Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------AHL20(2)                                                                      --------->AHL20(2)                                                                  <---------AHL20(1)                                                                  --------->AHL20(1)                                                                  --------->AHL20(2)  --------->AHL20(2)                                              <---------AHL20(2)  <---------AHL20(2)                                             --------->AHL20(2)                <-  --------->AHL20(1)                                             <---------AHL20(2)                --  <---------AHL20(1)                                     <---------ICU4   <---------ICU4          <-- ------>AHL20(2)                                         <--------HAHB4---------->DOF2            --- -------AHL20(2)                        <---------ARR11(3)   --------->AHL20(2)      --------------->AtSPL8 ----->AHL20(1)                         <---------ICU4  <---------ATHB12 --------->ICU4        <----- ----->AHL20(2)                         --------->ARR11(3)   <---------AHL20(2)      <---------------AtSPL8 ------AHL20(1)                         --------->AHL20(1)   <---------AHL20(1)      <---------------AtSPL3 ------AHL20(2)  <---------ATHB12       <---------AHL20(1)   --------->AHL20(1)    --------->YAB1 <-- --AHL20(2)    --------->WOX13(1)  --------->AHL20(2) --------->WOX13(1)<---------TOE2(3)      ------   ttattttattgtattttcaatcaacttcggtattagttttaatattttctactaatccatcattttattaaattaaagattacaaaaatagtacttataa  8647800                                                                                                 ----                                                                                                 ----                                                                                              <------              --------->ANAC58                                                                -------          <-----------GT1                                                                    --------   <---------AHL20(2)                                                                     <---------AHL20(2) <---------YAB1                                                                          --------->AHL20(2) --------AHL20(2)                                                          --------->ANAC58 <-------- ------->AHL20(2)                                                    --------->AHL20(2)--------->AHL20(1) -------AHL20(2)                                <<<<<<<<<ARR1     <-----------GT1      <---------AHL20(1) ------>AHL20(2)                                <<<<<<<<<ARR2 <---------YAB1      --------->AHL20(2) ----AHL20(2) --------->ANAC46                  <---------ATHB12 <---------YAB1   <---------AHL20(2) -------AHL20(1) --------->TOE2(3)<---------CCA1(2)    <---------AHL20(2)  --------->ANAC58--------->YAB1 --->AHL20(2) --------->ANAC58<---------ANAC55(2)--------->YAB1--------->YAB1    --------->YAB1<-----   attattttttagttacaagccttagttagattacttaaatctcatttacaatcatatataatctattataactaaataagctattttaatatataataat  8647900                                                               <---------ZAT6                                                        ------>MYB46(1)                                                     --------->ANAC58                                                     ----------------->AGL3                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <---------AHL20(2)        <---------ZAT14                      <---------YAB1      <xxxxxxxxxxxxxxxxsmallRNA(i)                   <---------YAB1         <-------TEIL  ------>MYB83                 <---------ICU4         --------->ARR14(2)     ----------->GT1                 --------->YAB1         <---------ARR14(2)--------->YAB1                 -------->ATHB1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                --------->ICU4     --------->O2   <---------ZAT18      =======================================bZIP_DOF--------->ANAC58   --------->ZAT14      ---------->DOF2<---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  --------->ZAT6<---------AHL20(2) <---------ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----->TOE2(3)  <---------YAB1     <---------bZIP60(2)--------------->AGL15 ----->YAB1     --------->AHL20(1) <---------TGA1a--------->ZAT14     --------->ANAC46xxxxxxxxxxxxxxx ---ICU4        --------->AHL20(2) <---------O2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->YAB1     --------->ICU4        <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ->ICU4 ----------->GT1 --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->DOF2  ---- -AHL20(2)   <---------AHL20(2)    <---------ANAC58 ----------->RAV1(1) <---------ZAT14    --------->ZAT6 ----TOE2(3) --------->AHL20(2) ----------->HVH21 --------->ZAT18     --------------->AtSPL8    <----   gttaacacaaaagaaaaaattattattttaatatttgacgtggatacagtagtgcaccaaatatagtgttacactgtacaaaaaaagagaatcacactat  8648000                                                         <---------TOE2(3)                                                         <---------TOE1(3)                                                        <-----------GT1                                                       <-----------GT1                                 ----------->GT1    <---------YAB1                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------ANAC58        ------                         <---------ANAC46        <---------MYB52(1)    <---------ANAC58        ------                     <---------WOX13(1)        --------->O2            <---------ANAC46      --------                    <------------CBF           --------->ANAC58       <------NtERF2         ---------                   --------->ATHB12    <---------ICU4 <---------AHL20(2)<-------GAMYB       <--------                   <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ANAC46     --------->ALFIN1        ---------   <---------ZAT18<---------YAB1--------->DAG2 --------->ANAC58   --------->O2             --------->MYB46(3) xxxxxxxx>smallRNA(si3)  ----------->GT1     <---------ALFIN1    <---------LBD16        --------->MYB46(3) ----->YAB1 <---------At5g28300---------->DOF2 --------->bZIP60(2)<---------O2         --------->ANAC58 -----YAB1 <-----------GT1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->LBD16     --------->ANAC58   tatagtgcaaattataccgtctgattggagtgaaaaagtaaacatgcccacgttattttaacgttttcccgtggcgttggacttggcctaagcaccacca  8648100       <---------ANAC55(2)                                                 --------->ZAT14       --------->ANAC55(2)                                    <---------RVE1(1) --->AtMYB61                          --------->ANAC58        <---------CCA1(1) ----->RAV1(1)                        --------->ANAC58       --------->ARR11(3) --->RAV1(1)                    --------->RAP2.6(3)          --------->ARR14(2)                    -- >DEAR3(1)                 ------------>CBF                  <---------ARR11(3)                    <- -ALFIN1                  --------->ANAC58 --------->DAG2    <---------ARR14(2)                  <--- >AtMYB61                 --------->ANAC58---------->DOF2   <------ZmHOX2a(1)                   <----   caaatagtctcgtaatcacctagaggtctagcaattcggcacgataaagctaatttgccagaggatatttcataaactgaagtctcaaaatgttgaagag  8648200                                                    --------->WRKY38(1)                                                    <---------ZAT14                                                    --------->ZAT18                                                    --------->WRKY12                                                 <---------ANAC46                                                 <---------ANAC58                                                 <---------ANAC58                --------->At4g35610                                         <---------At4g35610                     <---------At4g35610                                         --------->At4g35610            --------->ZAT6         <---------ATHB12               ----------->RAV1(1)             --------->ANAC58 ------->At5g28300                   --------->ANAC58                   --------->ANAC58 ----------HVH21                     --------->ANAC58                   --------->ANAC46 ------DEAR3(1)                      --------->ANAC46                 <-----------GT1 -----------------WRI1              <xxxxxxxxxxxxxxxxsmallRNA(i)    <----------DOF2<----------DOF2---   cggtgagaccaatggtgtccaaagtaatgtggtaagagcaagcagcagaatgcgtggactggttgtatttctttacgctactgagctctaagtttttctc  8648300                                                                                                    <                                                                                                    <            ---------->DOF2                                                                         <          --------->ANAC58                                                                       <---          --------->ANAC58                --------->ANAC58                                      <----  <---------ICU4                 <-------TEIL                                          <---------LBD16 --->ZmHOX2a(1)         ----------->GT1   --------->ANAC58    ------->TEIL            ----------->RAV1(2)   ctaatattgatcaagaaagaattgtagggtaaaaatacatagacaaggaaacaagaagagcatgcatttatagagcgagtttaatcaaacctggagcaaa  8648400                                           <------ZmHOX2a(1)                                ---------                                          --------->ANAC58                                  ---------                                          --------->ANAC58                                  <-------- <---------LBD16                     --------->ANAC58                                       --------- <<<<<<<<SPL5                        --------->ANAC58                                     --------->ALFIN1 <<<<<<<<SPL1    ----------->RAV1(2) --------->ANAC46                                --------->AtMYB61 <<<<<<<<SPL4 <------NtERF2  <------ZmHOX2a(1)                       <---------GLK1(2)---------->DOF2 ------------AtSPL3        <---------TOE2(3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------------SPL14     ---------->DOF2  ----------->HVH21  <---------ICU4         --------->ANAC46   ttgtacggatgaaggccgagcctggcataaaggataaccaaggcaggacatggagaagactcatcgttacagattgtttcatttccaccaaagtgtggta  8648500       ---------->DOF2  <----------DOF2  <---------------AGL15  --------------->AGL15 <-----------------AGL3     --------->ANAC58            ---------->DOF2                      -------- ----------------->AGL3<----------ID1           ----------->TGA1                             <------- ------>AtSPL3   --------->HSFB2a(2)      <------ZmHOX2a(1)                          <---------MYB52(2) >ALFIN1     --------->GLK1(1)---------->DOF2   ----------->HVH21                 --------->MYB46(3) -------AtSPL8   <---------HSFB2a(2) <-------GAMYB    <---------YAB1       <----------DOF2  --------- ------>AtSPL8--------->ZAT6--------->ANAC58  --------->ALFIN1             <---------DAG2   <--------   ctctctttataaaggaactctagaagcgacaagaaagagggttaggatgtgtgacgatgaaagacatatgtgaatcgctttacaacgactaacaatgatg  8648600               ===================================HOX2a_HOX2a               ====================HOX2a_HOX2a               ------>ZmHOX2a(2)              <------ZmHOX2a(2)                                              --------->AtMYB61              =====================HOX2a_HOX2a                              --------->MYB46(3)              ====================================HOX2a_HOX2a              ------>NtERF2             <---------AGP1                                               --------->RAP2.6(2)             --------->ARR14(2)                                         ------>NtERF2             --------->ARR11(3)                                        --------->LBD16             <---------ARR11(3)                                        --------->ANAC46             --------->GLK1(2)                                         ------>NtERF2             <---------ARR14(2)                                        <---------ATERF1(1)       <---             <---------ARR11(1)            <------ZmHOX2a(1)          --------->DEAR3(1)         <---             <-----------ARR10           <---------TOE1(2)           <---------LBD16          <------            <---------ARR14(1)          <---------LBD16              --------->ATERF1(1)     <-------            <---------CCA1(2)     <----------DOF2                 ------>NtERF2              --------     <-----------GT1<-----------GT1     --------->LBD16          ----------->HVH21           -------- ->YAB1    --------->LBD16     --------->ARR11(3)              ------>ZmHOX2a(1)             -------- --ICU4  <---------LBD16       <---------ARR11(3)              --------->At4g35610         <---------RAP2.6(2) >ICU4<---------At5g28300     <---------CCA1(2)                <---------At4g35610         <---------DEAR3(1) -ATHB12 --------->LBD16    ------>ZmHOX2a(1)                  ----------->RAV1(2)        <---------At4g35610   aagaatattaccgcggatctattcactatcctatatcttttccgaggattgctcttctccctctcctctgccccggccaccatcgtctcgagagcggctg  8648700  Previous    Next  AGI:  At1g24388.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17700.1) Range:  from: 8648088    to: 8648683    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g24390.1    Description:  unknown protein Range:  from: 8648190    to: 8648984    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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