Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->At4g35610                                                                           <---------At4g35610                              ------>ZmHOX2a(1)                           ----------->RAV1(1)                          --------->ANAC46                              --------->ZAT14 ----->GAMYB   --------->AtLEC2                                         <---------ZAT14 ------>MYB46(3)       --------->ZAT14           <<<<<<<<<TBF1    <-----------HVH21 ------At4g35610 --------->YAB1             <----------DOF2    ---------->DOF2      --------->YAB1 <-   acagcctccctaattccattcacaatacactccttatgctctcttcctttcttcttcgtcttagacaaagtcactgcagcaaaaaatcagaaaacaaaac  8855500                             --------->TOE2(3)                   <---------ATHB12      --------->YAB1                           ---------->DOF2                   <---------------------WRI1                         <---------TOE2(3)             --------->YAB1  --------->YAB1                           <---------TOE1(3)     ------>ZmHOX2a(1)      <-----------GT1       --------->MYB46(3)  <---------ICU4       <---------DOF5.7(2)<---------ARR14(2) --------MYB52(1)--------->WOX13(1)     <---------YAB1               ---------->DOF2    --------->ARR14(2)   ccttagataaaccattcatcaatcgattcaaccatagaagctatgaaaaaacattactaactccaacaagttaaagtttttttcaaaagggttcctctaa  8855600                                    ---------->DOF2                              <------NtERF2                              --------->At4g35610                              --------->ATERF1(1)                             <---------ERF1                             <---------DEAR3(2)                             <---------ATERF1(1)                             <---------MYB46(3)                             <---------RAP2.3(1)                            <---------RAP2.3(2)                            <---------DEAR3(1)                           <------NtERF2                           --------->ATERF1(1)                          <---------RRTF1(1)                          <---------ATERF1(1)                          ------>NtERF2                          <---------ERF1                          <---------RAP2.3(1)                         <---------RAP2.3(2)                         <---------RAP2.3(3)                         <---------RRTF1(2)                         <---------RRTF1(3)                         <---------RAP2.6(2)                         --------->ATERF1(2)                         <---------DEAR3(1)              ---------->DOF2------>NtERF2           --------->TOE2(3)<---------ANAC46      --------->HSFB2a(2)           --------->TOE1(3)<---------RAP2.6(2)   <---------HSFB2a(2)    >>>>>>>>>MYB98       <---------ATERF1(2)     ----------------->AGL1   --------->MYB52(1)   --------->RAP2.6(3)  --------->At4g35610          <---------MYB46(3)      ---   ------>MYB83        <---------WRKY18(1)   <---------At4g35610     <-------TEIL              ------   ------>MYB46(1)    ----------->HVH21   <---------At5g28300       --------->CCA1(2)      --------->At4g35610 <---------MYB59      --------->WRKY12   <-----------GT1   ----------->HVH21               <---------At4g35610   aaacctaacaaaaccctaaaacccttgacggcggctacaaaagttacagcttccaaaaccagtgacagagatacaatggttcagacaatagagagcagaa  8855700                                                       <---------TOE1(3)                          <--                                                       <---------TOE2(3)                          <--                                                   <---------At4g35610                   ---------->DOF2                                                   <---------ZAT2                      --------->ANAC58 ------>DAG2                        <----------DOF2--------->At4g35610<---------AtLEC2 --------->ANAC58 ---->DOF2           ----------->RAV1(2)           --------->ZAT2<-----------RAV1(1)<------ZmHOX2a(1)   agagtgaaggaagaagagttctaacctggtctatctcgctttgatttaggcatagctgaggtttcaaatgttgtatggaagtgagaggaacgaaagtgaa  8855800  --------->RAP2.6(3)                                                              <----------DOF2 --------->MYB52(1)                                                    <----------DOF2 <---------AHL20(2) ----ZmHOX2a(1)          <----------DOF2                   *TSS<---------MYB52(1)  <---------DAG2 -------------AtSPL3<---------At4g35610 --------->LBD16   ---------->ID1         <---------TOE1(2)   ggagaacggcttctgtttattaagctcctttcaattttcttcagggaaactgaaacccttgttcccttgtttgctttaattcgcactttttaatctggac  8855900                       ------>NtERF2                    <---------LBD16                    ------>ZmHOX2a(2)                    --------->ATERF1(1)                   <------ZmHOX2a(2)                  --------->ARR14(2)                                                 <---------ZAT18                --------->LBD16                                                      <---------ZAT14              ------>ZmHOX2a(2)                                                      --------->ZAT18              <---------LBD16<-----------HVH21     --------->GLK1(1)                 --------->ZAT14             <------ZmHOX2a(2)                     <---------GLK1(1)              <---------ANAC46  -            --------->ARR14(2)                 --------->YAB1             --------->ATHB12          <            <---------ARR14(2)            <---------At4g35610    <---------AHL20(2)--------------->AtSPL8       -------->P <---------ARR14(2) <----------DOF2--------->GLK1(2)    <---------YAB1       -------   ccctaattcaacccgatccggatccggcccgtttcaggccttttagctatcagaaatctgggccgatttttttttgtcattggagggtgtactagtttaa  8856000                                                                                              -------                                                                                              -------                                                                                              <------                                                                                          --------->ICU4                                                                                 <---------TOE2(3)                                                                               <---------AHL20(2)                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                                                   <---------TOE2(3)     <---------AHL20(2)                                                                  ---------->DOF2<---------TOE1(3)<--                                                                 <---------AHL20(2)     --------->YAB1 -------->AHL20(2)                                               --------->AHL20(2)    <---------YAB1 ---------AHL20(2)                          ---------->DOF2<---------TOE2(3)  --------->AHL20(1)  --- -->AHL20(2)  <---------ZAT6       <-----------RAV1(1)<---------TOE2(3)   <---------AHL20(2) --------   atttaaatggattatagtgtttttagttttttttgttttgttgtgcaaaagtttttaagttaagaaattaaagttttaaatttaatgttataaaaattaa  8856100     --------------->AtSPL3     --------->ALFIN1                                 <---------AHL20(1)     <---------------AtSPL3                           <---------AHL20(2)     --------------->AtSPL8                        --------->AHL20(2)     <---------------AtSPL8              -------->HAHB4    <---------AHL20(2)  --------->DAG2              <-----------GT1      <---------AHL20(2) ---------->DOF2        <---------AHL20(2)        <---------YAB1      <---------LBD16 -->AHL20(1)            --------->AHL20(2)      --------->YAB1    ------->TEIL -->AHL20(2)            <---------YAB1   --------->YAB1<---------AHL20(2)                     ------- ---AHL20(2)  --------->YAB1 <-----------GT1--------->AHL20(2) <---------YAB1                 <------ -------AHL20(2)    --------->YAB1      --------->ICU4--------->AHL20(2)                 <---------DOF5.7(2) ------>AHL20(2)  <---------ARR11(3)    <---------ATHB51   --------->AHL20(2) --------->AHL20(2) ->AHL20(2)<----------DOF2 <---------YAB1<---------ICU4--------->AHL20(2)     <---------AHL20(2) ----   ttaaaaagtggtactttcaaaatcatattattaaacctcttaataatgaattataaattatttatatgaatgctcggaaattaaacaatgtaaacgtata  8856200                                                                          <---------ZAT18                                  <---------bZIP60(1)                     --------->ZAT18                                  --------->bZIP60(1)                     <---------WRKY12                                  <---------At4g35610                     <---------WRKY38(1)                  <xxxxxxxxxxxxxxxxsmallRNA(s)                           --------->TCP16(2)                 <---------MYB52(1)------>ZmHOX2a(2)                    <---------TCP16(1)               --------------->AGL15                                    <---------PCF2           --------->MYB46(3)     --------->At4g35610                   <---------PCF5        <------ZmHOX2a(1)        --------->ARR11(3)                     <---------TCP11(2)        ==================================HOX2a_HOX2a                 <---------MYB46(3)      --------->YAB1           <---------ZAT6                        --------->ALFIN1<---------HSFB2a(2) -->ARR14(2)   <---------------AGL15                          --------->MYB52(1)     --------->HSFB2a(2) ---ARR14(2)  --------->MYB46(3) <---------ARR11(3)     <---------HSFB2a(2)   <---------ATHB12  <---- ----->ANAC46-------->P    <---------ZAT14              --------->HSFB2a(2)<---------ALFIN1   ------>ZmHOX2a(1)   gggaacaataggaacaaccattagtagtgagtagtgatctcactactggcaatttgttcgagactaaggggatgggtccactcatttgtagaagtcctca  8856300                                                                                            ---------                                                                                         <---------YAB1                                                                                    <---------AHL20(2)                            <---------ANAC46                                    --------->AHL20(2)                            <---------ANAC58                                    <---------AHL20(2)                            <---------ANAC58                                   <---------AHL20(2)                        --------->LBD16                                        --------->AHL20(1)                       <---------O2                                            <---------AHL20(1)   -                       --------->DEAR3(1)                         <------MYB83 --------->AHL20(2) ---                      <------NtERF2                               ----------->GT1  --------->AHL20(2)                    <---------DEAR3(1)                            <------MYB46(1)  <---------AHL20(2) -----ALFIN1       --------->ATERF1(1)              ----------->GT1   ---------->DOF2    <---------TOE2(3)   acccttctcatgctcgtagtagtcgccgtggcttgtgttttgttcttggacgagaagtttatttgggaaggtaaaagacaatttatttattaagatttga  8856400  Previous    Next  AGI:  At1g25260.1    Description:  acidic ribosomal protein P0-related. similar to 60S acidic ribosomal protein P0 (RPP0C) [Arabidopsis thaliana] (TAIR:AT3G11250.1); similar to unknown [Populus trichocarpa] (GB:ABK94918.1); contains InterPro domain Ribosomal protein L10; (InterPro:IPR001790) Range:  from: 8853946    to: 8855859    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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