Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->At4g35610        <---------At4g35610                                                         ---------->DOF2        ----------->RAV1(2)                                                       <-------TEIL     <---------MYB52(1)                                                          --------->CCA1(2)    <-------GAMYB                                                     --------->GLK1(1) -->GAMYB              --------->At4g35610                           <---------ARR11(3) --->ANAC58            <---------At4g35610                           --------->ARR11(3) --->ANAC58        --------->ARR14(2)                        --------->GLK1(1)  --------->ARR14(2) ->MYB52(1)   ------>NtERF2                 ----------->GT1  <---------GLK1(1)  <---------ARR14(2)   gaatgctgttatctgaggccaattctgcagaatagcataaacaaggtagtcaataggtgaaggaaatcagagatatcaaacagatacaaagtaagaaaac  8620000                                            ---------->DOF2                  <---------CCA1(2)                                         ------>ZmHOX2a(2)                 <---------ANAC58                                        <------ZmHOX2a(2)                  <---------ANAC58                    <---------ICU4     --------->ARR14(2)                  <---------ANAC55(2)                   --------->ICU4      <---------ARR11(3)                  --------->ANAC55(2)                   <---------ATHB12    <---------ARR14(2)              <---------GLK1(1)            <                   <---------YAB1   <---------HSFB2a(2)         ---------->DOF2                     <        <-------TEIL--------->ATHB12--------->HSFB2a(2) --------->YAB1 --------->GLK1(1)     --------   cactagtagatgcacaaactaatcattcgttcttaattccagatcccaaagtatagaataagaaacaaaagagaattccgtctctcgtattaatccaaca  8620100                ---------->DOF2 --------->HSFC1(2)             ----------->GT1                                  <------MYB46(1) --------->HSFB2a(1)  ------>NtERF2      <---------YAB1                          ----------->GT1 <---------HSFC1(2)--------->At4g35610 ---------->DOF2                           <------MYB83 ---------TOE1(3)  <---------At4g35610 --------->YAB1                   --------->ZAT6      --------- ---------TOE2(3)  <---------------------WRI1                  --------->TOE1(3)--------->MYB46(2) --->RAV1(1)------->TEIL       <---------TOE2(3)               --------->TOE2(3)--------->MYB59   tgaaggttctaatgcatcgaaagcggacataacaaggttaataaagatagattgaattcgtagaaccctaaataacacaagttaggtcaaaattcaaagc  8620200                                 --------->LBD16            --------->bZIP60(2) <---------HSFB2a(2)           --------->LBD16      --------->HSFB2a(2)                --------->YAB1           ------>NtERF2      <------ZmHOX2a(2)                   <---------ATHB12          --------->RAP2.6(2)--------->ARR11(3)                  --------->ANAC58         --------->RAP2.3(1) --------->ARR14(2)                  --------->ANAC58        <---------ATERF1(1)  <---------ARR14(2)                 --------->WOX13(1)        ------>NtERF2  <---------GLK1(1)                     --------->ANAC58        <---------At4g35610  --------->AGP1                  --------->ANAC58      <---------RAP2.6(2)   <---------At4g35610              --------->ANAC46                    ---- ->DOF2 --------->At4g35610 --------->At4g35610             <---------LBD16           ----------->GT1   tatacatggctgccgcatcatatggaattcagatccagaaactaaacgattacatttgtttctacgcaatcaaatcgatcgagagagaaggaaattcaaa  8620300                                                                                      ===============                                                                          <------ZmHOX2a(2)                                                                         --------->ARR11(3)                                                                       ----------->ARR10   --------->HSFB2a(1)                                                                   ==========================HOX2a_HOX2a                                                                   ==============HOX2a_HOX2a                                                                   ===============HOX2a_HOX2a                                             <---------At4g35610   <------ZmHOX2a(1)  <------ZmHOX2a(2)                                     ------->TEIL         --------->CCA1(2)          <---------ARR14(2)                                 --------------->AtSPL8  --------->ARR11(3)          --------->ARR14(2)                                 <---------------AtSPL3  --------->ARR11(1)     --------->AtLEC2                                 --------------->AtSPL3  <---------ARR14(2)   <-----------RAV1(2)                                 <---------------AtSPL8  --------->ARR14(2) <-----------HVH21  ---------->DOF2               ---------->DOF2          <---------ARR11(3)------>ZmHOX2a(2) ----->GLK1(1)                 <------ZmHOX2a(1)       ----------->ARR10 <---------ARR11(3)<---------HSFB2a(1)   tatccaaagacagaaacaagtcgaagattgagaggaaagtacctttcaactgatcagaagatttggaaaggatgagatcgtcaggcagatcgaacttccc  8620400                                      <---------ANAC58                                      <---------ANAC58                       ------->GAMYB  --------->ANAC55(2)                    --------->MYB52(1)<---------ANAC46                           --------->ANAC58   -            <------------CBF          <---------ANAC55(2)     ----------->HVH21  --------->ANAC58<---           <------ZmHOX2a(1)          <---------ANAC55(1)  --------->TOE1(2) >>>>>>>>>TBF1    ------- ------>NtERF2----------->GT1  <---------HSFB2a(2) <----------ID1  --------->ZAT18     --------->DAG2 =================HOX2a_HOX2a  --------->HSFB2a(2)<------ZmHOX2a(1)<---------ZAT14    ---------->DOF2   ttcggccatggcaggattgaaacaacgggacttcgagattacgtatgaagaaggagacgaacgagcgaccgcagtagaagaagaagcaaaaagtagatag  8620500                               <---------DAG2                        <------NtERF2                       --------->LBD16                      <---------ANAC46                                       <---------ANAC46 --------->DOF2      <---------LBD16                                       <---------ANAC46      ---- ---ZmHOX2a(1)   --------->CCA1(2)    <---------TOE1(2) <----------DOF2 <----------DOF2          ---- -->CCA1(2)   ----------->ARR10<----------DOF2      <-----------GT1---------->DOF2   <------ZmHOX2a(2)   gagaaagggttttggagagatttggcggagaaactttttgcaggttttcgatttttgcctttggagaagaaaagctttcgcgttgagatcgagagagaga  8620600                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                             <---------AHL20(1)                                                                         <------------------------ANAC81                              --------->DAG2                            <---------MYB52(1)                            ---------->DOF2                       <---------YAB1                       ---------->DOF2                          <---------ICU4                     <------NtERF2                              --------->YAB1                    ------>NtERF2                           <---------AHL20(2)                     <-                    ----------->RAV1(1)  <------ZmHOX2a(1)  --------->AHL20(1)              <-------- ----->CCA1(2)     ----------->HVH21  <------ZmHOX2a(1)     --------->AHL20(2) <------------CBF    <- ----->At4g35610   <----------ID1   <---------TOE2(3)      --------->AHL20(2)--------->AHL20(1)<-----   gatgaattagtgagtgaatgggcgacaaaggaaaggctaaggaggacttcgccaaaaaaaaaaaaattatcactgttattttattgttttgtattttaag  8620700                       --------->ARR11(3)                                                   <--------                       ------->TEIL<---------AHL20(2)                                      <---------AHL20(1)  <---------YAB1       --------->ARR14(2)                                   --------->AHL20(2) <------------CBF      <---------ARR14(2)                       --------->YAB1 --------->ARR11(3) --------AHL20(2)     <---------CCA1(2)         --------->AHL20(2)          <---------AHL20(2) -AHL20(2)          --------->ANAC55(2)    <---------YAB1      <---------YAB1 <---------CCA1(2) --------YAB1       <---------ANAC55(2) <---------YAB1         <---------ATHB51<---------ARR11(3)  << ----TOE2(3)   ----------->HVH21  --------->AHL20(2)--------->AHL20(2) <---------YAB1      --------->AHL20(1)   ttttattgttgaaacctctgatatgtatcttcaagattaaatatgatgaattaaaaatataaacaattatagtatcatttatatctcatgttatatattt  8620800                                                             <---------AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                         <---------AHL20(1)                                                         --------->AHL20(1)                                                        --------->AHL20(2)                                              <---------AHL20(2)                                             <---------ARR11(3)              <---------DAG2                                             --------->ARR11(3)    --------->ARR11(3)                                             <---------AHL20(2)    --------->GLK1(2)           ------                                  --------->ARR11(3)    <---------AHL20(2)   --------------->AGL15                                  <---------ARR11(3)  --------->YAB1         <---------------AGL15                              --------->AHL20(2)  --------->AHL20(2)         <----------DOF2   ------      <---------ARR11(3)      <---------AHL20(2)  <---------AHL20(2)--------->RVE1(1)          <-----      --------->ARR11(3)<------MYB46(1)      <---------AHL20(1)    <---------ARR11(3)         -------   <------ZmHOX2a(1)    <------MYB83         --------->AHL20(1)   --------->RVE1(1) --------->LBD16 -AHL20(2)<-------TEIL <---------TOE1(2)     --------->AHL20(2)   --------->CCA1(1)<---------LBD16 <<<<<<<MYB98     <---------GLK1(2)     --------->AHL20(2)   --------->AHL20(2)   <---------LBD16   tgttaggatatattcatacagattgtaggtatttaaaatctttttaatatatttaaaaataaattaaaaaatctcttaactttatcggggaaacaaatat  8620900  Previous    Next  AGI:  At1g24300.1    Description:  GYF domain-containing protein. similar to GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G27430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49048.1); contains InterPro domain GYF (InterPro:IPR003169) Range:  from: 8614354    to: 8620409    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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