Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------GLK1(1)                                       <------ZmHOX2a(1)                                     <---------TOE2(3)                                    --------->YAB1                                ================HOX2a_HOX2a                                <------ZmHOX2a(1)                                =================HOX2a_HOX2a                             <------NtERF2------>ZmHOX2a(2)                            --------->LBD16     <---------At4g35610   --------->DEAR3(1) ---------TGA1a           <---------LBD16<------ZmHOX2a(2) -------->ANAC58        ===============HOX2a_HOX2a -------->ANAC55(1)     ------>ZmHOX2a(2)--------->GLK1(1) -------->ANAC58        ======================HOX2a_HOX2a -------->ANAC46       ================HOX2a_HOX2a      <---------YAB1 ---------O2           =======================HOX2a_HOX2a--------->ZAT6 -------->O2           <------ZmHOX2a(2)<---------ARR11(3) -------->TGA1a       --------->ARR14(2)--------->ARR14(3)                     <---------ARR14(2) -------ALFIN1        <---------ARR11(3)--------->ARR11(3)               --------->DAG2 -----ALFIN1          --------->ARR11(3)--------->ARR14(2)              ---------->DOF2 ->ARR14(2)           <---------ARR14(2)<---------ARR14(2)           ------>ZmHOX2a(2) --ARR14(2)          <---------GLK1(1) =====================================HOX2a_HOX2a         <----   acacgtctgctcttgaatactggagatcgccggaggaataaggatctccaaaaaacttatcactaatttgatcgaaaagcgtttctcgtctcaaattttt  8706900                                                                     ----------->GT1                                                                    <---------HSFB2a(2)                                                                    --------->HSFC1(1)      <-------MYC3                                                                    --------->HSFB2a(2)     ------->MYC3                                                      <---------ANAC58         <---------YAB1                                                      <---------ANAC46         <---------TOE1(3)                        <-----------GT1               <---------ANAC58      <---------AHL20(2)                     <---------ICU4          --------->YAB1     <---------ANAC46----------->GT1 -------RAV1(1)     --------->ICU4       <----------DOF2       ---------->ID1  <---------TOE2(3)   gtggtgttctacttgtaatgtcatttttacaaatccaagttttcttttcatcaccttcgtgttttgtcgtctagaaaatttatggttaatcacacgttga  8707000                                                                                                  <--                                                                                              <------                                                                  --------------------->WRI1 <-------                                                        <---------ANAC58                 --------->AHL20(2)                                                     --------->KAN4(2)                  --------->AHL20(2)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->AHL20(1)                                <------------CBF   <------ZmHOX2a(2)                 <---------ARR11(3)                           --------->ANAC58       <---------ARR11(3)                 --------->AHL20(2)                           --------->ANAC58       --------->ARR11(3)<---------YAB1 --------->ANAC58                         ---------->DOF2       --------->YAB1<----------DOF2       --------->ANAC58                     ----------->HVH21  <----------DOF2 <---------ANAC58------>ZmHOX2a(2)<---------AHL20(2)   atgtagcattgttgttaatctaggtgacaaagcaaattgagtcttttaatcagatcattcgtgctttgttttgatcgtatagctcaagaaattaattaca  8707100                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                               ------                                        <------------CBF ---------->DOF2              --------->GLK1(2)                                      <---------YAB1--------->YAB1          --------->MYB52(1) ------                             <---------ANAC46      <---------YAB1           ------>MYB83       ------                          <---------AtMYB61   <---------At4g35610           ------>MYB46(1) <xxxxxxxx -------MYB52(1)         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->YAB1    <---------ARR14(2) ---At5g28300           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ----------->GT1         --------->ARR14(2) ----GT1          <------ZmHOX2a(1)  ------------>CBF  --------->YAB1     <---------MYB59  <---------   gtttgttttatcgataaacaggagtgagatggtgttgatgacaattggagcttataatcaaaagttgtaataaaaacctaactatgggaatcttgtcacg  8707200     ---------->DOF2                                                                           <----- ------->ANAC58                                               <---------MYB46(3)              <------ ------->ANAC58                                              <---------WOX13(1)               ------- --------->GT1                                               <---------YAB1                  xxxxxxxx -------TOE2(2)                                             <------------CBF                 <------- -------TOE1(2)                                            --------->ATHB12               xxxxxxxxxxx --------RAV1(2)                                          <---------YAB1     ------------>CBF-------- --->ANAC46                                               --------->ICU4  ------->GAMYB   <xxxxxxxxxx --->ANAC58           <---------CCA1(2)              <------MYB83        --------->MYB46(3)<------ZmHOX2a(1) --->ANAC58      ---------->ID1                      <------MYB46(1)   <-----------GT1<xxxxxxxxxxxxxx xxxxxxxxxxxxxxxsmallRNA(si3)                      <---------WOX13(1) <---------YAB1  <xxxxxxxxxxxxxx --HVH21     <----------DOF2  <------------CBF    <------------CBF <---------YAB1<---------ATHB12  <-   caggtaaaaaagaccctttgtctcgtttctcttattgttctctctaaaatcagattggtgatgattgttgttataacagcccaattagtagtaggagatc  8707300   <---------YAB1 --------->At4g35610 <---------At4g35610 -ZmHOX2a(2) ---ARR11(3) -->ARR11(3) xxxxxxxxxxxxx>smallRNA(si3) --GLK1(1)       <----------DOF2 xxxxxxxxxxxx>smallRNA(si3)                                          <----------DOF2            <---- ->GLK1(1)    ------->TEIL                                        --------->ARR11(3)           <----- xxxxxxxxxxxxxsmallRNA(si3)       <---------ANAC58       --------->ATHB12     <----------DOF2  ------ xxxxxxxxxsmallRNA(si3)           <---------ANAC58      <---------YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxsmallRNA(si3)     ------->GAMYB            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <-------- ----------RAV1(2)   <-----------GT1         <----------DOF2      <---------ARR11(3)  <------ZmHOX2a(2)   atcagatgatagcatgaagctttttacaacagcattgtttgctatagcttttggcattgttattggactatcttttccatctttatggatcactgaggtt  8707400                                                                                  <xxxxxxxxxxxxxxxxxx                                                ---------->ID1               --------->ANAC58                                              <-----------RAV1(1)            --------->ANAC58                                              <---------MYB46(3)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               --------->ARR11(3)         --------->ICU4<---------ETT(2)   --------->HSFB2a(1)                  <----------DOF2             --------->MYB52(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <-----------GT1 <-----------GT1        <---------MYB52(1)     <---------ANAC46 --------->LBD16 ---TEIL<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------LBD16 ----ARR14(2)  --------->ARR11(3)    <-----------GT1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --->ARR14(2)  <---------ARR11(1)--------->AHL20(2)  --------->ANAC58 --------->REM1(2)    <---------HSFB2a(1) -TOE2(3)     <---------CCA1(2)<---------ARR11(3)    --------->ANAC58<---------ANAC46--------->LBD16   cttcttatttctcttcaaatcttttacttcttagattttatacttcgtttgtcgcatgccatttttgtattgtgtagacaagtctcccgagaaaccttct  8707500                                      <---------ALFIN1                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               --------->GLK1(1)                              --------->ARR14(2)                              <---------ARR14(2)                            --------->LBD16                           --------->HSFB2a(2)                           <---------HSFB2a(2)            --------->ARR11(3)                           <---------ANAC55(2)            <---------ARR11(3)                           --------->ANAC55(2)           <---------GLK1(1)                          <---------LBD16              --------->YAB1                          <-----                        <---------ARR14(2)      --------->ANAC58                         <---------ALFIN1                        --------->ARR14(2)      --------->ANAC58                    --------->GLK1(2)                        --------->GLK1(2)     ---------->DOF2  ---------->DOF2    <------ZmHOX2a(1) xxxsmallRNA(si3)      <---------GLK1(2)  ------>ZmHOX2a(1)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   tcgctccattgctatctcacttagagattccggaattgcaactcctcacaaagccattgatatctcaaaggcatgttttatgtaggaatctacacatctt  8707600                                                --------->CCA1(2)                                               --------->ARR11(1)                                               --------->ARR11(3)          <------NtERF2         ----                                             ----------->ARR10             <----------CDC5<---------LBD16                                            ----------------->AGL1        --------->At4g35610   <----                                           <---------ZAT18     <---------ARR14(2)        ------>MYB46(1)                                       <-----------RAV1(1)     --------->ARR14(2)        ------>MYB83                                       <---------AtMYB61--------->MYB46(3)<---------At4g35610<-------                             <---------TOE1(3) <---------ARR14(2)        <---------DEAR3(1) --------- -----DOF2                   <---------TOE2(3) --------->ARR14(2)  ------>ZmHOX2a(1)<-----------GT1   tttcatgttttaagcacaaaaaccaaagtttaaggcatgttttggtgcagatatgggaaccatcaaatcctcgaggcgctgagagattaccatccggtat  8707700         --------->ARR14(2)        <---------LBD16                                             ------         --------->GLK1(2)--------->LBD16                         <----------DOF2<----------DOF2 ----->ATHB12            <---------ANAC46                   ------>ZmHOX2a(1) --------->ARR11(3)    - -----YAB1           <---------ANAC58                   <-----------GT1       <---------ARR11(3) <--- --MYB52(1)          <---------ANAC58        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->YAB1--- >LBD16  <---------ARR14(2)   <---------GLK1(2)   <---------TOE2(3)       ----------->HVH21  <-------   cattgcatccgaatcggacttgtacttgcgcagattatgggggaaccctgatgaggtttttcctcactcttttgatatgacatctttcatatgtgatcaa  8707800  Previous    Next  AGI:  At1g24570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67850.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67850.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42517.1); contains InterPro domain Protein of unknown function DUF707 (InterPro:IPR007877) Range:  from: 8707314    to: 8709576    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version