Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                                --------->ANAC58                                --------->AtLEC2                              <---------ANAC58                              <---------ANAC46                     <------ZmHOX2a(2)                         <---------ANAC58                        --------->WOX13(1)                         --------->TGA1a                     --------->ALFIN1                         --------->bZIP60(1)                <-------MYC3                         =====================MYC_MYB       ------->MYC3                         --------->O2  --------->At5g28300  ------->MYC4                         <---------O2 ----------->GT1       <-------PIF5                         <---------TGA1a                    ------->MYC2                         <---------ANAC55(1)                <-------MYC2                         --------->ANAC55(2)                ------->PIF5                         <---------bZIP60(1)                <-------MYC4                         <---------bZIP60(2)               <---------TGA1a                         <---------ANAC58                  --------->TGA1a                         >>>>>>>>>>HY5------->GAMYB        <---------O2                         <---------ANAC55(2)               --------->ANAC46                         <---------ANAC46                  --------->ANAC55(2)                 ------                        ----------->STF1                   --------->O2            --------->LBD16                      ----------->HVH21--------->LBD16   <---------ALFIN1--------->GLK1(2)     ------   <-----------HVH21  ----------->TGA1===============================MYC_MYB     <---------LBD16 --DAG2    <---------ARR14(2) <---------ANAC58----------------------->TaNAC69(2)<---------LBD16<-----   tcatgtgtcagcatgtctggtctagtgacgtggcatgcaaccgtgaaacgttgagtcttccacgtgtcgatcaagaatcgacctcgggagaacaaggagc  8709800                     <---------At4g35610                  <--------P                 <-------GAMYB        --------->ANAC46   --------->YAB1--------->At4g35610       ------->GAMYB<---------MYB46(3)   <---------At4g35610      --------->ANAC58  <---------At4g35610      --------->ANAC58  --------->At4g35610    ---------->DOF2 <------MYB46(1)  <-----------HVH21   --------->ANAC46 <------MYB83  <---------ANAC58 --------->ANAC46<---------ANAC58 <---------ANAC55(1) --->GLK1(1)     <---------ANAC58 <---------ANAC58 --->At4g35610  --------->ATHB12  <---------ANAC55(2)          ----------->RAV1(1)             <----- ----GLK1(1)    <---------MYB46(3)--------->ANAC55(2)   --------->MYB52(1)      --------->MYB52(1)  <   tctccacaacgcacaacttggttggctgatcacaatacgtgtcagaagtctaacaacaaaacagaccacagaaaaaaaaaaaaaacagagtttttgtttt  8709900                                                                                                   --                                                                                                   <-                                    --------->ATHB51                                               <-                                    --------->ATHB12                                               <-                              -------->P                                                           --                              ------>MYB83                                                         --                            --------->AtMYB61                                                     <--                            <---------MYB59                                                       <--                           --------->MYB46(3)                                                     <--           ----------->GT1 --------->DEAR3(2)                               --------->YAB1        ===       <-----------GT1     <---------MYB55(2)                               --------->TOE1(3)     <--  <---------AHL20(2)      ------->TEIL                        --------->At4g35610                 --- --------->AHL20(2) <----------ID1  -------->ATHB1--------->YAB1            --------->TOE2(3)     --- ----AHL20(2)   <---------YAB1------>MYB46(1)     --------->AHL20(2)      <---------TOE2(3)       --- ---------AHL20(2)---------->DOF2  <---------YAB1<<<<<<<<<ARR2<---------At4g35610            --------   attttaaattttctggttataaaagacgaaccaacctattattgagtcacaatcaaattgtgggagatgagtctctaacgataacctctctcttggtgac  8710000                                                      <<<<<<<<<AtERF-2                                                      <<<<<<<<<AtERF-5                                                      <<<<<<<<<AtERF-1         <---------ALFIN1                             <---------ERF1         --------->AtMYB61                            <---------RAP2.3(1)        --------->MYB46(3)                            <<<<<<<<<AtERF-3 ----->MYC3                                           <<<<<<<<<AtERF-4 ------MYC4                                           ------>NtERF2 ------MYC2                                          <---------ANAC46 ------MYC3                                          <---------DEAR3(1) ----->MYC4                           <---------LBD16<---------ATERF1(2) ----->MYC2                          --------->MYB52(1)  <----------DOF2 -------ANAC55(2)                   <---------ALFIN1 --------->ATERF1(2)                       <----- ------ABF1                    <---------ATHB12      <---------RAP2.6(2)                       <----- -------TGA1a             --------->ANAC46          --------->RAP2.6(3)                        <----- =======================================MYC_MYB--------->ATHB12                              <------- -------O2      --------->At4g35610--------->DEAR3(1)<---------RAP2.3(3)                 <---------ARR11(3) ------>ANAC55(2)       <-----------GT1 --------->LBD16<------NtERF2                     --------->ARR11(3) ------>TGA1a<---------At4g35610   --------->MYB46(3)<---------RAP2.3(2)                <------ZmHOX2a(1) ------>O2   --------->At4g35610------->GAMYB <---------YAB1                          <---------TOE1(3) --->HVH21  --------->DEAR3(1) --------->MYB46(3) --------->ALFIN1------>ZmHOX2a(1)   <---------TOE2(3)   acgtgtttagaccaccgctgcttaataaacccaatcgcccaccggaacatgagtggcggctatacttcctctctatttcttctcttctaaggatttttcg  8710100                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                      <---------YAB1                                                      ----------->TBP                          <-----                                              --------->YAB1                                   <-----                                              --------->TOE2(3)                                <----- ----ANAC58                               <---------AHL20(2)                             <-----------RAV1(2) ----ANAC58                              --------->AHL20(1)                            <-----------TGA1 ----ANAC46                              <---------AHL20(1)                            <-----------HVH21 ----GT1                                 --------->AHL20(2)        *TSS             ------->GAMYB   tgtctcaaaactttcaaagactctcagtttctatctctgtgaatataatcttagttataaaaaaatgggtctctcgcattttccaacagcgtcagaagga  8710200    --------------->AGL15                                                                   <--------    <---------ALFIN1                                                                        ---------    <---------------AGL15                <-------GAMYB                                      ------->TEIL   ----------------->AGL1         <---------ATHB12                                         <---------GLK1(2)   <-----------------AGL2       --------->WOX13(1)                                  --------->LBD16 -ZmHOX2a(1)              <---------MYB46(3)                                   <---------ANAC58 ----------AtSPL8        <---------MYB52(1)              <---------AtMYB61     <---------ANAC58     - ----------AtSPL3       <-------GAMYB   <-----------RAV1(1)               <-----------RAV1(1)     <--   gtactaccacttctggtgatgaacacggttgtttcaatcactctgttgaagaacatggtgaggtctgtttttcaaattgttgcatccgagactgaatctt  8710300      --------->CCA1(2)                     --------->GLK1(2) -ARR14(2)                           <---------HSFB2a(2) >ARR14(2)<----------ID1   --------->ARR11(3) -------->AtLEC2         <---------YAB1    <---------GLK1(2)                                 >>>>>>>> -------AtLEC2  ------->TEIL         --------->HSFB2a(2)                                 <------ZmHOX2a(1)   ccatggagatagacgacgagcctgaagatgattttgttactagaagaatctcgataacacagttcaagtctctatgtgagaacatagaagaggaagaaga  8710400                    --------->ALFIN1                    <---------ANAC58                    <---------ANAC58                  <---------ANAC58                  <---------ANAC58              <---------ZAT14              --------->ZAT14             --------->ALFIN1                                             --------->ANAC58           <---------ANAC58                                         <---------ANAC46           <---------ANAC46                                         <---------ANAC58           <---------ANAC58                                         <---------ANAC58         <---------ZAT14                                       <------MYB83        --------->ALFIN1    <-----------RAV1(1)                <------MYB46(1) --------->ARR14(2)      --------->ALFIN1    <----------DOF2                      <---------MYB46(3)           <--------   --------->DAG2 <---------ANAC46               <------ZmHOX2a(1) --------->MYB52(2)  --------->ANAC46 ---------->DOF2<---------ANAC46     ---------->DOF2          <---------AtMYB61<---------ARR14(2) >TBF1<---------ANAC46   <----------DOF2   <------ZmHOX2a(1)<-------GAMYB --------->ANAC58  <--------   agagaaaggtgtggagtgttgtgtgtgcctttgtgggtttaaagaggaagaggaagtgagtgagttggtttcttgcaagcatttcttccacagagcttgt  8710500                             <-------MYC2                       --------->ANAC46                       <---------ALFIN1                       --------->ANAC58                       --------->ANAC58                     <---------ALFIN1                     ------->GAMYB                     --------->AtMYB61                    --------->MYB46(3)                  <-----------GT1                  <---------ICU4     <----------DOF2            <------MYB83 --------->ANAC46            <------MYB46(1)  ------->MYC2                --------->ALFIN1          <----------DOF2            ----------->GT1  ------->MYC3                <---------ZAT6  <-----------GT1      <------ -ANAC58   --------->MYB46(2)<-------MYC3<---------AtLEC2<---------AtMYB61 <-----------GT1   <------- -ANAC58   --------->MYB59<---------ALFIN1    <-------TEIL<---------MYB46(3)  <----------DOF2<-------   ctagacaactggtttggtaataaccacaccacatgccctctttgcaggtccattctctagtggtggaatcttgttttacactttccttttgttttgcttt  8710600                                      <----------DOF2                                      <---------DAG2                                    <---------------AGL15                                    --------------->AGL15                                    =================================================================                                   ----------------->AGL1                                   <-----------------AGL2                                   <-----------------AGL1                                         ---                                  <-----------GT1                                                <---    <------ZmHOX2a(1)        <------------------------ANAC81     <----------DOF2                ===== ----DOF2             --------->ARR14(2)                 ---------->ID1<---------ANAC58         ----- --ANAC58      <---------GLK1(2) <-----------GT1         <-----------GT1                       ------ --ANAC58<-----------GT1  ------>ZmHOX2a(1)             <-----------GT1<---------ANAC58----------->GT1   gctataggaaaataccacattctctatcctctgttttaccctttttggtgtttatgtttttccccttcttttttcttggtatggagaaggggttttttca  8710700  Previous    Next  AGI:  At1g24580.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G67856.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42518.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8710167    to: 8710811    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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