attgttggggttttatagggttttacgaagtcacttgctatgacctttgtatcggagattggtgacaagacgtttttcgctgcagcagtaagtgtttcgt  8962500                                 --------->ANAC55(2)                             <----------DOF2                                  <---------AtLEC2                            <---------ANAC58                             <----------DOF2                            <---------ANAC58                            <---------ANAC46        <----------DOF2  ---------->ID1                           <---------WRKY12 ------>ZmHOX2a(1)     <-----------RAV1(1)              <---------------------WRI1 ------->TEIL ---ANAC58         <---------GLK1(2)                 <---------TOE1(3)  <---------ANAC58 ---ANAC58         --------->ARR11(3)                <---------TOE2(3)  <---------ANAC58     --------   ctcctcttcgctttagttttagattttgttgcttcatgtaatctattgagggtttaaggtcgatgaagtcaatggcttttacatgaatcgaagtctaaag  8962600  Previous    Next  AGI:  At1g25520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42107.1); contains InterPro domain Protein of unknown function UPF0016; (InterPro:IPR001727) Range:  from: 8962112    to: 8964551    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version