Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                             --------                                      <---------GLK1(2)                                      --------         <------ZmHOX2a(2)          <---------YAB1                                     --------->SPL7        --------->ARR11(3)          <---------TOE2(3)                                 --------->ALFIN1        <---------ARR11(3)          <---------TOE1(3)                               <---------ANAC58    <------ZmHOX2a(2)     --------->DAG2                              --------->LBD16<---------SPL7  <---------At4g35610    ---------->DOF2        <-------TEIL       ------>MYB83     <---------ANAC46  --------->At4g35610    --------->MYB52(1)--------->YAB1          ------>MYB46(1)  <---------ANAC58   actcagatcagatcatggattaaaacataaaggagattaagattatcagattcaacaaattagtataccatccgagattggacatagcgtagggcaagct  8653400                     <---------MYB46(3)                    <---------DEAR3(1)                    <---------ANAC46                    <---------DREB2C(2)              <---------ATHB12              --------->MYB46(3)             ------>MYB83             -------->P----------->HVH21             ------>MYB46(1)                                  <---------HSFB2a(2)            --------->MYB55(1)                                --------->HSFB2a(2)           --------->AtMYB61                                  --------->HSFC1(1)           <---------MYB111(2)                               <---------LBD16           <---------MYB46(2)                              --------->ARR14(2)            <---------DEAR3(1)           --------->DEAR3(1)                              --------->GLK1(2)             --------->ETT(2)       --------->At4g35610                              <---------ANAC58             <---------ATHB12      --------->ANAC58--------->At5g28300     --------->AtMYB61                     ------>MYB46(1)      --------->ANAC58<------NtERF2     --------------->AtSPL8<---------HSFC1(1)    ------>MYB83 ---ZAT2   <---------MYB111(1)     --------->DAG2       <---------ANAC58   ------>ZmHOX2a(2)      <-- ->ANAC58  <---------MYB55(2)     ---------->DOF2<---------ALFIN1      ----------->HVH21 --------->DEAR3(1) ->ANAC58  --------->MYB46(3)----------->GT1--------->SPL7 <---------ARR14(2)    --------->MYB46(3) <   aagaacaccagcaccaaccatggcggtgacattgtgaaaagcagagtaccaccacttagcgtttctggaagatgtgatcggtaaccaatcgtcgacgttc  8653500                --------->bZIP60(2)             <---------ALFIN1            --------->LBD16            ------>NtERF2            <------NtERF2           --------->RRTF1(3)           --------->DEAR3(1)           --------->RAP2.6(2)           --------->ANAC58           --------->RRTF1(2)           --------->RAP2.3(3)           --------->ANAC58           --------->RAP2.3(2)           --------->ANAC46          --------->RAP2.3(1)          --------->ATERF1(1)          <------NtERF2          --------->RRTF1(1)          --------->ERF1         --------->DREB2C(1)         <---------DREB2C(1)         <---------At4g35610         --------->At4g35610         <---------ATERF1(1)         ------>NtERF2         <------NtERF2        --------->DEAR3(1)        <---------ATERF1(2)        <---------DEAR3(1)        --------->ATERF1(2)                    <---------ARR14(2)        --------->ANAC46                       <---------ARR11(1)        --------->RAP2.6(2)                    <-----------ARR10       <---------RAP2.6(2)                     --------->ARR11(3)       --------->ATERF1(1)                     <---------ARR11(3)     <---------WRKY18(1)         <---------ZAT14  <---------AtLEC2         ------>NtERF2       --------->ARR14(2)  <---------ANAC58        ----------->HVH21   <---------CCA1(2)  <---------ANAC58      --------->At4g35610--------->LBD16                      <------MYB46(1) -------At4g35610--------->TOE2(3)<-----------GT1            <---------AHL20(2) <------MYB83 ---------YAB1<---------ALFIN1   --------->ZAT14             <---------YAB1<---------ZAT6 ---------->DOF2   ttctgcttggccgccgcaacctcactcgctgacatttcactgttccccatatctccttgtgatataatcgagagatagtgtttggtttttgagaaagaga  8653600                                                                                                <----                               --------->YAB1                       ----------->HVH21           -----                            ---------->DOF2                 <---------ARR11(3)                 ------                         <------ZmHOX2a(1)                  --------->ARR11(3)                 <-----               <---------ARR11(3)                      <------ZmHOX2a(1)            <-----------GT1   <-------TEIL--------->ARR11(3)--------->CCA1(2)  <------ZmHOX2a(1)          <------ZmHOX2a(1)<----  --------->CCA1(2)   <------ZmHOX2a(1)   --------->ICU4  ----------->ARR10  <---------TOE2(3) <-----   ttagatacaattaagaagattttaggaggataaagataagagtgatatttaagaggaggatagatattctctgacggtttaggattttacctgcttaatt  8653700                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               ------                                                    --------->GLK1(2)                          <----- -----ICU4                                <---------ANAC55(2)      <---------ARR14(2)          ------ --->HAHB4                     ----------->GT1   ----------->ARR10 --------->ARR14(2)  --------->MYB52(2) --->ICU4          <---------ANAC58  <---------AHL20(2)    <----------DOF2           <---------MYB52(1) ----ATHB51        <---------ANAC58 --------->AHL20(2)     <---------DAG2      --------->ICU4  ------ -----AHL20(2)     <---------ANAC46 --------->ICU4 <---------GLK1(2)           <---------HSFB2a(1)<-- ----YAB1--------->ATHB12<---------YAB1   --------->ANAC55(2)    --------->LBD16   <---------MYB46(3)   attctattcaacgatttgttagcgtttatgagagtgtaataaataggtgatgagattctgacttttccgaatttgaagggaatgtttgttagtttgtttg  8653800 --MYB46(1) --MYB83                                              --------->At4g35610 --->MYB46(2)     <------MYB83                   --------->AtMYB61                                  - --->MYB111(2)    <------MYB46(1)               <------NtERF2                                    <--- ----MYB46(3)    <---------AtMYB61         --------->ANAC46           <---------YAB1--------->AHL20(2) --->MYB59       *TSS <----------DOF2      --------->ANAC58  <---------ZAT2   ------------>CBF  <---- --->MYB111(1)   --------->MYB59           --------->DAG2    <---------At4g35610    <---------AHL20(2) ------P <---------ANAC46                  --------->ANAC58  --------->At4g35610   --------->AHL20(2)   gtagttttgtttagtgtgtttggtctttttttttgcccgaggcataaggcaccatcggctggaagctgtttcatgcttagaccaatttaaatactaattt  8653900                                                                                                  <--                                                                                                  ===                                                                                                 <---                                                                                                 <---                                                                         <-----------GT1     <-------                                                                       <-----------GT1      ---------                                                                   <----------DOF2          <--------     <---------ATHB12          <----------DOF2                     <---------DAG2        --------->ATHB12  <---------ALFIN1       <---------GLK1(2)                   --------------->AtSPL3   <---------AtLEC2 ------------>CBF       <--------ATHB1         <----------DOF2   <---------TOE1(2)    <---------ANAC58 -------->ANAC46        --------->YAB1        <---------ANAC58<---------ANAC58   --------->ARR14(2) ------At5g28300       <---------ATHB12       <---------ANAC58<---------ANAC58   <---------ARR14(2) < -------GT1            --------->ICU4    <---------bZIP60(2) --------------->AtSPL8   <---------ANAC58   acccccaatcgttcttcttgattcaatgattctctttacattgacatggcttttttttgtaatttcgtacttttttctccctgtatttgcatgatttatt  8654000                                           ------>ZmHOX2a(2)                                     --------->ANAC55(2)                                     --------->At4g35610                                     <---------ANAC55(2)                         <---------AHL20(2)-- ---------------AG                   ----------->RAV1(2)                      <---------ICU4       <- ========================================MADS_MADS                           --------->ICU4       <-- --------GT1                 <---------AtLEC2--------->MYB52(1)            --------->YAB1        ---- ------AHL20(2)          <----------DOF2 <---------ARR11(3)              --------->AHL20(2)      <--- --AHL20(2)              <---------------AGL15                        <---------AHL20(2)         <--- >AHL20(2)   <---------At4g35610   <---------WRKY38(1)                --------->AHL20(1)         ---- -AHL20(2)   --------->At4g35610 <-----------HVH21                    --------->AHL20(2)   >>>>>>>>>GATA-1 ----------DOF2       <-----------GT1<---------At4g35610   <----------DOF2 --------->AHL20(2)   -----   ttcttttttggatagagctgaatttttcttttcatggtcacctgatctaacgagtgtttcgcttttaaaaaataaaataatatttattcgatagataaat  8654100                                       --------->AHL20(2)              --------->ICU4----------->HVH21              <---------YAB1--------->WRKY12             <---------TOE2(3)         <---------AHL20(2)                          <---------ARR11(3)           --------->AHL20(2)    ----------->RAV1(1)                               --------->ARR11(3)           <---------AHL20(2)   --------->DREB2C(2)                               <---------CCA1(2)          --------->AHL20(2)--------->WRKY38(1)                                 --------->AHL20(2)  <----------DOF2           --------->WRKY45                                --------->AHL20(2) ------->ARR11(3)         --------->At4g35610                               <---------AHL20(2)      - --------ARR11(3)         <---------At4g35610                              --------->AHL20(1)       < -------CCA1(2)  <---------YAB1 <---------ETT(1)                           --------->AHL20(2)     --- ----->AHL20(1)<---------ICU4<---------WRKY18(1)               <----------DOF2  <---------AHL20(2)<-- ------AHL20(1)-------->HAHB4>>>>>>>>>>WRKY11                  --------------->AGL15            ----- ------ARR11(3)--------->YAB1>>>>>>>>>>WRKY6 <---------At4g35610           <---------AHL20(2)   <---- ----->ARR11(3)--------->ATHB12-------->ZAP1 --------->At4g35610           <---------AHL20(1) ------- ---->AHL20(2)<---------ATHB12 --------->DEAR3(2)              <---------------AGL15          <------   atatctttctcatttaatgattattttgagttgaccgacaaaaaattagctgtttttttgtttttcttttagtagaatttatttatatcttgatatatat  8654200          --------->AHL20(2)--------->AHL20(2)          <---------AHL20(2)<---------AHL20(2)        --------->AHL20(2)--------->AHL20(2)        <---------AHL20(2)<---------AHL20(2)      --------->AHL20(2)<---------AHL20(2)                                                         --      <---------AHL20(2)--------->AHL20(2)                                                 <---------AHL20(2)    --------->AHL20(2)<---------AHL20(2)                                                   <---------AHL20(1)    <---------AHL20(2)--------->AHL20(2)                                                   --------->AHL20(2)  --------->AHL20(2)<---------AHL20(2)                            --------->AHL20(1)       --------->AHL20(1)  <---------AHL20(2)--------->AHL20(2)                            <---------AHL20(1)  <---------AHL20(2) -------->AHL20(2)<---------AHL20(2)                              <---------ARR11(3)  <---------YAB1 ---------AHL20(2)--------->AHL20(2)                        --------->ARR11(3) --------->YAB1     <-- ------>AHL20(2)--------->AHL20(2)   <---------ARR11(3)     <---------ARR11(3)--------->ICU4      --- -------AHL20(2)<---------AHL20(2)  <---------CCA1(2)       --------->GLK1(2) <---------ATHB12   <--- ---->AHL20(2)--------->AHL20(2)--------->AHL20(2)    <<<<<<<<<MYB98     --------->ANAC46 --------->AHL20(2) -----AHL20(2)<---------AHL20(2)<---------AHL20(2)   ----------->GT1     --------->ANAC58 <---------AHL20(2) -->AHL20(2)--------->AHL20(2)<---------AHL20(2)    ----------->GT1<---------AHL20(2) --------->AHL20(2) ---AHL20(2)<---------AHL20(2)--------->AHL20(2)   --------->AHL20(1)    --------->ANAC58<---------YAB1   atatatatatatatatatatatatatatatatatatatatatctaagagaaaatatgttaaaaatctatatatttaagcaataactatattattaaatta  8654300  Previous    Next  AGI:  At1g24400.1    Description:  LHT2 (LYSINE HISTIDINE TRANSPORTER 2); amino acid transmembrane transporter. similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G40780.2); similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G67640.1); similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G40780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46653.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46673.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46659.1); Range:  from: 8651396    to: 8653817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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