Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ----------------->AGL3          ----------->GT1   <----------DOF2                                -------->P                     --------->YAB1    <-----------GT1             --------->ANAC46--------->At4g35610           <---------AHL20(2)    ---------->ID1 --------AHL20(2)           <-----------ARR10        ----------->GT1   --------->ICU4               - ------>AHL20(2)          <---------At4g35610 <-------TEIL--------->AHL20(2)    <-----------GT1 <<<<<   ttaaatatagtatacaagactcgaattcagcatctacccctatataggttcagaaatgtattaaatcatagtaaaaattgtttttccttttcaaattggt  8884700               <---------ARR11(3)               --------->ARR11(3)              <---------GLK1(1)                                                                  ----              --------->GLK1(1)          --------->YAB1                                  <---------ARR14(2)            --------->YAB1--------->ATHB12                                               --------->ARR14(2) -------->TOE2(3) <----------DOF2--------->MYB52(2)   <-------TEIL <-----------GT1  ----------->RAV1(1) <<<<MYB2  <---------ATHB12    <---------MYB52(1)  <---------ANAC55(2)             --------->REM1(1)   tttcttaaaaccaatgatatctttttcttcattgttagttctatgaaaaaactacgtacaagcgtagaattactgactagtctctacaacatatcgtccc  8884800                                                                                               <-----                                                                                           --------->YAB1                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                          <---------YAB1                       --------->AHL20(2)                                               <---------ICU4                       <---------AHL20(2)                                               --------->YAB1                  <---------AHL20(1)  --------->DAG2                                   <---------AHL20(2)          --------->AHL20(2)         ---------->DOF2              --------->YAB1       --------->ICU4         --------->AHL20(1)       --------->TOE1(3)             --------->ANAC58       --------->AHL20(2)         <---------AHL20(1)       --------->TOE2(3)             --------->ANAC58       <---------ATHB51        --------->AHL20(2) --------->YAB1----------->GT1      ---------->DOF2  --------->AHL20(2)---- ----->AtLEC2  ----------->GT1<-----------GT1        <---------YAB1  --------->AHL20(2)<---------ATHB12   tgcataacaaatatatatagtatatttatttataacccttaaagtgtaaataactattagagtggaaagcataaaatacaataaaacaaataattatata  8884900                                                                                         ---------->DOF2                                                                                      ----------->TBP                                                                                    <---------------AGL15                                                                                   ------>ZmHOX2a(2)                                                                                   ----------------->AGL2                                                                                   ----------------->AGL3                                                                                   <-----------------AGL3                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(3)                                                                               <---------YAB1   -----                       <-----------GT1                                       --------->YAB1   <------             --------->TOE2(3)                     --------->TOE2(3)         <---------ICU4   <------           <---------TOE2(3)                       <----------DOF2          --------->ICU4   -------- ----AHL20(2)--------->YAB1           --------->CCA1(2)                   --------->YAB1<---------AHL20(2) ------>DOF2----------->GT1         --------->AHL20(2)            <---------MYB46(3)--------------->AGL15   aaagaaatgatataatgttaattttaaacaattccaaaatatatgcgtcaatactttaaaatttctagtggttgaataatcatgatctatataaagaaag  8885000  ------->TEIL--------->ARR11(3)          <------------CBF              ============================= ---->TOE1(2) <---------ARR11(3)        --------->MYB46(3)            <---------YAB1                - ---------AtSPL3           --------->AHL20(2)                       --------->YAB1              <---- ---------AtSPL8<-----------GT1    --------->AtLEC2  <----------DOF2*TSS---------->DOF2       <------ -->DOF2 ------------>CBF ----------->TBP--------->ATHB12          <---------ATHB12       -----------   tacgaacattatccaatatcacgagtctataaattccatacaaccattgaattcactttcacttcccaaatcataaaagcctctctcttagtctattttt  8885100   =================================================bZIP_DOF                ---------->DOF2   --------->O2                                                          --------->YAB1   --------->ANAC58                                                  <---------YAB1   --------->ANAC46                                                --------->YAB1   --------->TGA1a                                                 <-----------GT1   --------->ANAC58                                            --------->AHL20(2)  <---------LBD16           --------->ANAC46                   <---------AHL20(2) --------->MYB52(1)         --------->ANAC58                   <---------YAB1 ============bZIP_DOF  <---------REM1(2)                      <---------AHL20(2) ---------->HVH21      --------->ZAT14                     --------->AHL20(1)                   <---- -------GT1            <---------ZAT14    --------->DAG2   --------->AHL20(2)                  <----- ---AHL20(2)     <---------ALFIN1        ---------->DOF2   <---------AHL20(1)             <---------AHL20(2) ------------>TaNAC69(2)    --------->ANAC58 ----------->GT1  --------->AHL20(2)        --------->AHL20(2)   atctcacggctctctctcccctctctacacacacaaacacaaataaagcgtaaaactgaaatattttaattacaattagaaagagaacatattaatatgt  8885200                                                 <------ZmHOX2a(1)                                              --------->At4g35610                                           --------->ZAT14                                           <---------ZAT14                                      <-------TEIL---------->DOF2                                   -                                      <---------At4g35610                                           -                                      --------->ZAT18                                               -                                      <---------ZAT14                                               <       ---------->DOF2                --------->ZAT14                                              -- --------->YAB1                       --------->At4g35610              <------ZmHOX2a(1)           <- -----------------WRI1               --------->ALFIN1         <---------ZAT18               --------- ------HVH21                      <---------------AtSPL8 <---------ANAC46                --------->WOX13(1)   caaatataacaaagaagaagtgtaatggaaatgaagagggtgcagagcagaggaaagggccttggacactcgaggaagacactcttctcaccaattacat  8885300                                    --------->ARR11(3)        --------->At5g28300         <---------ARR11(3)    --------->MYB52(1)        --------->ANAC58   ----------->HVH21          --------->ANAC58 ---------------->AGL1     --------->ZAT2 ---------------->AG       --------->At4g35610 -------------->AGL15   <---------At4g35610 ---------------AGL15  --------->ARR14(2)            <----------DOF2               ----------->RAV1(1) --------------->AGL1  <---------ARR14(2)  ----------->GT1<----------DOF2 <-----------GT1 ----------------AGL1  --------->GLK1(2)  --------->HSFB2a(2)          --------------->AtSPL8 >AHL20(2)            <---------GLK1(2)   <---------HSFB2a(2)         --------------------->WRI1 ----   ttcccataacggtgaaggccgatggaatctgctcgctaaatcttctggtaatattcttttcttttatgttttctttgtactattccaacaaaatgcaatt  8885400                  --------->bZIP60(2)            <----------DOF2                                 <---                <---------ALFIN1              ------>ZmHOX2a(2)                             ---------      <---------ARR11(3)                    --------->ARR11(3)                           <------ZmHOX2a(1)      --------->ARR11(3)            ---------->DOF2         <----------ID1             ----------->GT1 ------->GT1 ------>ZmHOX2a(1)     <---------AHL20(2)<-----------GT1          ---------->DOF2--------   ggtgaaaatgtcttcctcccacttcatatttttgtattaaaagtttgatctctttttacaaaaaaacaaaaaaacagggctaaagagagcaggaaaaagt  8885500                                                                                                -----                                              --------->GLK1(2)                          ------------                                         --------->ALFIN1                                <-----------                                    --------->DAG2                                       <---------YAB1                     --------->TOE2(3) <---------ANAC58                                 <------------                     --------->TOE1(3) <---------ANAC58                                 =============           <-------GAMYB---------->DOF2<---------ANAC46                                 -------------          <---------MYB46(3)  ----------->RAV1(1)                                       ------------- ------REM1(1)    <-----------GT1  ---------->DOF2      ------>ZmHOX2a(1)       <---------At4g35610 ->DOF2   ----------->GT1    <---------ETT(1)<---------GLK1(2)                  --------->At4g35610 ->DAG2  <---------AtMYB61   --------->ANAC46<---------GLK1(1)     <----------DOF2      <------------   tgtagattgagatggttgaattaccttaaacccgacataaagcgtgggaatctcactcctcaagaacaacttttaatccttgagctccattctaaatggg  8885600  Previous    Next  AGI:  At1g25340.1    Description:  MYB116 (myb domain protein 116); DNA binding / transcription factor. similar to MYB62 (myb domain protein 62), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G68320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68074.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 8885068    to: 8886385    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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