Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ALFIN1              --------->WRKY12                            <---------MYB59                 ----------->HVH21   ------>ZmHOX2a(2)                          ------->TEIL                   <-----------RAV1(1)   <------ZmHOX2a(2)                          --------->SPL7              <---------ARR14(2)  --------->LBD16 ---------->DOF2                        --------->LBD16          ----------->GT1         <---------HSFB2a(2)                      <---------LBD16      --------->LBD16--------->At4g35610<---------GLK1(1)                    --------->ARR14(2)    --------->HSFB2a(2)     <--------P --------->GLK1(1)    --- >LBD16             <---------ARR14(2)    <---------HSFB2a(2)    --------->At5g28300  <----------ID1   tgagtcaagtatagaaatactaaatccggacctcactccgtcttccagagcctgtaaatctgttgacggtaagtcccagagatcggaatcgacaaaggaa  8903100                         <------NtERF2                         <---------At4g35610                         <---------ZAT2                        ------>NtERF2                       <---------ATERF1(2)                       --------->DEAR3(1)                       --------->ATERF1(2)                       <---------DEAR3(1)                <<<<<<<<<SARD1         <---------HSFB2a(2)         <---------At4g35610       <---------ANAC58                                               <--         --------->At4g35610       <---------ANAC58                                             -----       --------->REM1(1)<---------ATERF1(1)       --------->ANAC58                 --------->ANAC58      <-------TEIL   <---------RAP2.3(1)          --------->ANAC58               ---------->DOF2<----   --------->At4g35610<---------LBD16  --------->HSFB2a(2)                     <---------YAB1  ------   <---------At4g35610--------->ATERF1(1)      <------ZmHOX2a(1)            <---------YAB1     <----- ------>YAB1    <<<<<<<<<CBP60g  <-----------GT1 --------->GLK1(1)  <---------ZAT18--------->ANAC58<-   tcgtaagcttcatctccaaatttcgccggctgtttttgcttctcgagtaggaactcaacgtcgtctctagggctcttgatgatcaaagcaagtttcagat  8903200                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                   --------->GLK1(1)                                                      ------>MYB83            --------->ARR14(2)                                                         --------------            <---------ARR14(2)                                                         --------------        --------->At4g35610                                                      --------->ANAC58        <---------At4g35610                                                      --------->ANAC58    <---------ARR14(2)                                                          <---------ARR14(2)    --------->ARR14(2)    --------->TGA1a                                       --------->ARR14(2) ---------GT1      <---------GLK1(1)                                            --------->PCF5 ---->GLK1(1)  --------->YAB1               --------->At4g35610                ------>NtERF2 -----GLK1(1)--------->ARR14(2)             *TSS                              <---------ZAT18 ------- --->ARR14(2)--------->GLK1(2)       --------->At4g35610 <---------ANAC58   --------->At4g35610 ----GLK1(2)<---------GLK1(2)        --------->ZAT2      <---------ANAC58   <---------At4g35610    <- ----------------AGL1     <---------TGA1a  --------->DEAR3(1)            ---------->DOF2  ------>MYB46(1)   ttcccatttctgcagaatcggaattcacaagtgtgaagaagctcgccgatgaaagttttccttgtttttcaaagtttaagcggacccaaaccaaatcggt  8903300            <---------TOE2(3)               <---------ARR14(2)       <------MYB83 <---------ANAC58        --------->ARR14(2)      <---------MYB46(3)                  --------->LBD16 <---------YAB1    <---------MYB52(1)                  <---------LBD16  <---------AHL20(2) --->AG<------MYB46(1) <------MYB83     ----------------->AGL1 --->AGL1   <---------TOE1(3)  ------>ZmHOX2a(2)        --------->YAB1              --------->DAG2 <- ---->GT1<---------SPL7<------MYB46(1)<-----------GT1 <---------GLK1(2)            ---------->DOF2 == ----------GT1      <---------ANAC58--------->YAB1   <---------At4g35610  --------->CCA1(2)    <-----   taaaccgttgggttacggtttagcttggtttgatcgaattataccggattcagtcagattataatttgataatcagatagaggcaaaaagtgttcaactt  8903400                                            --------->At4g35610                                         --------->TGA2(2)                                        <-----------HVH21                                       <---------bZIP60(2)                                       --------->bZIP60(2)                                       <---------bZIP60(1)                                       <---------TGA2(1)                                       --------->bZIP60(1)                                       =============================MYC_MYB                                       >>>>>>>>>>HY5                                       --------->ANAC58                                       =================================bZIP_DOF                                       --------->O2                                       --------->ANAC58                                       <---------TGA1a                                       --------->TGA1a                                       <---------O2                                       --------->TGA2(1)                                       <---------ANAC46                   <---------MYB46(3)  <---------ANAC55(2)                 <-------GAMYB         --------->ANAC55(2)                 ================================MYC_MYB                <-----------RAV1(1)   <-----------STF1              <XXXXXXXXXXXXXXXXXXXXMIR863-3P<---------At4g35610              <---------ANAC46        ----------->STF1 <------------AtMYB77              <---------ANAC58      ----------->HVH21 ------>MYB46(1) <---------ARR14(2)          <---------ANAC58          ----------->TGA1  ------>MYB83    --------->GLK1(2)          =======================================MYC_MYB              --------->ARR14(2)          <---------ANAC58         <-----------HVH21 --------->MYB52(1) ---------DOF2<---------ANAC58    --------->ALFIN1 --------->MYB46(3)<---------GLK1(2)        ------>ZmHOX2a(1) ================================================bZIP_DOF        <---------LBD16           <------ZmHOX2a(2) -----DOF2<-------GAMYB  ----------->GT1<-----------TGA1 *TSS<----------DOF2       --------->AHL20(2)   tctttcttcttgggttgtgtgttgttgttgttaaatgtgtgacgtcatctcaaaccaactgtgcttcttcggaatctgtaagaaaaaaaatcgatccttt  8903500                                                                                 <---------WRKY38(1)                                                                                 <---------WRKY12                     --------->ANAC58                                           --------->WRKY18(1)                     --------->ANAC58                  <-------MYC2          <---------MYB46(3)                 --------->YAB1                        ------->MYC2          <---------DEAR3(2)                <---------ATHB12                       ------->MYC3         --------->ETT(1)        --------->DEAR3(1)              <----------DOF2<-------MYC3       <-----------HVH21       --------->DEAR3(2)--------->ANAC58           <---------ALFIN1      --------->ARR14(2)       --------->ATERF1(1)  ---------->DOF2        <---------REM1(2)      <---------ARR14(2)      <---------ATERF1(1)--------->ANAC58        <---------ETT(2)       --------->LBD16     <---------PCF5  --------->ANAC46  --------->TOE2(3)              <---------LBD16        <-------   cgactagggaccgcctaaatcatacgcaaacaaagtctcttcctttacccgtctacacgttcgaattttttctccgggtcgggtcaatgtcaagaacgac  8903600                              --------->LBD16                              <------NtERF2                            <---------LBD16                            --------->ATERF1(1)                         --------->ALFIN1                         ----------->HVH21                        <-------MYC3                        ------->MYC2                        <-------MYC2                        ------->PIF5                 ------>ZmHOX2a(2)                        ------->MYC3                <---------GLK1(1)              <---------ALFIN1                        <-------PIF5               <---------ARR11(3)             --------->LBD16                       <---------O2                --------->ARR14(2)            --------->ANAC46                       --------->TGA1a             --------->ARR11(3)           --------->ANAC46                       --------->O2                <---------AGP1           --------->GLK1(1)                       <---------bZIP60(2)        <---------CCA1(2)         <---------GLK1(1)                       --------->ANAC46       <---------At4g35610          <---------GLK1(2)                       <---------TGA1a        --------->At4g35610          <---------ARR14(2)                 <---------DEAR3(2)  <---------YAB1<---------ARR14(2)      --------->ARR14(2)   ----------->GT1     --------->ANAC55(2) <---------At5g28300            --------->At4g35610 ------- ---ID1  <---------AHL20(2) <---------ANAC46 <-----------RAV1(1)          <---------At4g35610<-------   gagaattgtatataatcgtcgattcacgtggccgggtttatcatttactgctggatctcgttttcaattttgagtcagattccccccaattgagagattc  8903700                                                                                   <---------ALFIN1                                                                                   --------->DEAR3(1)                                                                                  <---------ABI4(2)                                                                                  --------->ATERF1(1)                                                                                  --------->MYB46(3)                                                                                 ------>NtERF2                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                                --------->PCF2                                                                               --------->ATERF1(1)                                                                              <---------ATERF1(1)                                                                              --------->LBD16                                                                             --------->DEAR3(1)                                                                             <---------DEAR3(1)                                                                            <---------LBD16                                                                            --------->RAP2.3(1)                                                                            <------NtERF2                                                                            --------->ATERF1(1)                                                                           <---------ERF1                                                                           <---------RRTF1(1)                                                                           <---------RAP2.6(1)                                                                           <---------ATERF1(1)                                                                           ------>NtERF2                                                                           <---------RAP2.3(1)                                                                          <---------DEAR3(1)                                                                          --------->DEAR3(1)                                                                         --------->DEAR4(2)                                                                         --------->ATERF1(1)                                                                         <------NtERF2                                                                         --------->RAP2.6(1)                                                                         --------->RRTF1(1)                                                                         <---------ABI4(2)                                                                         --------->RAP2.3(1)                                                                         --------->ERF1                                                                        <---------RAP2.6(1)                                                                        <---------RAP2.3(1)                                                                        <---------DEAR3(2)                                                                        <---------ORA47(2)                                                                        <---------RRTF1(1)                                                                        <---------ERF1                                                                        ------>NtERF2   <-----------RAV1(2)                                                                        --------->LBD16--------->LBD16                                                                        <---------DEAR4(2)                                                                        <---------ATERF1(1)                                                                       <---------DEAR3(1)                                                                       --------->DEAR3(1)<---------TOE1(2)                                                                       <---------RAP2.3(3)                                                                       <---------ATERF1(2)                                                                       --------->ATERF1(2)                                                                       <---------RAP2.3(2)    -------                                                                      <---------LBD16 --------->DEAR3(1)                          --------->ZAT6 <---------LBD16              --------->ATERF1(1)<---------TOE2(2)                   --------->TOE1(2)    --------->MYB52(1)          ------->GAMYB<---------ATERF1(1)             <---------WOX13(1)  <----------DOF2                    --------->ANAC46------>NtERF2 -->GLK1(2)--------->ATHB12     --------->TOE2(3)                  --------->MYB46(3)<------NtERF2 --GLK1(2)<---------YAB1 --------->GLK1(1) --------->LBD16  --------->At4g35610<------NtERF2<--------P   tagggttttaagatgattgaacatgggaactctacctttgattaccggagtattagagaagtcgctgcaaacgccggcgccggagccaccgcaggttagt  8903800                                                                                               ------                                                                  <---------LBD16            <------NtERF2                                                             --------->ATHB12                --------                                     <---------At4g35610   <--------P                        --------                                     <---------ZAT2        <---------WOX13(1)                ------>NtERF2                                     --------->At4g35610  <-------GAMYB                     <--------                                   <--------P            <---------MYB46(3)                 ---------                                  <---------MYB52(1)     <------MYB46(1)       <-----------RAV1(2)<--                          <---------YAB1                 <------MYB83 <---------ARR14(2)  <---------LBD16    <-----------GT1    <----------DOF2                  --------->MYB59        <---------LBD16------- -->MYB52(2)      <-------TEIL <---------ANAC46         <---------AtMYB61<---------AHL20(2)<---------DEAR3(1)   ttcaattatctgttttcaagttcgtcttttgattcgggtagctgaatttttgttttgtttggttgatttggggattttttttcaggggctatcgcggcga  8903900                                                                        ---------->DOF2                                                                       <---------WRKY38(1) >NtERF2                                                               <---------WRKY45 ->ATERF1(1)                                            <---------At4g35610 ->RAP2.3(1)                            <-------TEIL ---------->DOF2   <---------WRKY12 <---------ANAC58 -ATERF1(1)<---------MYB52(1)          <---------ARR14(2)             --------->WRKY18(1) >LBD16---------->ID1                  --------->ARR14(2)   <---------ALFIN1<---------------AtSPL8 -- --------DOF2                         <---------GLK1(2) --------->At4g35610 --------------->AtSPL3 <- -->DEAR3(1)                 <---------TOE2(3)    ----------->RAV1(2)<-----------HVH21  <---------ANAC58   cttttgtttgtccattagatgtgatcaaaacaaggttacaggttcttggtctccctgaagctccagcctctggtcaaagaggtactacttgcttcaaact  8904000  Previous    Next  AGI:  At1g25375.1    Description:  metallo-beta-lactamase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO42171.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279) Range:  from: 8900140    to: 8903244    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g25380.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G47490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42182.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 8903457    to: 8905989    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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