Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------SPL7                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                   --------->ALFIN1                                                                                  ------->PIF5                                                                                  ------->MYC3                                                                                  <-------MYC4                                                                                  ------->MYC4                                                                                  <-------MYC3                                                                                  <-------PIF5                                                                                  ------->MYC2                                                                                  <-------MYC2                                                                                 <<<<<<<<<<HY5                                                                                 >>>>>>>>>>HY5                                                                                 <---------TGA1a                                                                                 --------->PIF3(3)                                                                                 <---------O2  <-----                                                                                 --------->O2  ======                               <---------LBD16                                   ====================                         <---------------AGL15                                   --------->TGA1a                         --------------->AGL15                                   <---------bZIP60(2)                       --------->YAB1                                            --------->bZIP60(2)                  ------>ZmHOX2a(1)     --------->ANAC46                       <---------ALFIN1<-----                 --------->TOE2(3)      --------->ANAC58                     <----------------PIF3(2)                ------>ZmHOX2a(2)       --------->ANAC58               ====================MYC_MYB                =========================HOX2a_HOX2a                   -------->P<---------PIF3(3)              --------->ARR14(2)        --------->bZIP60(2)         <---------ANAC58  <---------ANAC58              <---------ARR14(2)  <------ZmHOX2a(1)                 <---------ANAC58 <------NtERF2   tcatagttgtctgtctgatcctcaatactaatatcaggaaccaagtcatgaaatatcgacgaattgtttttcttaccagagccacgtggcgttcgagctt  8935000                        --------->ETT(2)                        <---------RAP2.6(2)                       <------NtERF2                     --------->ALFIN1                    ------->MYC4                    <-------MYC2                    <-------MYC4                    <-------MYC3                    ------->MYC3                    ------->MYC2                    <-------PIF5                    ------->PIF5                   --------->O2                   >>>>>>>>>>HY5                   <---------PIF3(3)                   ==============================================MYC_MYB                   <<<<<<<<<<HY5                   --------->PIF3(3)                   <---------TGA1a                   <---------bZIP60(2)                   --------->TGA1a                                           --------->LBD16                   <---------O2                                              ------>NtERF2                   --------->bZIP60(2)                --------->MYB55(2)    --------->DEAR3(1)               ----------------->PIF3(1)              <---------MYB46(3)   <---------LBD16              --------->bZIP60(1)                <---------YAB1          ============================           ----------->HVH21                <---------At4g35610  <----------DOF2          <-----------HVH21--------->bZIP60(2) --------->At4g35610       ------->GAMYB<---------RAP2.6(3)         --------->ANAC55(2)                --------->At4g35610  ==================================== ----DAG2<---------ANAC55(2)               --------->GLK1(2)     <---------DAG2      --------->RAP2.6(2) ============================bZIP_DOF<---------ANAC46<---------AtMYB61   --------->DEAR3(1) =====bZIP_DOF<---------bZIP60(1) --------->ALFIN1--------->ATHB12      --------->DEAR3(2) -----DOF2--------->LBD16------>NtERF2 <------ZmHOX2a(1)<--------P      --------->MYB46(3)   --------   tacgagtaaacccgtgatgccacgtggcgacctcatgtggaggagaagctgatgagtggttgctatgctttacgaccgccgggctagccgtcttcaaacg  8935100               --------->ANAC58               --------->ANAC58             --------->DEAR3(1)             <---------ANAC46            <------NtERF2            --------->ATERF1(1)           ------>NtERF2           <---------ERF1                                                              --------->MYB46(3)          <---------RRTF1(3)                                                     --------->ZAT14          <---------RAP2.3(3)                                                    --------->LBD16          <---------DREB2C(2)                                                  <---------LBD16          <---------RRTF1(2)                                                   <------NtERF2          <---------RAP2.6(2)                                                  ------>NtERF2          --------->ATERF1(2)                                                 <---------ATERF1(1)----          <---------ANAC46                                                    --------->RAP2.6(2)----          <---------DEAR3(1)                                                  --------->DEAR3(1) ----          <---------ATERF1(2)                                                <---------DEAR3(1)  ----          <---------RAP2.3(2)                                               <------NtERF2        ----         <---------ABI4(1)                                                  --------->ATERF1(1)  <---         <------NtERF2                                                     <---------ATERF1(1)  -----         --------->ATERF1(1)                                               <---------DEAR3(2) <------     <---------O2                                                          ------>NtERF2<---------ALFIN1     <---------TGA1a                         <-----------HVH21             <---------SPL7     <------     --------->O2                           <-----------RAV1(1)         <-----------HVH21  --------->DEAR3(1)     <---------ANAC58                    --------->MYB52(1)       --------->ANAC58    --------->SPL7     <---------ANAC58                    ------>MYB46(1)          --------->ANAC58  -----------------     --------->TGA1a                     ------>MYB83           ---------->DOF2--------->ATERF1(1) ==============MYC_MYB      --------->At4g35610                 ===================================== ==============bZIP_DOF     <---------At4g35610            ---------->DOF2<---------DEAR3(1)  ------- ->MYB52(1)<---------RAP2.3(1)         <---------MYB59     ==========================================   gactctctcgtggcggcgagcaagagggtttgctgaatggaccaaactgtcgcaagactggcaaagaaaagcatcgtcggccgcgcagtaccaccgtgca  8935200           --------->ZAT2       --------->ANAC58       --------->ANAC46                                                                           ---       --------->ANAC58                                                                           ---    <---------REM1(2)                                                                        -------- ----->ANAC58                                                                              ------>MYB83 ----->O2  <---------At4g35610                                                             ------>MYB46(1) ----->TGA1a                                                                             ------->GAMYB ----->ANAC58 <-----------HVH21                                                          --------->AtMYB61 ----->ANAC46 <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                          <---------MYB52(2) ------TGA1a <-----------RAV1(1)                                                        --------->MYB46(3) -->TEIL   <---------ZAT2    --------->DEAR3(1)                                         <---------MYB55(2) ---ZAT14  --------->At4g35610                                   --------->ATHB12      --------->ANAC58 ---ZAT18  ----------->RAV1(2)------>NtERF2                      <---------ICU4        --------->ANAC58 ------>TaNAC69(2)        --------->ANAC46                      --------->ICU4         --------->ANAC46 ======bZIP_DOF     --------->ANAC58                            <---------YAB1     --------->ANAC46 -->ZAT14 ------->TEIL  <---------ATERF1(1) ------->GAMYB <----------DOF2  ---------->DOF2----------- ======bZIP_DOF     --------->ANAC58     ----------->RAV1(1)  --------->YAB1      <---------REM1(2)--   cgtctcttcacgcagctgtcgcaagccctcgccgtcttcgctccaacagcattcgccaaacttttcatcattgtatacaaagtctacacaaccaacatca  8935300                                        <--------ATHB1                                        <---------ICU4                                        -------->ATHB1                                        --------->ATHB51                                        --------->ATHB12                                       <---------ATHB12                                       <---------ATHB51         --------->ANAC58              <---------YAB1      --------->ZAT18             --------->YAB1                                      ------>ZmHOX2a(1) ------>ANAC46               <------ZmHOX2a(2)                                        <---------HSFB2a(2) ------>MYB46(3)  <---------AtMYB61    --------->ICU4                          <---------ZAT18 ->TOE2(3)      <----------DOF2   --------->TOE2(3)                         <---------ANAC46 >RAV1(1)--------->ANAC58   --------->ARR11(3)------->TEIL       --------->DAG2--------->ZAT14 ----->GAMYB <---------ARR11(3)--------->WOX13(1)<----------DOF2---------->DOF2<---------ZAT14   <---   acgacaagagcacgagagctttggttttgagatcaatctcaattattgaatcttttgctctctgcaaaaagttagatttagtgtagtcctagagagtttg  8935400                                                                                  <---------ANAC46                        <---------ZAT18                                           <---------ANAC58                   ---------->DOF2                                                <---------ANAC58               --------->LBD16                                              <----------DOF2              --------->ANAC58        <-----------HVH21                     <---------DAG2             <---------LBD16    <----------DOF2                           ------->TEIL             <<         ----------->HVH21     <---------DAG2  *TSS                    <---------ANAC55(2)         <<       <------ZmHOX2a(1)--------->ZAT18   <---------At4g35610          --------->ANAC55(2)         <- ------TOE2(3)--------->ANAC58----------------->AG                    --------------->AtSPL8       >>   agattaagaggatgacccgcatgaagcgcattcccttttgtgtcagtggatttttgaagttataagaaaaattatgtactttttgggtgtttatgtcttc  8935500          ----------->TGA1            <---------ANAC58                              <---------GLK1(2)          ----------->HVH21           <---------ANAC58                             --------->At4g35610     <---------TCP15(1)              <---------MYB46(3)                            <---------At4g35610     --------->PCF2                  <------MYB83                              <-----------HVH21 --------->MYB59                     <------MYB46(1)                <---------ZAT6 <---------ZAT2 <<<<<<<MYB1 <---------O2          <---------WOX13(1)    ------>ZmHOX2a(2)  <---------WOX13(1) <<<<<<<MYB2 <---------bZIP60(2)  <------------CBF     <---------ARR11(3) --------->ATHB12 --------MYB52(1)                --------->ATHB12      --------->ARR11(3)<---------AHL20(2)   ------- >>>>>>>>AtMYB44 ------>NtERF2  <---------YAB1         <-----------ARR10 <---------YAB1 <----------DOF2   agttagggacccatgacgaggccttatctgatttgtgattggttgagttctgaagatgatcttcgtaatagtgttttaattggtcagcttctttatccat  8935600              --------->ETT(2)        <---------ANAC46        <-----------RAV1(1)                                                                         <        <---------ANAC58                                                                            <        <---------ANAC58                                                                            -    <---------ANAC58          <---------ANAC58                                                     <-    <---------ANAC46          <---------ANAC58                                                   ----    <---------ANAC58  ---------->ID1         <----------DOF2                                     <--- --------->GLK1(1)<---------ANAC58     <---------ATHB12                        <---------YAB1   <---- <---------GLK1(1)<---------ANAC58   --------->WOX13(1)<-----------GT1<----------DOF2       <-------- -->ATHB12<---------AtMYB61<XXXXXXXXXXXXXXXXXXXXMIR3440B-3P           <---------DAG2     <-----------GT1   tggatttcttgtgtggtctaccttgtcgttttccttgcccaatcactcttttttttttttcaatattcaagactttttgtgatttttgttatttcttttt  8935700 ----------DOF2 ---------------AGL15                <-----------GT1 -------------->AGL15                ---------->ID1 ----------------AGL3      ----------->HVH21                           --------->YAB1 --------->WRKY45 ------>ID1              <----------DOF2<----------DOF2               <---------AHL20(2)         ---- --------GT1           <---------At4g35610                           --------->AHL20(2)      -------- -------GT1            --------->At4g35610             <---------AHL20(2)           <----------DOF2 < --DOF2        <---------TOE2(3)    <-----------GT1    --------->AHL20(2) <---------ICU4    <--------   tcctttttttagtagcaaaggtttcagctttgacattttttccttttcttccaccatttttttagagactatataataactactaactttgactatggat  8935800                                           <---------ANAC55(2)                                           --------->ANAC55(2)      --------->AHL20(2)     --------------->AGL15      <---------AHL20(2)     <---------------AGL15                                      --------->TOE2(3)     <---------AHL20(1)     ----------------->AGL2                                    <-----------ARR10     <---------AHL20(2)     <-----------------AGL3                        <---------GLK1(1)     --------->AHL20(2)     ====================================================MADS_MADS  --------->AHL20(2)        <-----------------AGL1                <----------DOF2     --------->ARR11(3) --------->AHL20(2)         ----------------->AGL3              <---------------AGL15 <---------ARR11(3) <---------AHL20(2)         ----------------->AGL1  ------->GAMYB <---------DAG2      --------->AHL20(1) ----->AHL20(2)             <-----------------AG   <---------MYB52(2) <---------HSFB2a(2)        ---- --->GT1    --------->At4g35610           <---------ICU4        --------------->AGL15--------->CCA1(1) ---------AHL20(1)        <-----------GT1--------->ICU4        <-----------GT1       --------->RVE1(1) -TOE2(3)   <---------At4g35610    --------->MYB59 --------->MYB46(3) --------->HSFB2a(2)       -----   aaaataatttttttagctaaatagtttttctccaattttggtaatacttatcaacaaacattgattcactttttagaaatctgagaaatatcttagcaaa  8935900  Previous    Next  AGI:  At1g25440.1    Description:  zinc finger (B-box type) family protein. Identical to Zinc finger protein CONSTANS-LIKE 16 (COL16) [Arabidopsis Thaliana] (GB:Q8RWD0;GB:Q9C6L4); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT1G68520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42139.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 8933703    to: 8935447    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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