Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ANAC46                                                         --------->MYB52(1)                                               <----------DOF2                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                           <---------GLK1(2)                                           --------->ARR14(2)                                           <---------ARR14(2)                                           <---------ARR11(3)         <---------ANAC46    =======================HOX2a_HOX2a      <---------MYB52(1)     <------ZmHOX2a(1) ------>ZmHOX2a(1)    <---------YAB1          ---------   --------------->AtSPL8    ======================HOX2a_HOX2a--------->ARR14(2)     <---------MYB52(1) ->ZmHOX2a(2)            --------->TOE1(2) --------->ARR11(3) <---------ARR14(2) <---------At5g28300 -ZmHOX2a(2)           --------->GLK1(2) ----------->ARR10<---------TOE2(3)      ------->TEIL -->ARR11(3)          <---------GLK1(2)---------->DOF2--------->At4g35610       <-----------GT1  ---- ---ARR11(3)      ------>MYB46(1)   --------->AtLEC2  <---------At4g35610    <---------TOE1(2)  <---- --GLK1(1)        ------>MYB83   ----------------->AGL3<---------MYB52(2)   ------>ZmHOX2a(1)--------   ccatctccgttccctatacctacagaatctaggaaaccatgtaaagatcctttctcatctaacgtatactataatttcctatgtaccgtttcgaaccaaa  8640100                                                                         --------->At4g35610                                                                  ------->TEIL         --------->ANAC46                                       --------->TOE1(2)     --------->ARR14(2)                                         <---------SPL7     <---------ARR14(2)                                        --------->HSFB2a(1)    <------ZmHOX2a(1)                                          <---------HSFB2a(1)  <---------TOE2(3)                                  ---------->DOF2     ----------->GT1 >MYB46(3)              <---------AHL20(2)        --------->CCA1(2)    <------ZmHOX2a(1) ----->ATHB12          --------->AHL20(2)        <---------ARR11(3) <-----------RAV1(2) -----ATHB12 <-------TEIL                        --------->ARR11(3) <---------LBD16 ->TOE1(2)--------->AtLEC2             ------>ZmHOX2a(2)      --------------->AtSPL3   gattgaggaaccaggcacatatagatttaatcggagtctgatccaaacagagatataaagagagaacgtaccaggaggtgaagagtttgatgaattgagc  8640200                    --------->ARR14(2)                    <---------ARR14(2)                  --------->LBD16                 <---------ANAC46                <------NtERF2               <---------ERF1               ------>NtERF2               <---------RRTF1(1)               <---------RAP2.3(1)              <---------bZIP60(1)              <---------O2              <---------RAP2.6(2)              <---------RAP2.3(3)              <---------RRTF1(3)              <---------RRTF1(2)              <---------ANAC46              <---------DEAR3(1)              --------->ATERF1(2)              <---------RAP2.3(2)              <---------ATERF1(2)             --------->ATERF1(1)                        --------->ATHB12            --------->MYB52(1)                         --------->ICU4                     --------->ARR14(2)           ----------->TGA1         ----------->GT1    <---------YAB1                     <---------ARR14(2)           ----------->HVH21        <---------ANAC58 --------->YAB1             --------->ALFIN1           --------->ALFIN1  <------ZmHOX2a(1)       <---------ICU4            --------->LBD16          <-----------HVH21 ----------->GT1  ----------->GT1                  <---------ANAC58    ---------->DOF2<------NtERF2    <---------ANAC46<---------ATHB51          <---------ANAC58------>ZmHOX2a(1)  <---------ZAT6<---------LBD16     <---------ANAC58--------->ICU4      <---------ANAC55(2)   =======   gatagtgaaagaggtgacggcggaaatgagaggataattcgtgaaaatggagaaataatgagtggaagacgaagacgtagccgtggctgtagaatcctcc  8640300             ------>ZmHOX2a(2)           --------->ARR11(3)           <---------AGP1           --------->ARR14(2)           <---------ARR14(2)                                              --------->YAB1           ------->TEIL                                                   <---------ATHB12        <---------WOX13(1)                                          --------->ANAC58     <---------ATHB12                             >>>>>>>>>TBF1     --------->ANAC58   <---------At4g35610 <----------DOF2         >>>>>>>>>TBF1  --------->ANAC58 ===================HOX2a_HOX2a         ---------->DOF2       --------->ANAC58------>ZmHOX2a(2)   atggccgatgatggatctagtcaggctttaaatcgtgctagcgaaagaagaagaagaaaatgacaccgaaacgacaatgatccataaaacgtcgactaat  8640400                                                                            *TSS                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                                                        <---------AHL20(1)                                                                 >>>>>>>>>>WRKY62                                                                 >>>>>>>>>>WRKY40                          --------->ETT(2)                       >>>>>>>>>>WRKY18                   --------->ATERF1(1)                           <---------WRKY18(1)                   <------NtERF2                       <------------------------ANAC81                 <---------ANAC58                   <----------DOF2     --------->AHL20(2)                 <---------ANAC58               <----------DOF2 --------->WRKY38(1)         <<<<<<<<<<<<<<<<<LFY                 ---------->ID1    --------->WRKY45              -------         >>>>>>>>>>>>>>>>>LFY             <----------DOF2       --------->WRKY12        --------->ZAT14 <----------DOF2 <---------ANAC46       ------>ZmHOX2a(1)     <----------DOF2           --------->At4g35610   tccctttcaaactccaatggcgtctacgtctaccgttcaatcctctttgtctttctttttttttctttgaccaattttttttttaaacactgctccacaa  8640500                    --------->LBD16                   --------->ANAC58                   --------->ANAC46                   --------->ANAC58           --------->ANAC46                  <---------LBD16          --------->ARR14(2)   <---------AHL20(1)                      <---------ARR14(2)          *TSS   <---------ARR11(3)                 ------->TEIL                   <-----------HVH21   --------->AHL20(1) --------->ARR14(2)  <---------ARR14(1)     --------->TOE1(2)   --------->AHL20(2) <---------ARR14(2)  <---------CCA1(2)      --------->TOE2(2)                --- -->ANAC46------------>CBF           <-----------GT1         --------->ARR14(2)        <<<<<<<<<<GATA-1   aactatatattatacaattacccgcatccgaacaaatatgaaccgtatccgatacaaaacccgaatacctaggtcagttctattcgtgaaatcgagtctc  8640600                                                                                           --------->ATHB51                                                      --------------------->WRI1          <---------YAB1                                             ----------->HVH21                         <---------AHL20(2)                         --------->YAB1    <---------O2                                <---------YAB1              ------>MYB83  --------->YAB1 --------->O2                             --------->AHL20(2)              ------>MYB46(1)              ====================================bZIP_DOF--------->AHL20(2)           ----------->RAV1(2)    <----------DOF2<---------MYB59                    <---------ARR11(3)         ------>NtERF2--------->YAB1       <---------TGA1a          <----------DOF2 --------->AHL20(1)        --------->DEAR3(1)  <---------ICU4 --------->TGA1a<---------MYB52(1)  --------->GLK1(2) --->ZmHOX2a(1)   <---------ALFIN1===================bZIP_DOF       <---------DAG2  <---------AHL20(1)   ctcttattcgacgacctgccccaactataaacatgacttttacacacttgacataacttcgtttgtatcgcttttttgaaattctatatattattattgt  8640700                                                                                                  <--                                                                                                  <--                                                                                             --------                                                           <----------DOF2             <----------DOF2                                                          ------>ZmHOX2a(2)            <---------DAG2                                                          <---------ICU4<------------------SPL14  ---                                                        --------->ARR11(3)       <---------ARR14(2) <                                       <<<<<<<<<TBF1    <---------ARR11(3)   <---------LBD16--------- --------->At4g35610          <-----------GT1 <---------ALFIN1       <-------TEIL<---------GLK1(2)--- <---------At4g35610      <----------DOF2    <---------ZAT14   <---------TOE1(1) --------->ARR14(2)--   ttgagcagaaactaagacaaaattaagacttttctctcttcttcttctccactgggtcgatctttacgaggttcacttgtacggattcactttaacaaca  8640800                       <---------At4g35610                       --------->At4g35610                       <---------ZAT2                       <---------ABI4(2)                       --------->ZAT2                  <------NtERF2                  --------->ATERF1(1)                --------->RAP2.3(2)               --------->ATERF1(1)               <------NtERF2               --------->RRTF1(1)               --------->DEAR4(2)               --------->RAP2.3(1)              ------>NtERF2              --------->ABI4(1)              <---------ATERF1(1)             --------->RAP2.3(2)             --------->RAP2.3(3)             --------->DREB2C(2)             --------->RAP2.6(2)             --------->ATERF1(2)             --------->RRTF1(2)             <---------DEAR3(1)             --------->DEAR3(1)             --------->RRTF1(3)            --------->RAP2.6(1)            --------->DEAR4(2)            <------NtERF2            --------->ERF1            --------->RRTF1(1)            --------->ATERF1(1)           <---------RAP2.3(1)           --------->At4g35610           <---------ATERF1(1)           <---------DEAR4(2)           --------->ATERF1(1)           --------->DREB2C(1)           <---------DREB2C(1)           ------>NtERF2           <------NtERF2<---------ALFIN1           <---------At4g35610          <---------DEAR3(1)                                                ------>ZmHOX2a(2)          --------->DEAR3(1)                                          <---------MYB52(1)          <---------ATERF1(2)                                        --------->LBD16          --------->RAP2.6(2)                                       <---------ANAC55(1)          --------->ATERF1(2)                                       <---------ANAC46         <---------RAP2.6(2)                                        --------->ANAC55(2) --------->ANAC58<-----------HVH21                            <------MYB46(1)      --------->ARR14(2) --------->ANAC58<---------ATERF1(1)                      <---------ZAT2   <---------GLK1(1) -------ARR14(2)<---------O2                         <---------HSFB2a(2)   <------ZmHOX2a(2) -------GLK1(2)--------->ERF1                        --------->HSFB2a(2)   --------->GLK1(1) --->RAV1(1)--------->ORA47(2)                     <------NtERF2<---------GLK1(1)  <---------ARR14(2) ------>ARR14(2)--------->O2                      <-----------HVH21 <---------ANAC58 -------TEIL--------->RAP2.3(1)                   <---------RAP2.6(3)<-----------HVH21              - >MYB46(3)--------->ANAC46 --------->DEAR3(1)    --------->DEAR3(1) <---------ANAC58  <---------ETT(1) ------>ARR11(1)--------->DEAR3(1)          ---------->DOF2   <------MYB83<---------ARR11(3)       <- ------->ARR14(1)------>NtERF2      <---------At4g35610   --------->ZAT2  --------->ARR11(3)      <--   gattcgccatggccgccgccgtcgcagcaccgagactcatctccttgaaagccgtcgcgaagctaggtttccgtgagatctctcaaatccgacaattggc  8640900                                                   --------->At4g35610                                                   <------NtERF2                                                   <---------At4g35610                                                 --------->ATERF1(1)                                                 <-----------RAV1(2)                                                --------->At4g35610                                                --------->ATERF1(1)                                                <------NtERF2                                                <---------At4g35610                                              <---------RAP2.6(2)                                             <---------LBD16                                            ------>ZmHOX2a(2)                    ------>ZmHOX2a(1)   --------->ZAT14                        <---------ARR14(2)               <---------ICU4 -------->At4g35610                       --------->ARR11(3)          <---------KAN4(2)           <-- --------ALFIN1                --------->TOE1(2)<---------ATERF1(1)----------->GT1               <--- ----NtERF2      --------->TOE2(3)   <---------REM1(1) <---------MYB52(1) <-------TEIL        <------   tccgcttcactctgcgatacctcatttcggaatgctgcgatgtagatcgcggcagccgttttctacctctggtatattcattcctcttctctcttccttt  8641000  Previous    Next  AGI:  At1g24350.1    Description:  catalytic. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46666.1); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326) Range:  from: 8638509    to: 8640476    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g24360.1    Description:  3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase. Identical to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast precursor [Arabidopsis Thaliana] (GB:P33207;GB:O04463;GB:Q9FPJ6); similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29370.1); similar to 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) (GB:Q93X62); contains InterPro domain 3-oxoacyl-(acyl-carrier-protein) reductase; (InterPro:IPR011284); contains InterPro dom Range:  from: 8640571    to: 8643467    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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