Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ----------->HVH21                                                                            <-------MYC4                                                                            ------->PIF5                                                                            <-----------HVH21                                                                            ------->MYC4                                                                            <-------PIF5                                                                            ------->MYC3                                                                            <-------MYC3                                                                            ------->PIF4                                                                            <-------PIF4                                                                            ------->MYC2                                                                            <-------MYC2                                                                           <---------ANAC55(2)                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                           <---------TGA1a                                                                           <---------O2                                                                           --------->bZIP60(2)                                                                           --------->O2                                                                           --------->TGA1a                                                                         ------------->DYT1                                                                         <------------OsbHLH66                                                                       <-----------HVH21                                                                      --------->O2                                                                      --------->TGA1a                                                                      --------->bZIP60(2)                                                                      --------->ANAC58                                     <---------TGA1a                  --------->ANAC58                                     <---------O2                     --------->ANAC55(1)                              <------ZmHOX2a(1)                       --------->ANAC46                            <---------TOE2(3)                     <-----------HVH21                        <----------DOF2    --------->ALFIN1      ----------->HVH21 <------ZmHOX2a(1) --YAB1 <---------ALFIN1=======================bZIP_DOF      --------->MYB52(1) <-----------RAV1(2)   ttggaattcgacactcttgggattgtctttgaggatgagacgagagtgttccatgaacgaagagaacgggacacggcacgtgacaggaggtttgtagcaa  8940000                          <---------ANAC46                     <---------ANAC58                     <---------TGA1a                     <---------bZIP60(2)                     ===========================================bZIP_DOF                     <---------ANAC55(2)                     <---------ANAC58                     <---------ANAC46                     --------->ANAC55(2)                  <---------SPL7                 <---------DEAR3(2)                      --------->ARR11(3)      --------->ARR14(2)                --------->ANAC46                         <---------ARR11(3)   <---------TOE2(3)             --------->ETT(2)                           --------->YAB1  <----------ID1         --------->ANAC58 <---------ANAC58           ---------->DOF2    <------ZmHOX2a(1)           -         --------->ANAC58 <---------ANAC58  ----------->GT1       ---------->DOF2<---------ARR14(2) -    --------->ZAT18 <-------TEIL         --------->MYB52(1)      <------ZmHOX2a(1)--------->CCA1(2) <    <---------ZAT18 --------->SPL7       <---------DOF5.7(2)   <---------TOE2(3)<------ZmHOX2a(1)  --   gagtagtccacaaggtagacggtacgtggcttggacatgaagtaaacggttgaaacaaagataataaggaaagaggaacaaaggatatgaagaagctcga  8940100                                                                     <---------YAB1                                                                     ----------->HVH21                                                               <--------P                                  <---------TCP20             <-------GAMYB            --------->ANAC58      --------->ARR14(2)         <---------MYB46(3)            --------->ANAC46      --------->PCF2             <---------DEAR3(2)            --------->ANAC58    --------->LBD16             <---------DEAR3(1)  <---------ANAC58             <---------HSFB2a(2)         <------NtERF2  <---------ANAC58             --------->HSFB2a(2)        ------>NtERF2  <---------ANAC46            <---------LBD16             ------------>AtMYB77 -------->ZAT14        <-----------ARR10                 <---------DEAR3(1) -------->ZAT18        --------->GLK1(2)                 --------->ETT(2)        ---------->DOF2   <- ---------ZAT14        <---------ARR14(2)             <---------DEAR3(1)       --------->YAB1 <------ZmHOX2a(1) ------->ALFIN1       <---------GLK1(2)        --------->GLK1(2)   --------------->AGL15    <--------   agtggagtgagttcaagacactgagaatctcttccggacccattcggagaagctcgatggcgacggttgctatgactggaatcaaaagaagagtaaggaa  8940200                                                        --------->GLK1(1)                                                    --------->HSFB2a(2)                                                    <---------HSFB2a(2)                                                <---------ZAT2                                                --------->At4g35610                                 -                                                --------->ZAT2                                      <                                            --------->ANAC46                                      <--       <---------TOE2(3)                <-----------HVH21                                         ---       <---------TOE1(3)      <---------AHL20(1)--------->GLK1(1)                               <----       --------->DAG2       >>>>>>>>>MYB98 <---------LBD16                                 --------->YAB1 --------MYB46(3)   ------->GAMYB    <---------TOE1(3)  <---------GLK1(1)                 <---------YAB1 -TOE2(3)--------->ARR11(3)<-----------GT1--------->MYB52(1)        <---------HSFB2a(2)   <---------ATHB12   gttgttgataaggtattggtaaccgagtttaacatatttaagcttcacggagctcgagaaatcagacattttggaagagttttgctatgcctatgatgag  8940300                                                                                                   --                                                                                               <-----                                                                                             --------                                                                                             --------                                                                                             --------                                                                                           <---------ALFIN1                                                                                        <---------O2                                                                                        --------->TGA1a                                                                                        =============                                                                                        --------->O2                                                                                        =============                                                                                        =============                                                                                        <---------bZIP60(1)     <------ZmHOX2a(1)                                                                  --------->ANAC46 -------->ALFIN1                                   --------->At4g35610    *TSS          <---------TGA1a ---------AtMYB61                                  <---------At4g35610 <---------LBD16  --------->ANAC58 -------ANAC46                                     <---------ZAT2<---------AHL20(2)     --------->bZIP60(1) ------>ALFIN1           ---------->DOF2 ---------->DOF2      ----------->GT1           --------->ANAC55(1) -----ANAC46          --------->CCA1(2) <------ZmHOX2a(1)    <------ZmHOX2a(1)          --------->ANAC58   gtgtggaggaagaataggtttgggatataaaggagaaacagaggaaagttggcagatgggagaggagttaattttcggactcaaactctcacgccactca  8940400   <----------DOF2 ----->GAMYB                        <----------DOF2 ----WRKY38(1)                      <---------DAG2 ->ANAC58                          <---------ANAC58                          --------->ARR14(2) ->ANAC46                        <-----------GT1            ------------>CBF <---------ARR11(3) ->ANAC58                  --------->AHL20(2)          <---------At5g28300  <---------CCA1(2) =============bZIP_DOF     <---------AHL20(2)     --------->ATHB12<----------DOF2 ======MYC_MYB     <----------DOF2 <---------ANAC58   <-----------GT1  <-----------GT1 =============bZIP_DOF    --------->AHL20(2)     <---------YAB1 <---------ATHB12            <--------   acgctctttctctcgcttcgtctttctatttaattttgcttttttttttttatgatttactgtccaatctttttttctatatctgtgtttccagttgttg  8940500             --------->ATHB51                         <----------DOF2             <---------ICU4                        ------>MYB83             --------->YAB1--------->ICU4          -------->P            <---------ATHB12         ---------->DOF2 <---------DAG2            <---------ATHB51     <----------ID1    ------>MYB46(1)            --------->ICU4 <---------YAB1        <---------MYB111(1)       --------->TOE2(3) <---------ICU4          --------->MYB46(3)      --------->ANAC58   --------->YAB1          <---------MYB59      --------->ANAC46   -------->HAHB4          <---------MYB46(2)        --------->ATHB12      --------->ANAC58  <---------ATHB12         <---------MYB111(2)      <---------AHL20(2)    --------->MYB52(1)  --------->ICU4     <----------DOF2           <---------AHL20(2)       <------ -MYB46(3)--------->WOX13(1)   <---------LBD16<-----------GT1    <---------AHL20(2)   ---------->DOF2   ccagacaaacgtcaattatggagcaaatgattatggggaaaaagacttttaccaaccttttgctgttttaattcatttcattgagcctgaaagcattttt  8940600              --------->ANAC55(2)              <---------ANAC55(2)           --------->GLK1(2)                  <---------ZAT18      ---------->DOF2                         --------->WRKY38(1)             <------ZmHOX2a(2)   <---------HSFC1(1)                       <---------At4g35610         <---------WOX13(1)   ------>ZmHOX2a(1)                        <-------GAMYB             --------->ATHB12   --------->HSFB2a(2)                      --------->At4g35610  <------MYB46(1)   <---------HSFB2a(2)                  <-----------HVH21<-------TEIL<---------YAB1   --------->HSFC1(1)       <------ZmHOX2a(1) --------->WRKY12   <------MYB83--------->ARR11(3)  ---- ---AHL20(2)  ----------->GT1 ---------->DOF2 --------->ZAT14   --------->MYB59          ----------->GT1   ttttcctagaaagaatatgtaacaagagtaggaaaagagatttgtcagttgactcgatatacatgttcggtctgattgagatcaatgtgttttgtaaatt  8940700                                         <---------YAB1              --------->MYB46(3)                                       --------->ATHB51            ----------->RAV1(1)                                       --------->AHL20(2)       --------->ANAC46                   <-                                       <---------AHL20(2)  ----------->HVH21                      <--                                    --------->YAB1   --------->AHL20(2)--------->At4g35610    <------          <-------TEIL     --------->LBD16       ----------->GT1--------->ANAC58           <--------- ------->GT1   ----------->GT1 <-------TEIL  <-----------GT1    --------->ANAC58           <---------AHL20(2)   tgtaatacaaggttcagaggttatacatccaggtacaagaattattttttcccgttaaaatgtgaccagcaacagctatattttgttgaaaatttacttt  8940800                                                                                                  <--                                                                                                 <---          <---------AHL20(2)                                     <----------DOF2        <----------DOF2         <---------AHL20(1)                            --------->At4g35610           <---------AHL20(2)         <---------AHL20(2)                        --------->ARR11(3)            <---------ICU4  ---- --------WOX13(1)                                  <---------ARR11(3)           <---------YAB1   <--- -------AtLEC2  <---------ANAC46                  --------->RVE1(1)             --------->ICU4  ----- ----DOF2--------->AHL20(2)                       --------->CCA1(1)       <-----------GT1      <----- --GT1   --------->AHL20(1)              ----------->GT1  <-----------GT1--------->AHL20(2)--------->YAB1   gaatgacaaaataaaattgtgggtttactatatcaacaaaaacttgtgaaaaatatcatctaaccttctttaaaattaactcattattttctttgatatt  8940900  Previous    Next  AGI:  At1g25450.1    Description:  very-long-chain fatty acid condensing enzyme, putative. Identical to 3-ketoacyl-CoA synthase 5 (KCS5) [Arabidopsis Thaliana] (GB:Q9C6L5;GB:Q84W57;GB:Q8L8L0); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT2G16280.1); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT1G19440.1); similar to CUT1 (CUTICULAR 1), acyltransferase/ catalytic [Arabidopsis thaliana] (TAIR:AT1G68530.1); similar to 3-ketoacyl-CoA synthase [Gossypium hirsutum] (GB:ABA01490.1); similar to unknown [Populus trichocarpa] (GB:ABK94727.1); similar to hypothetical protein [Vitis vi Range:  from: 8938466    to: 8940374    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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