Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ------>MYB46(1)                                                                              ------>MYB83                                                                            <---------MYB111(2)                                                                            --------->MYB46(3)                                                                            <---------MYB111(1)                                                                            <---------MYB55(2)                                                                            --------->AtMYB61       <                                                                        --------->MYB46(3)          -     --------->LBD16                                     <---------WOX13(1)--------->MYB46(3)  <-----    <---------LBD16                                   <---------YAB1    ------>ZmHOX2a(2)      <-----    <---------HSFB2a(2)      <-----------HVH21      <---------ANAC58  <---------ARR14(2)     --------   ------>ZmHOX2a(2)       --------->LBD16          <---------ANAC58  --------->ARR14(2)   --------->HSFC1(2)   <---------LBD16<------ZmHOX2a(2)           --------->REM1(2)<------ZmHOX2a(1)      <---------LBD16  <------ZmHOX2a(2)      <---------LBD16<---------DEAR3(1)     ================HOX2a_HOX2a <---------HSFC1(2) <---------ARR14(2)    --------->ARR14(2)  <---------ANAC46    ===============HOX2a_HOX2a  --------->HSFB2a(1) --------->ARR14(2)    <---------ARR14(2) <------NtERF2--------->ATHB12<------ZmHOX2a(2)   <---------HSFB2a(1)   ctcgatccgggagagaatggatcaatatccgggtcaaaacgctcggcgagtagagcgtgattgaaggagttggatccaccaactacaatcgggagtttct  8914800                                                                                     <---------HSFB2a(2)                                                                               --------->DEAR3(2)                                                <-----------RAV1(2)            <---------MYB52(2)                                               --------->ZAT2                 <---------At4g35610                                      --------->ANAC58                 --------->MYB55(2)                                      --------->ANAC58                 <---------MYB46(3)         ---                                  <---------MYB52(2)        <-----------GT1   --------->At4g35610<---                                ---------->DOF2<---------ZAT2<---------At5g28300----------->HVH21<--- ---------HSFB2a(2)           <------NtERF2    <---------ZAT14        <---------ANAC46          <---- -------->HSFB2a(2)          ------>NtERF2<---------GLK1(1)<---------ZAT14   <---------ARR14(2)<----- ----ANAC58                 <---------ETT(2)   --------->ZAT14 --------->DEAR3(1)    --------->HSFB2a(2) ----ANAC58              --------->ALFIN1 --------->GLK1(1)--------->ZAT18   --------->ARR14(2)------ ->GLK1(2)              >>>>>>>>>SUP--------->MYB52(1)     --------->ZAT14--------->ALFIN1  ---------   tgctagaaattagtttagagatggacagtgtcgccaaagaacggaactctgcaggggtgagttcaccgtcttgtgggtggaactgacctagaagatggtg  8914900                                                                                           ----------                                                                                           <------NtERF2                                                                                          ------>NtERF2      ------>ZmHOX2a(1)                                                                   --------->LBD16 --------->GLK1(1)                                                                       <---------ANAC46 ------>LBD16                                                                           <------NtERF2 ------ANAC58                                              --------->CCA1(2)            <---------LBD16 ------ANAC58                                             --------->ARR14(2)          <---------DEAR3(1) -----LBD16                                           --------->REM1(2)             ------>ZmHOX2a(2) ----ANAC46                 ----------->ARR10  --------->ARR14(2)                 <---------ARR11(3) --->ALFIN1          --------->ALFIN1          <---------ARR14(2)                 --------->ARR11(3) >ALFIN1           <---------ANAC46     --------->GLK1(2) <---------ARR14(2)    <---------YAB1    ---   cgggactcctccttgctcatgcagtgggattagatttgtgacaatctcgaatcccttgtagatttgcattttgtccgagtttatgatctcggcgggaaaa  8915000                                 <---------ANAC46                                 <---------ANAC58                          ----------->HVH21                        <---------O2                        --------->O2            <------ZmHOX2a(2)    <---------ANAC58           <---------ARR14(2)    ----------->RAV1(2)                       <---------ARR11(3)           --------->ARR14(2)<---------ANAC58                          --------->TOE2(3)           <---------ARR11(3)<---------ANAC58                    --------->TOE2(3)         <---------AtLEC2           --------->ARR11(3)<---------bZIP60(2) --------->TOE1(2)   <---------YAB1 --------->ANAC58    --------->ALFIN1    <---------ANAC46       ------->TEIL      <---------DAG2     --------->ANAC46 ->GT1<------NtERF2     <---------ANAC58    <---------REM1(1) <---------ALFIN1      --------->ANAC58 ------>MYB52(1)        <---------ANAC58  <-------GAMYB      --------->MYB46(3)   <-----------GT1   -   aaacgggtggcaagatcgactgagaggcgtgacttgcctgtgcctgttgtacctgtgatgagaaccaccttatccttgatatttttacgccctgcatggc  8915100                                             --------->ALFIN1                                          <---------DREB2C(2)                                          <---------DEAR3(1)                                          <---------ANAC46                                       ----------->TGA1                                  <------MYB83                            <---------MYB46(3)                                  <------MYB46(1)                         ----------->GT1                              <---------ARR14(2)                         <---------ANAC46    --------->ANAC58          --------->ARR14(2)                         <---------AtMYB61    --------->ANAC58      <-----------------AGL1                         --------->ALFIN1      <-----    --------->ANAC46      <-----------------AG<---------MYB46(3)       <---------MYB46(3)      <-----   ------->TEIL       ----------->HVH21----------->HVH21              --------->ALFIN1<-----------HVH21 -------->AtLEC2 --------->YAB1  --------->MYB59    <------ZmHOX2a(1) <---------AtMYB61   --------->ICU4   ccatgcacgtagtgactaatcgtggtgacccgaatttggtagtgacggtgggaaggagagaagaatgagagagtggtggtgataacaaggtcatgagttg  8915200                                                                          <---------AHL20(2)                                                                       <---------AHL20(1)                                                  <----------DOF2      --------->AHL20(1)                                                 <---------ANAC58      --------->ARR11(3)                                                 <---------ANAC58      <---------ARR11(3)       <----------DOF2<----------DOF2   <-----------TBP       --------->ZAT14 ----REM1(1)    <----------DOF2        <----------DOF2        <---------ZAT14   <----------DOF2 ----- ----MYB46(3) --------->At4g35610      ------>ZmHOX2a(1) XXXXXXXXXXXXXXXXXXXXX>MIR828     --------->AHL20(2)   ttgcattttctttaacagctttctctttaacttaagctatccttttatatggctttcttctcacttaagtgaatatttttttctttaacaaaaaaaataa  8915300                    <-------GAMYB                                <---------ANAC58                  --------->MYB59       <-----------TBP          <---------ANAC58               --------->ARR14(2)       --------->AHL20(2)       <---------ANAC46               -----       <-----------GT1     --------->At5g28300               <---------WOX13(1)              --------   --------->AHL20(1)     ----------->GT1                   >>>>>>>>>ARR2                    --------   --------->ARR11(3)  <---------WRKY18(1)         <----------DOF2                           <-------   <---------ARR11(3) --------->WRKY12--------->ARR11(3)    <------------CBF              ------->GAMYB   <---------AHL20(1) --------->WRKY38(1)<---------AHL20(2)--------->ATHB12            <-----------GT1 ------>GT1    <---------ARR14(2)     <---------ARR11(3)  <---------YAB1               --------->MYB52(1)   gtgaatattttactccgaattcggttgactgtaaattttagattttatagtgtctttattttgattgtcttgtagtccctatttcaaattaacggagctt  8915400                                                           <---------ZAT2                        <----------DOF2                  --------->LBD16                 --------->YAB1                         <---------LBD16                 <---------ICU4                       <---------At5g28300 ------->CBF    <---------YAB1                       <-----------GT1 ->At4g35610    <---------ATHB12          <------ZmHOX2a(1)--------->ZAT2                  ------>ZmHOX2a(1) ->ZAT2   ----------->GT1    ----------->RAV1(2)  <---------ICU4            <---------ATHB12 --At4g35610  --------->WOX13(1)       <---------AtLEC2<---------LBD16  ------------>CBF------>ZmHOX2a(1)   caatttgttatcaagttaatcattctctttaacctggttttgcaggaacccatttttaccgggctgagaccatctccaatggagagagtcctcctatggg  8915500                 <---------TOE2(3)                --------->YAB1                <---------ICU4       ---------->DOF2                 <---------YAB1             --------->YAB1 --------->AHL20(2)                      <---------AHL20(2)            <---------AHL20(2)  ----------->GT1             ----------->GT1     <---------ATHB12      <------------CBF      <---------AHL20(2)        <---------YAB1--------->AHL20(2)   ------------>CBF     <---------YAB1      <---------At4g35610    --------->YAB1--------->YAB1<-----   ctctctccaattgtttaataatgtttttgataaattgttaaaagagagcttatgttttgattttgttaattttaatagtccaatggtaatctctctagtg  8915600                                               <-------TEIL                                       <-----------GT1                                     <---------WOX13(1)     --------->At4g35610                                   --------->ATHB12         <---------At4g35610                                  <---------YAB1     ---------->DOF2                               <- ----ZAT6   <----------DOF2       --------->ICU4 --------->TOE2(3)     --------->YAB1              --   gtagtctctctaaactttcatgttagaagaattgtcttgattaactacatacatcaaaagtcagcaaaattaagcatgatataaacaaatgtgtataagt  8915700  Previous    Next  AGI:  At1g25410.1    Description:  ATIPT6 (Arabidopsis thaliana isopentenyltransferase 6); adenylate dimethylallyltransferase. similar to ATIPT1 (ISOPENTENYLTRANSFERASE 1), adenylate dimethylallyltransferase [Arabidopsis thaliana] (TAIR:AT1G68460.1); similar to isopentenyltransferase [Brassica rapa subsp. pekinensis] (GB:BAE43826.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593) Range:  from: 8914178    to: 8915206    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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