Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <----------DOF2 ------->AtMYB61     --------->AtLEC2         <----------DOF2                            ---------->ID1 ------>MYB46(3)   --------->YAB1 ---------->ID1  <-----------GT1               --------->YAB1 -------GT1   <---------YAB1      <---------CCA1(2)<<<<<<<<<GATA-1             <---------ATHB12   accactcgtctccttgatcattcatgctaatcccttgtctctctctctcttttatctatgcttttggttttttttaggcaaatcaaaatttgtctcaata  8866700                  <-----------HVH21           <---------ZAT6         --------->ZAT14         <---------ZAT14       --------->ZAT14             <-----------GT1       <---------ZAT14  <---------TGA1a       <---------SPL7   --------->TGA1a      ============================bZIP_DOF                             <---------AHL20(2)      <----------DOF2   --------->O2                      <---------ATHB12         <----------DOF2 <---------At4g35610    <---------O2      ------>ZmHOX2a(1)           --------->AHL20(2)   ctcagttgctgtactgtgagagtcagacgtctactattaacatcctcttctctattctaaatcaattgaacatttaataggtagtctttaactaatctta  8866800                                                                 <---------ATHB12          --------->ARR14(2)                                                            --------->ANAC58        <---------O2                                                            --------->ANAC46        <---------TGA1a                                                    ==========================================bZIP_DOF                                                    ---------->DOF2 <---------ANAC55(2)    <---------ARR14(2)                                                  --------->ANAC58<---------ICU4 --------->ANAC46<---    <------------MYB.PH3(2)                       --------->ANAC58--------->YAB1 ----------->HVH21  <-----------GT1<---------GLK1(1)     <---------YAB1       --------->ANAC58     <---------ETT(1)----   catgttactaacttctaagaaatcacattgaacaacaatgtatgatggaaacaagaaagaacacacaatcatgtgtctgaaacccgacatggggttcttc  8866900                             <-----------------AGL1                   <---------TOE2(3)--------->ANAC58                   <---------YAB1   --------->ANAC58           <---------------AtSPL8   --------->ANAC46                               <------ZmHOX2a(1)           --------------->AtSPL8  --------->RAP2.6(3)      <---------------------WRI1 ------HSFB2a(2) <---------------AGL15                   <-------TEIL          <------ZmHOX2a(1) ----->HSFB2a(2)<-----------------AGL1          ----------->GT1        ---------->DOF2   ttgaagtctcaatcttgtactaacattggcaaaccaatacggcaatacaatggaaaaaattcatagaaatgaacaaagagaggaaggatttaagctcgag  8867000                                                                                               *TSS--                                                                                               ------                                                                                          ------>ZmHOX2a(2)              --------->LBD16                                                           <---------ARR11(3)    ----------->GT1                             ---------->DOF2              ----------->GT1------>ZmHOX2a(1)   --------->DAG2                         <---------ANAC46    --------->AHL20(2)        --------->ARR11(3)  ---------->DOF2                  --------->AHL20(2)    <------ZmHOX2a(1)  ----------->GT1--------->TOE2(3)   tctgaaaagtaaaatccccaaacaaaacacattcaaactaaatagtgtgttaaagagtaggacataaaatgtaagagaagggtaaaaaatgatcctaaaa  8867100                                                                                                   <-                                                                                               <-----                                                                                               ------                                                                                          <---------AGP1                                                                                          <---------ARR11(3)                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    --------->GLK1(2)                                                                                   --------->ARR14(2)                                                                   <---------GLK1(2)<---------ARR14(2)                                                                   <---------ICU4  <---------GLK1(2)                                                                <---------ICU4     <---------ARR14(2)          <---------MYB46(3)                                    --------->YAB1   --------->LBD16  <--        <---------MYB52(1)                                     <---------YAB1  <---------LBD16<------     <-------TEIL               <---------ANAC46         <---------ARR11(3)    <------NtERF2------>ZmHOX2a(2) -------->DOF2             <---------ANAC55(2)          <---------ICU4        ------>NtERF2<---------GLK1(1) --->YAB1 <-----------RAV1(1)----------->HVH21         --------->ICU4         --------->MYB52(1)  <--   taaaaggtccatttgttgggaaattagaaacgtgaaggggaagatggtatcagtgtcattatctcatcataatctctggccaccggaatctggatctacg  8867200                                --------->ANAC58                                --------->ANAC58                                --------->ANAC46                             <---------REM1(2)                             --------->ARR14(2)                             --------->SPL7                             <---------ARR14(2)                             --------->ZAT14                          <---------ANAC58                         --------------->AtSPL3                       ------------------>SPL14                     ------>NtERF2                     --------->At4g35610                     <---------ATERF1(1)                     ------>NtERF2                     <---------At4g35610                    <---------ALFIN1                    --------->RAP2.3(2)                     --------->DEAR3(1)                 --------->DEAR3(1)                      --------->AtMYB61                 ------->GAMYB<---------ALFIN1           --------->DEAR3(1)                 --------->ANAC46                       <---------At4g35610                <---------MYB55(2)                      --------->At4g35610                --------->MYB46(3)                    <---------ALFIN1        <---------ARR14(2)<---------ANAC58          <---------RAP2.6(3)        --------->ARR14(2)<---------ANAC46          <-----------HVH21   <---------ANAC58 --------->DEAR3(1)              <---------ATERF1(1)   <---------ANAC58--------->RAP2.3(1)              <-----------TGA1   <---------ANAC46--------->DEAR4(2)              --------->ANAC46 ---------DOF2  <------------AtMYB77               --------->RAP2.6(2) ----DEAR3(1)   --------->ATERF1(1)              --------->At4g35610                               <- --->ANAC46--------->ANAC58<---------SPL7        <---------At4g35610                               <- -------ANAC58  --------->DEAR3(2)      ------>NtERF2<------NtERF2  <---------GLK1(1)          <----- ---LBD16  --------->ANAC58--------->LBD16   <-----------HVH21      --------->GLK1(1)      <---------TOE1(3) -------ANAC58 <---------ATERF1(1)----------->RAV1(2)<---------MYB52(1)                    <---------TOE2(3)   gcgtttcgtggtttcgcaaccgccgcttccgtacacgcctgccaccatgttagccgtcacctccgccttgatttccatcttcgctcttcccttaaggttc  8867300                                             --------->TOE1(3)           <---------GLK1(1)                                      --------->YAB1                <---------At4g35610                                ------>ZmHOX2a(1)           <-----------RAV1(2) ------>MYB83                   <---------HSFB2a(2)        <---------MYB52(1) ------>MYB46(1)                --------->LBD16           <-----------HVH21                       >>> --------MYB46(2)               --------->HSFB2a(2)   <---------ANAC58   --------->GLK1(1)  <-------- --------MYB111(1)       <---------YAB1  ---------->DOF2  <-----------TGA1  <---------LBD16 --------- --TEIL      <---------TOE1(2) <---------LBD16        <---------ANAC58<---------YAB1        <--------   acctactcatcttcgctcgtttgtagtataattcctggaatcacaaagcttaaattgcttcgtcaggcgcttctgatttctgggttaatctcattttatt  8867400                                                                           <---------ARR14(2)                                                                    ---------->DOF2         <---------At4g35610                                    --------->CCA1(2) >>>>>>>WRKY63            ----------->RAV1(1)                --------->ANAC58 -AHL20(2)              --------->ZAT14         --------->YAB1 <---------ARR11(3) >AHL20(2)          --------->ARR14(2)         --------->ICU4--------->ANAC58 -AHL20(1)         <---------GLK1(2) <---------At4g35610   <---------AtLEC2--------->ARR14(2)   tgactatgctctgcttctacagaaactgcagcatttttctgatgatgcaagaatgaagtttgcaagataccaaagagtatttgtattcaatggggctaat  8867500                                 <---------ATHB12                                <---------ARR14(2)                                --------->ARR14(2)                                <-----------ARR10                       <-------GAMYB                       <---------MYB52(1)                                                       <----                      --------->LBD16                                                       <--------                    <---------LBD16                           <---------ANAC46            <---------MYB46(3)                  <---------ARR14(2)                       <-----------RAV1(1)           <---------DEAR3(1)                  --------->ARR14(2)                    <---------AHL20(2)               <---------AtMYB61                 <---------GLK1(1)   --------->ANAC46 <----------DOF2                    --------->ALFIN1                 --------->GLK1(1) ----------------------->TaNAC69(2)              <---------STY1(1)<           <---------ZAT6<---------MYB46(3)           --------->TOE2(3)       <-----------GT1   =====   tttctcaagtctagagttgatatccggttgtcccaatcttcgccatttgtatgtttctttaatggtggagagagtagattaaaccctagaggtggtgagg  8867600  Previous    Next  AGI:  At1g25280.1    Description:  AtTLP10 (TUBBY LIKE PROTEIN 10); phosphoric diester hydrolase/ transcription factor. Identical to Tubby-like F-box protein 10 (TULP10) [Arabidopsis Thaliana] (GB:Q9FRH7;GB:Q84JM8;GB:Q84UG2;GB:Q84UG3;GB:Q8H0W5); similar to AtTLP1 (TUBBY LIKE PROTEIN 1), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G76900.1); similar to AtTLP1 (TUBBY LIKE PROTEIN 1), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G76900.2); similar to unknown protein [Arabidopsis lyrata] (GB:AAN46234.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007); contains InterPro domain Cyclin-like Range:  from: 8863764    to: 8866792    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g25290.1    Description:  rhomboid family protein. similar to rhomboid family protein [Arabidopsis thaliana] (TAIR:AT1G52580.1); similar to unknown [Populus trichocarpa] (GB:ABK93694.1); contains InterPro domain Peptidase S54, rhomboid; (InterPro:IPR002610) Range:  from: 8867095    to: 8869079    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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