AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                  <---------ANAC46
                                  <---------ANAC58
                   --------->ANAC58
                   --------->ANAC58
                   --------->ANAC46<-------GAMYB
                 <---------DOF5.7(2)
        <---------ZAT14        <---------DEAR3(1)            ----------->GT1
        <---------ZAT18    <---------TOE2(3)                 --------->LBD16
     <---------ANAC58   <---------ATHB12                    --------->ANAC58
     <---------ANAC46  --------->ANAC58                     --------->ANAC46
     <---------ANAC58 --------->WOX13(1)        ----------->GT1           --------->TOE2(3)      ---
---NtERF2        ---------->DOF2  <---------ANAC58          --------->ANAC58        <---------MYB52(2)
>ANAC46 --------->ZAT14--------->ANAC58 <---------GLK1(1)  <---------LBD16--------->TOE1(3)      ---
 
caagttgttcgtgtactcgataacgcaatcaaggatggcgttgatatcagactgtaagattatacggaaaaaaaaaacattaacaaaactaacatttccc  8874400
                                                 <---------ANAC46
                                                 <------MYB46(1)
                                                 <------MYB83
                                                 <---------ANAC58
                                                 <---------ANAC58
                                                <---------MYB46(3)
                                                --------->MYB55(2)
                                             --------->ZAT2
                                             <-------GAMYB
                                             --------->At4g35610
                                             <---------ZAT2 --------->TOE1(3)
                                             <---------At4g35610                                   <
                                            --------->MYB55(2)                                  <---
                                            <---------MYB46(3)                                 -----
    --------->AHL20(2)                   ------------>AtMYB77------>ZmHOX2a(1)               <------
------>ANAC58                          --------->ALFIN1     --------->TOE2(3) <---------ANAC58 -----
------>ANAC58    ---------->DOF2  ------->TEIL<---------MYB52(1)              <---------ANAC58------
 
aagaaaaaaaaatcagttaacaaaggaagcagttgtgaacctgtgggcagttgggtgtaatttccttaagtgtttctagttgccttcttatacgttcccg  8874500
                                                            ------->TEIL              <-----------GT1
                                                  <---------HSFB2a(2)              <---------MYB46(3)
<---------ARR14(2)                                --------->HSFB2a(2)          --------->ATHB51
--------->ARR14(2)                               <---------LBD16               --------->ATHB12
---------MYB52(1)                             <---------ANAC58                 -------->ATHB1
---NtERF2                                     <---------ANAC58             <-----------------AGL2
---->LBD16      ---------->DOF2     <---------ATHB12     <---------ANAC55(2)  <---------YAB1
---LBD16<---------TOE2(3)         --------->WOX13(1)     --------->ANAC55(2)<---------------AGL15
->NtERF2<---------TOE1(3) ---------->DOF2   --------->GLK1(2)<---------YAB1<-----------------AGL3
--->ANAC46 --------->GLK1(1)  ----------->GT1 <---------ANAC46--------->YAB1--------------->AGL15
 
ccgtttcttctaaggtatccaaagaagagaaaagagtaaatcaagagtttcttggggaagacgtatcataacaatacaactattattggttaccttcttc  8874600
                                    <---------ANAC55(2)                              ----------->HVH21
                                    --------->ANAC55(2)                              --------->WRKY12
               <---------ARR14(2)   --------->ANAC46                               ----------->RAV1(2)
               --------->ARR14(2)   --------->ANAC58                               <---------ZAT2
               <---------GLK1(2)    --------->ANAC58                               <---------At4g35610
             ----------->ARR10<---------AHL20(2)                                   --------->At4g35610
        --------->ICU4       --------->AHL20(2)                                    --------->ZAT2---
        <---------YAB1     <---------ARR11(3)                              ------>ZmHOX2a(1)<-------
      --------->YAB1       --------->ARR11(3)                 <----------DOF2    <-----------RAV1(2)
 
aacaaggtatcatgatcagatttgtctgaagatttaatcacgcactgtgtcttaactcgcttcttctttccttctctcctcgactcagctgacctctttt  8874700
                                             --------->ARR14(2)
                                      --------->ANAC58
                                      --------->ANAC46
                                      --------->ANAC58
                                  --------->ANAC46
               <----------DOF2    --------->ANAC58
               <---------DAG2   ------>ZmHOX2a(1)
              <---------DAG2   --------->TOE2(2)
           <---------ALFIN1    --------->TOE1(2)
   <----------DOF2       ----------------------->TaNAC69(2)
<---------ALFIN1       <---------MYB46(3)<-----------GT1                             --------->ATHB12
------------>AtSPL3  <-------GAMYB--------->ANAC58                     --------->ZAT14
---DOF2    --------->REM1(1)  ------>ZmHOX2a(2)                        <---------ZAT14
 
gccctactttctctacacctttttcgttgttgatcctacgcaagtcactattcgcctctggattagtgagcgagtatagtatctcaaaccattgccgaag  8874800
                                               --------->YAB1                 <---------ARR14(2)
                      <---------YAB1          <---------ZAT6            <---------TOE2(3)
                   <----------DOF2       <----------DOF2      --------------------->WRI1
         ------>ZmHOX2a(1)       --------->ANAC55(2)     <---------At4g35610  --------->ARR14(2)
 
aaatacttcgtccttgttcattcttttgatagttttaagtgattctttactgataagtttggctgatttgagtttaacgcagacatgcttcaagggtact  8874900
                                                                --------->DAG2
                                                               ---------->DOF2
            <------ZmHOX2a(1)    ----------->TGA1        --------->At4g35610          <-----------GT1
           ----------->GT1       ----------->HVH21       <---------At4g35610<-----------TGA1     <--
        ---------->DOF2        <---------ICU4            ------>NtERF2      <-----------HVH21    ---
   ----------->GT1             --------->YAB1          <---------RAP2.6(2) --------->ANAC46    <----
 
tatacagggagaaaaggatatatatgtaaactactcatgacgagaaacaacaacgtttgccgctcaaaaagctactcttcgtcactaagttactaattct  8875000
                                                             <---------O2
                                                             <---------bZIP60(2)
                                                             --------->TGA1a
                                                             <---------TGA1a
                                                             <---------ANAC55(1)
   --------->AHL20(2)                                        <---------ANAC58
   <---------AHL20(2)                                        <---------ANAC58
  <---------AHL20(2)                                         --------->O2
  <---------AHL20(1)            <---------TOE1(3)            <---------ANAC55(2)
  --------->AHL20(2)            <---------TOE2(3)          <-----------GT1
  --------->AHL20(1)  --------->ALFIN1     --------->CCA1(2) <---------ANAC46
-------AHL20(2)     <---------ANAC46      --------->ARR11(3) --------->ANAC55(2)       ----------->GT1
------>AHL20(2)    --------->DAG2   <-------TEIL   --------->ANAC58              --------->ZAT6-----
------DOF2    <---------TOE2(3) <---------TOE1(2)  --------->ANAC58          <---------MYB59   <----
 
ttaaataaaattacatttatgtaaggtggacatctaaggttcatagatatagccaagaaatgtaacgtgtccatttttgacctaagtctacggtttaaaa  8875100
                                                                --------->O2
                                                                <---------O2
                                     --------->ANAC58           <---------bZIP60(2)               <-
     --------->GLK1(2)               --------->ANAC46           <---------TGA1a                   --
    <---------GLK1(2)         --------->YAB1          --------->MYB52(1)                          --
    --------->ARR11(3)        --------->ANAC55(1)<------ZmHOX2a(1)                                <-
    <---------ARR11(3)        --------->ANAC46 --------->MYB59  --------->TGA1a                <----
---->AHL20(2)      <---------ARR11(3)<----------ID1 <---------DAG2                         ---------
-----AHL20(2)     <------ZmHOX2a(1)  --------->ANAC58<---------SPL7              --------->DOF5.7(2)
 
aattagagattttggaatgcaggatatatacacacataatacgacaatattaggaccttacgaagtcacgaggctcttgtaatcgtttactcagaactcc  8875200
                                                             ------>ZmHOX2a(2)
                       <---------TOE1(2)            <---------HSFB2a(2)
                       ------->TEIL                 --------->HSFC1(1)
                     <---------SPL7                 --------->HSFB2a(2)
       <------ZmHOX2a(1) --------->TOE2(3)    <---------AHL20(1)
<-------TEIL        --------->TOE1(1)         --------->AHL20(1)
------MYC3          --------->TOE2(1)         --------->ARR11(3)
----->MYC3         --------------->AtSPL8     <---------ARR11(3)  --------->AHL20(2)
----->MYC2        <-----------HVH21          <---------AHL20(2)   <---------AHL20(2)<-----------GT1
------MYC2       --------->ANAC46        <---------AHL20(2)--------->ARR11(3)--------->bZIP60(1)
-----ALFIN1--------->ZAT18           --------->AHL20(2) <---------KAN4(2)    <---------bZIP60(1)   <
>GLK1(1)   <---------ZAT14<----------DOF2--------->AHL20(2)<---------ARR11(3)<---------REM1(1) <----
 
acatgcattaggagtactctacgtcgtacctttaatacaaatatttaaatattttcgagaatgatctaattaatctagtgatgtaagttacaatatttct  8875300
<- Previous    Next ->

AGI:  At1g25310.1   
Description:  MEE8 (maternal effect embryo arrest 8); DNA binding / transcription factor. contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092)
Range:  from: 8874111    to: 8874821    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version