Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->YAB1                                      <---------YAB1                      <---------MYB52(1)                                     --------->AHL20(2)                   <--------P                                    --------->YAB1                       <-------GAMYB                                    <---------ICU4                      <---------MYB46(3)                  <-------TEIL     --------->ICU4                       <---------DEAR3(2)         --------->YAB1       ----------->GT1                           <------MYB83       <---------        <---------YAB1        <------MYB46(1)                           <------MYB46(1)   ===========      --------->YAB1          <------MYB83--------->YAB1 <---------AHL20(2) --------->MYB52(2)     <---------YAB1          --------->MYB46(2) <---------AHL20(2)     <---------DEAR3(1) <----------   --------->YAB1<-----------GT1   <---------YAB1     ----------->GT1------------>AtMYB77 ----------- ------>GT1<---------YAB1    --------->MYB59   --------->AHL20(2)---------->DOF2  ---------->ID1   gtaaatgataatcataaatatacatttttgtttggtaattataatcatattaaatatagttaattgttaaaggtcggttagtttgtctcattccttttga  8877400                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                    <---------TOE2(3)         -------                                                                   ---------->DOF2            <------                                                           --------->AHL20(2)                <------- <---------YAB1                                          --------------->AGL15               -------- -DOF2                              --------->YAB1       <----------DOF2                   --------->YAB1 ========================================================================MADS_MADS        <---------YAB1 -----AGL15                    <----------ID1        <---------GLK1(2)                  ----------->GT1 ---->AGL15      <---------YAB1----------->GT1--------->AHL20(2) <---------YAB1         --------->YAB1   agtatgaaaatcacaaattttcattaagagaaaacgaaaaataacaaataaaacagcttcttttaatattaaagtttttttcttgaaaaattgtaataat  8877500      --------->At4g35610      <---------At4g35610    --------->ZAT18 ----->YAB1                                     --------->YAB1 ------AHL20(2)                                <---------YAB1 ----->AHL20(2)                             <---------MYB52(1)            --------->LBD16 -->YAB1                           --------->ZAT18           <---------AtLEC2       --------->GLK1(2) ---ICU4            <---------AHL20(2) <----------DOF2      <-------TEIL --------->ANAC46 --YAB1           <---------AHL20(2) <----------DOF2   ---------->DOF2  <---------LBD16 ->ICU4   ---------->DOF2          <---------ZAT18 ---------->DOF2------->TEIL <---------ARR11(3)   aatatgtgagctaaaagtatataaaaattggcataagtgctctttcgttatgataaagaaagtgcatgaatttctccgcaagagctaatcttttgcacat  8877600                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                               <---------ATHB12       <---------ICU4                                                          --------->AHL20(2)      <---------YAB1                                                        --------------->AGL15    --------->YAB1                                                       <-----------GT1    <---------ICU4                                                  <---------AHL20(2)   <---------YAB1                <---------ICU4                     <---------YAB1   --------->ICU4               <---------ATHB12                   <---------AHL20(2) --------->YAB1           <-----------GT1    <---------ANAC55(2)   --------->AHL20(2)            ----   ttgtcatcatcattctcaagttttgtattttcccatcattctatatcacttaaactattcaacattgattttaattcaccaataaatgaaaacagaaatt  8877700                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                  --------->AHL20(2)                                                               --                  <---------AHL20(2)                                                               --                  <---------AHL20(1)                  <---------AHL20(2)                           <-                  --------->AHL20(1)                <-----------TBP                               <--                 --------->AHL20(2)               <---------RVE1(1)                               <--       --------->AHL20(2)                --------->DAG2                                           <--      --------->YAB1                    ---------->DOF2                                   <------ZmHOX2a(1)     --------->AHL20(2)    <---------ARR11(3)     <---------CCA1(1)              ----------------->AGL1 --------->AHL20(2)        --------->ARR11(3)    --------->ARR11(3)              <-----------------AGL1 ------->GT1   --------->YAB1------>ZmHOX2a(2)   <---------ARR11(3) ---------->DOF2     <---------TOE2(3)   tgtataaataaaaatactaataaattgttgatctcaaaaaaaaaaagttgggatatttatagatagataccaaagtccaaaggtccaacttaggaagccc  8877800 -------->HSFB2a(1) -------->HSFC1(2) ---------HSFB2a(1) ---------HSFC1(2) ----->TEIL ----------ARR10 --------ARR11(1) ------->GLK1(2) ------->ARR14(2) --------ARR14(2)                   <----------DOF2                                 --------->LBD16 -------CCA1(2)            <---------DAG2                                          --------->ANAC46 -------GLK1(2)            <----------DOF2         --------->ZAT14                <---------LBD16 <-- -------ARR14(1)          <---------DAG2    *TSS   <---------ZAT14           --------->WOX13(1)<-----   gaatcttctatcaacgtctctcacagtcccttttcatgctttcacactctcactgctcttctctctccaattctctcatcaatctccgcaaactcttctc  8877900                                                                                       <----------DOF2                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)                                                                                  <---------ARR11(3)                                                                             <-------GAMYB                                                                            <---------DEAR3(2)                                                                            <---------MYB46(3)                                                                           <---------DEAR3(1)                                                                           <---------DREB2C(2)                                                                           <---------DEAR4(1)                                                                           <---------At1g77200                                                                          --------->DDF1      <---------ARR11(3)                        <---------DAG2           <-----------HVH21      --------->ARR11(3)                        <----------DOF2  ==========================HOX2a_HOX2a     <---------GLK1(1)  --------->ZAT14    <---------At4g35610   =========================HOX2a_HOX2a -------YAB1        --------->DAG2     --------->GLK1(2)         ------>ZmHOX2a(1)--------->ARR11(3) ----YAB1          ---------->DOF2    <---------GLK1(2)   --------->ICU4<-----------RAV1(1)   attcttgatatctccattaccaaaagtaaactcttgtccaaattctgctacttttttgtactgattcctccgaaatgtcggtgggatctcttttattcat  8878000                                                                                                 <---                                                                                                 ----                                                                                            <--------                                                                                            <--------                                                                                          <------ZmHOX2a(2)                                                                                          --------->CCA1(2)                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)             --------->ARR14(2)                                                          --------->AGP1          --------->HSFB2a(2)                                    --------->ZAT6          --------->ARR14(2)          <---------HSFB2a(2)                                  <-----------GT1           <---------ARR14(2)         <---------LBD16<---------ANAC46  <----------ID1   <----------DOF2           ---------->DOF2   gtttcttcttatctggaacttcaatggcgaattgaatgctctaaacgacgaagggtttgctcttttaactctgaagcagtctatttcaaaagatccagat  8878100                                                               --------->YAB1                                                              --------->ICU4      --------->ANAC58                                        <---------YAB1      --------->ANAC58                                    <---------------------WRI1      --------->ANAC46                                 --------->O2        <-------GAMYB  <----------DOF2                                      ============================MYC_MYB ------HSFC1(2)                                        <---------O2       --------->MYB111(2) ----->HSFC1(2)            --------->YAB1              --------->TGA1a    <---------MYB46(3)   ------ -HSFB2a(2)              --------->GLK1(2)             ============================================== ---RAV1(2)     <---------GLK1(1)                      <---------TGA1a<---------TOE2(3)      <-------   ggttctttaagcaattggaactcagagaatcaaaacccttgttcttggaatggagtcacttgtgatgataacaaggttgttgtctctcttagcatcccaa  8878200          --------->MYB59          <---------TOE1(3)      <----------DOF2 ---->DOF2<---------TOE2(3)                         <---------MYB52(1)      --------->At4g35610 =====bZIP_DOF --------->ARR11(3)                  <-----------HVH21--------->ANAC58       -------->P --------AGL15 <---------ARR11(3)                 --------->ANAC46  --------->ANAC58      <----------   agaagaaacttttaggttatcttccttcttctcttggtttactctctaatctccgtcatttgaatttgagaagcaatgagcttagtgggaacttacctgt  8878300  Previous    Next  AGI:  At1g25320.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G01210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73490.1); similar to hypothetical protein OsI_002131 [Oryza sativa (indica cultivar-group)] (GB:EAY74284.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42197.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leu Range:  from: 8877844    to: 8880297    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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