Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ARR14(2)                         --------->MYB52(1)                         --------->ARR14(2)                        <------NtERF2                        <---------SPL7                                  --------->TGA2(2)                    ------>NtERF2                                      <-----------HVH21                    <---------ATERF1(1)                                <-----------TGA1                    <---------RAP2.3(1)                               --------->bZIP60(2)       -----                   <---------RAP2.3(2)                                --------->ANAC46         ------                   <---------DEAR3(1)                                <-----------STF1        --------                ----------->HVH21                                 ------>MYB83            --------->ANAC58             <---------ARR14(2)       --------->At4g35610         ------>MYB46(1)         --------->ANAC58             --------->ARR14(2) <------ZmHOX2a(1) <------ZmHOX2a(1)--------->REM1(1)    <------ZmHOX2a(1)        <-------GAMYB<------NtERF2    <---------At4g35610         -------->P      --------->ALFIN1     <------NtERF2 <---------RAP2.3(3)<---------ZAT2         <---------WRKY18(1)<---------ANAC58-----   <---------DEAR3(1)<---------LBD16  --------->ZAT2    --------->ARR11(3)      <---------ANAC58-----   gaagggaggcgattggattcgacggcggaacggaggagagagctgggagagaggagatggtcttgacctacaacgtcatctagagtgcgaggacgcatac  8613900                         <------NtERF2                        --------->MYB55(2)                        <---------MYB46(3)                       --------->ALFIN1                                 =============================                       <---------DEAR3(1)                               <---------ANAC46                      <------NtERF2                                     <---------bZIP60(2)                      --------->ATERF1(1)                               --------->TGA1a                      <-------GAMYB                                     <---------O2                     <---------MYB46(3)                                 --------->O2                     <---------RAP2.3(1)                                <---------TGA1a                    <---------DREB2C(2)                                 =============================                    <---------ANAC46                                  ------>NtERF2                    <---------DEAR3(1)                              --------->LBD16              <-----------RAV1(1)                                   ------>NtERF2          <---------ANAC58<---------ANAC58                         --------->ANAC46                 <          <---------ANAC46<---------ANAC46                         --------->RAP2.6(2)              <  ------>NtERF2     <---------RAP2.6(2)                          --------->ZAT2                     <  ----------->RAV1(1)<---------ATERF1(1)           <---------MYB46(3)----------->HVH21              - ----------->HVH21 <------NtERF2                  ================================bZIP_DOF         <- <---------ETT(1)<---------DEAR3(1)         ----------->HVH21    <---------At4g35610               <- ---->ANAC46  --------->ALFIN1          <---------ANAC58       --------->MYB46(3)                 <-- --->SPL7 <---------ANAC58<---------ANAC58  ----------->TGA1  --------->At4g35610                ---- ->ARR14(2)<---------MYB46(3)           <---------ANAC58    --------->YAB1   <---------ARR14(2)  <--- ---->ANAC58<------MYB83------>NtERF2 --------->ARR11(3)   --------->ICU4    --------->ARR14(2)<----- ---->ANAC58<------MYB46(1)       <---------YAB1  <----------DOF2--------->At4g35610         --------   gctccgacaatggctggtgttggcggtggctggatgatgagagcttgtgacgcttgttggaatcatcagccgcgacgtggatttgggttttgggattggg  8614000                                                                                         >>>>>>>>>GATA-2                           ------>NtERF2                                                 >>>>>>>>>GATA-1                          <---------DEAR3(1)                                             >>>>>>>>>GATA-3    <---------ANAC46      <---------PCF2                                            <---------ANAC58 <----------DOF2         <------NtERF2                                              <---------ANAC46 =======MYC_MYB         <---------MYB46(3)                                          <---------ANAC58 ===========bZIP_DOF    --------->LBD16                                         --------->ALFIN1 ---------ANAC58        <---------ATERF1(1)                                   <---------TGA1a ---------ANAC58        <---------RAP2.3(1)                                   <---------bZIP60(2) -------GAMYB          <---------ANAC58                                       <---------ANAC46 -------->ATERF1(1)    <---------ANAC46                                       --------->O2 --------MYB46(3)      <---------DEAR3(1)                                     <---------ANAC58 --------ATERF1(1)     <---------ANAC58                                       <---------ANAC58 -------DEAR3(1)      <---------LBD16                                      ----------->HVH21 ----->ZAT18<-----------TGA1                                             ===============bZIP_DOF ------ZAT18<-----------HVH21       <----------DOF2      --------->At4g35610  <---------O2 ----RAP2.3(3)      ----------->HVH21                    <---------At4g35610  --------->TGA1a<------- ->ALFIN1  --------->YAB1--------->ATERF1(1)          <------ZmHOX2a(1)  <----------DOF2 >>>>>>>>>GATA-4   gcgcttgctggaatcgtcacccatggcgggggctagggctttgggatggagacggaggaagcggtcgagtttgggctgtaacgtggccgtggattgaggg  8614100                                                          <---------MYB52(1)                                                          --------->DOF5.7(2)                                                         <-------GAMYB  <------NtERF2                                                        <---------MYB46(3)                                                      <------NtERF2     ------>NtERF2                                                   <---------MYB52(1)  --------->RAP2.6(2)                             <----------DOF2      <---------ATERF1(1)  <---------ATERF1(1)                            <---------ANAC58      <---------DEAR3(2)   ------>NtERF2                            <---------ANAC58     <---------ATERF1(2)  --------->ATERF1(2)                        <-------GAMYB            <---------DEAR3(1)   --------->DEAR3(1)                        <---------MYB52(1)       --------->ATERF1(2)  <---------DEAR3(1)                       <---------DEAR3(2)      ------>NtERF2          <---------RAP2.6(2)                       <------MYB83<---------AtLEC2--------->ATERF1(1)<---------ATERF1(2)                       <------MYB46(1)        --------->DEAR3(1)     --------->ATERF1(1)                      --------->MYB55(2)      --------->ANAC46       --------->At4g35610                      <---------DEAR3(1)     <---------LBD16<---------DOF5.7(2)               --------->ARR14(2)<---------HSFB2a(2) ------>NtERF2   <---------At4g35610               --------->GLK1(2)<---------LBD16--------->LBD16       <------NtERF2       --------->MYB55(2)  <------NtERF2  --------->HSFB2a(1)      ---------->CDC5       <---------MYB46(3) ------>NtERF2   <---------HSFC1(2)---------->DOF2      --------->ALFIN1<---------MYB46(3)<---------GLK1(2)--------->At5g28300 --------->MYB52(1)   <---------DREB2C(2) <---------HSFB2a(1)      <---------DEAR3(1)            ---- --ANAC46      <---------ARR14(2)--------->HSFB2a(2)--------->ALFIN1<---------ATERF1(1) --------->GLK1(1)   gaagaacggtgggagagaatccagtcggtggctttctggatggaatctccgccggtggccgttaaagcctcggcggccaaatcgctggagaaacccatgc  8614200                                          <---------At4g35610                                       ---------->DOF2      --------->At4g35610             --------->AtMYB61                 --------->WRKY38(1)  --------   <---------At4g35610             <----------ID1                 *TSS<------------CBF       <-------   --------->At4g35610    ----------->GT1 --------->At4g35610 <---------ANAC58            ---------->ID1 ----->ZAT18              <---------ZAT6  --------->ZAT2      <---------ANAC58   <----------DOF2 ----   tcactagctgctccatcttctacttctactgtgaaaaacaccaaagctgtcttagttagcaatagcatgctccattgactaaactttgttttgtcatctt  8614300                    ----------->GT1                   --------->YAB1             --------->ANAC55(2)        --------->TOE1(3)        --------->TOE2(3)   ----------->GT1                                  <---------AHL20(2) ->At4g35610 --------->ANAC46                                     ------------>CBF --At4g35610 --------->ANAC58                            --------->At4g35610 --------->AHL20(2) ------>DOF2 --------->ANAC58  <-----------GT1           <---------At4g35610 <---------AHL20(1) -----   aaagataaaaccttcaagtaataagaaaaaatgtaacattacgaactagaccatttctgagctaaaaaaccaatttcattttatttctgtgttccgatgt  8614400      --------->CCA1(2)                                                    --------->ARR11(3)      --     --------->ARR11(1)                                                    <---------ARR11(3)     ---     <---------ARR11(3)                --------->ANAC46                  --------->ICU4 <----------ID1     <---------ARR14(2)                --------->ANAC58       <----------DOF2           ----------->GT1     --------->ARR14(2)             <---------ARR14(2)       <---------ICU4<---------GLK1(2)  -------     --------->ARR11(3)             --------->ARR14(2)--------->GLK1(2)---------->DOF2---------->DOF2 ------>HVH21           ----------->GT1--------->ANAC58    --------->GLK1(2)  <---------------AtSPL8   gatggaagatatgtataatcttctgtctgtaaaaaacctatacgcctaagcttgagaagctaatctttacatgtaaagattttgtacaaaaagaaaaaaa  8614500                        ------>ZmHOX2a(2)                       <---------GLK1(1)                      <---------AGP1                      <---------ARR14(2)                      <---------ARR11(3)                      --------->ARR11(3)                      <-----------ARR10                     <---------CCA1(2)                    <---------MYB46(3)                                        ------>ZmHOX2a(2)                   --------->ALFIN1                                         <---------ARR14(2)                  --------->At5g28300                                       --------->ARR14(2)           <---------ICU4                                                 ------>ZmHOX2a(2)        --------->YAB1--------->ARR14(2)           <----------DOF2 --------->ZAT2 --------->GT1  <---------DEAR3(1)         <---------ANAC58        --------->At4g35610 -------->GT1--------->ZAT2                <---------ANAC58       --------->ARR11(3)   <----------DOF2 --->DOF2 --------->At4g35610    ---------->DOF2 <-----------------------TaNAC69(2)------>NtERF2<----   gagttaaaaatcatcagcacggtggatctcgcccataatgcgattgctagtgactttgaaaccaagaagagctggatcgatctgcctccctttcttccct  8614600                                                    --------->ATERF1(1)                                                    <------NtERF2                                                   ------>NtERF2                 <----------DOF2                  --------->ATERF1(2)             <---------ALFIN1                     --------->RAP2.3(3)             --------->DEAR3(1)                   --------->RAP2.6(2)             --------->AtMYB61                    --------->ANAC46            --------->MYB46(3)                    <---------ATERF1(2)           <---------ATERF1(1)                    --------->DEAR3(1)          <---------ALFIN1                        --------->RAP2.3(2)          --------->DEAR3(1)                     --------->RAP2.3(1)        --------->LBD16                         ------>NtERF2        ------>NtERF2<---------ANAC58           --------->At4g35610        <---------ATERF1(1)                     <---------ATERF1(1)       --------->ANAC46                         <---------At4g35610       --------->ANAC58           --------->REM1(1)<---------ATERF1(1)       --------->ANAC58           <---------bZIP60(1) ------>NtERF2                                <-      <---------LBD16<---------ANAC58--------->ATHB12<---------ALFIN1                       --------- <<<<<<<<<TBF1  <---------DAG2    --------->bZIP60(1)--------->DEAR3(1)              --------->At4g35610 ------DOF2------>NtERF2          <---------TGA2(1)<---------RAP2.6(3)              <---------ARR11(3)   ttcttcttcccgccaccacctttgcttccttctgttacatcatttgactctgccgccaccttcttcatgctattactcttcttcaacatctcactgaacg  8614700              <---------WRKY18(1)             --------->WRKY12             --------->WRKY38(1)                                  <---------AHL20(2)             --------->WRKY45                                    <---------ARR11(3)            --------->DOF5.7(2)      ------>ZmHOX2a(1)           --------->AHL20(1)          <---------bZIP60(2)   <---------At4g35610              --------->ARR11(3)          <---------ANAC46      <---------ZAT2                   <---------AHL20(2)         <---------TOE2(3)     <---------ATERF1(1)               --------->AHL20(2)       ----------->HVH21     <---------At4g35610       ------>NtERF2     --------->At4g35610     --------->LBD16       <---------ALFIN1     <---------At4g35610    --------->ANAC46    ----------->HVH21<---------AHL20(1)   <------NtERF2           <---------LBD16  --------->ANAC46  --------->AHL20(2)  ------>NtERF2    <---------MYB52(1)<---------YAB1--------->ANAC46     <---------ANAC58 ----------HVH21   <----------DOF2 ----------->RAV1(2)--------->DEAR3(1)<---------ANAC58 >ZAT14----------->TGA1 <-----------GT1<---------GLK1(2)----------->RAV1(2)   atgtcgcctctgacgttgaccctttgtttcccgctgctcctgattcccgtctcacaccgcctgataatatatttgcttacagacttgagtcacattttcc  8614800  Previous    Next  AGI:  At1g24290.1    Description:  AAA-type ATPase family protein. similar to replication factor C 36 kDA, putative [Arabidopsis thaliana] (TAIR:AT1G77470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48909.1); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449) Range:  from: 8612494    to: 8614266    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g24300.1    Description:  GYF domain-containing protein. similar to GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G27430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49048.1); contains InterPro domain GYF (InterPro:IPR003169) Range:  from: 8614354    to: 8620409    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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