Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <------MYB46(1)                                                       <---------AHL20(2)           --------->AHL20(2)                        <----------DOF2       --------->AHL20(2)                           <-----------------AGL3       <---------AHL20(2)                           ------>ZmHOX2a(2)      <---------AHL20(2)                          --------->ARR11(3) ---------->GT1                               --------->ANAC55(2) -------->ANAC55(2)                           <---------ANAC58 ---------ANAC55(2)                         <-----------GT1 <------MYB83 ------TEIL<---------AHL20(2)  ---------->ID1 <---------ANAC58 ---AHL20(2)       <------ZmHOX2a(1)        <---------AHL20(2)                                  ----- -->AHL20(2)     <---------TOE2(3)<---------YAB1  <---------ARR11(3)                 <---------ANAC46   attcgtaatttatataatttaggaaacatatttgttgtcattagatttacttgatctttatttggtttgctctgtttctctctgttttcgtctatacgtt  8585900                                                                                       <---------HSFB2a(2)                                                                                    --------->ANAC58                                                                                    --------->ANAC58                         --------->ZAT6                                          <-------TEIL    ----                     <---------ANAC58                                            ------->TEIL>>>>>>>>                 <---------ANAC58                                            --------------->AtSPL8                 <---------ANAC58                                            <---------------AtSPL8      <----------DOF2<---------ANAC58                                   --------->YAB1--------------- ---->WRKY12<----------DOF2                         <---------ICU4   --------->YAB1 --------->ANAC46   gaactctgctttgacttttgagtgcttacactctcgcctctcggtttctaacaaatatgaccccaaaccaaaaatcatatatgtacatgccagaagaaga  8586000                         --------->CCA1(2)                        <---------AHL20(2)                        <---------AHL20(1)         --------->TOE2(3)                         <-------                        --------->AHL20(1)      <-----------GT1               <---------TOE1(3) ----->GLK1(2)       --------->YAB1         <---------DAG2                    <---------TOE2(3) >TBF1               --------->AHL20(2)     <----------DOF2             <---------YAB1      <-------- -->AGL1    <---------CCA1(2)           <---------ATHB12                <---------TOE2(3)   ---------   atcgacctgaattcaaatctctataatatatgaaacaatacaatcacttttcacctcaatgttttttttttgttaacattgaggttttcatatgaggtca  8586100                             --------->ATHB12                            <---------YAB1                        <---------GLK1(2)                      <---------TOE2(3)                  <---------YAB1                 --------->AHL20(1)                                <---------AtLEC2 ----HVH21      --------->ATHB51                                  <-------TEIL --------->YAB1 -bZIP60(1)     --------->AHL20(2)   <---------AtLEC2  <---------AHL20(2)     --------->ICU4 >bZIP60(1)     <---------AHL20(2)  <---------REM1(2)  <---------YAB1   ------->TEIL --------------->AtSPL8   tatcgattttgttttgaattattttagattatgatttctacatggatagacaagagttttattgtaagtgcatgtatgtaatgatgttctgttctctata  8586200                 --------------->AGL15             <---------ZAT14             --------->ZAT14           --------->ANAC46                                                              <---------ARR14(2)         --------->ZAT6          <---------ARR11(3)                                      --------->ARR14(2)    <---------ICU4               --------->ARR11(3)                 --------->ANAC58    ----------->TBP    --------->YAB1     <---------HSFB2a(2)       ---------->DOF2    --------->ANAC58   ----------->ARR10  --------->ANAC58     --------->HSFB2a(2)   ---------->DOF2      ---------->DOF2   ----------->GT1  --------->ANAC58 <----------DOF2 <-----------HVH21      ------->TEIL          <-----------RAV1(2) --------->YAB1  <---------------AGL15---------->DOF2<------ZmHOX2a(1)       --------->RVE1(1)     <-   caataagcatcacactaaactctttctagcaagaagatgtcaaagaaaaaagaaaggatgtatttgataaaagcaaaaaatatcaggggtatatatgcaa  8586300                                                                       <----------DOF2                                                                  ---------->DOF2                                   --------->YAB1               ----------->HVH21                                  ----------->HVH21         --------->RVE1(1)                      --------->TOE1(3)                    --------->ARR11(3)                     ----------->RAV1(2)  *TSS             --------->GLK1(2)            ------>ZmHOX2a(2)           --------->YAB1   <------ZmHOX2a(1)              <---------ARR11(3)       <---------YAB1 ----------GT1---------->DOF2 ------------>CBF            <---------GLK1(2)   <---------GLK1(1)   attaccaaaacaaaaataaagaaacctgaaggagcaatgacaagggatttgtttttctcaaaatctctgaaagcttttggatatttgtgatcgcatagat  8586400            ----------->ARR10          --------->LBD16        --------------->AtSPL3         <---------ANAC46      ------------------>SPL14                                         -----        <---------LBD16     <---------ANAC58  <---------ANAC58             <---------ALFIN1     <----    <----------DOF2         <---------ANAC58  <---------ANAC58 <-----------GT1      <----------DOF2  ----------------->AGL1--------->ATHB12   <--------P    <------NtERF2   ----------->RAV1(1)  <<<<<<<   cgattccttttgcggagaaatgcaattgattcgtggcagtacaaggttgcttcagaggcatcgtttctccatctccaacactcttcctttcacttcttct  8586500               <---------At4g35610                                                                  <               --------->At4g35610                                       <---------ARR11(3)        <-       <---------ZAT2                                                    --------->ARR11(3)        --       --------->At4g35610                                              <---------CCA1(2)         <--       --------->ZAT2                                               ----------->RAV1(1)           ---  --------->HSFB2a(2)                                              ----------->HVH21              <--  <---------HSFB2a(2)           <---------ZAT2                 --------->At4g35610               <--- ---------->AGL15      ------->TEIL                            <---------At4g35610               ---- -----------AGL15   <---------ATHB12   <----------DOF2         <---------ZAT2                   ----- <<TBF1<---------At4g35610   <------ZmHOX2a(1) <----------DOF2 --------->ZAT2         <-------GAMYB--   tcttgtggaagctggtctgctaatgaatcgaggaagctaggctttgattctttccctagtactagagctgcgacatatctcattagctcgttgaaaaatg  8586600          <----------DOF2        ------>ZmHOX2a(1)     <-----------------AGL1     ---------->ID1  <---------DAG2  <----------DOF2 ------NtERF2 --------RAP2.6(3) ------->LBD16                                                                        --------->HSFB2a(2) -------ATERF1(2)                                                                <---------ARR14(2) ------>ATERF1(2)                                           >>>>>>>>>ARR2 <---------ANAC58 -------RAP2.6(2)                                           >>>>>>>>>ARR1 <---------ANAC58 ------LBD16                            ------>ZmHOX2a(1) <---------YAB1  <---------ANAC46 ----->RAP2.6(3)             --------->ANAC58             <---------TOE2(3)      --------->ARR14(2) ---->MYB52(1)               --------->ANAC46             <---------TOE1(3) <---------ANAC46 ---->NtERF2                 --------->ANAC58    <----------DOF2     <-----------GT1  <---------HSFB2a(2)   ccggcttttcctctttggcagtagtacctgtaagccattgtccttctctgtctttggtttaagattgttttttacttcgtgtggatttgtagaaatgtag  8586700                      <------ZmHOX2a(2)                     --------->AGP1           <------MYB83           <------MYB46(1)          --------->MYB46(2)                                                             <------MYB46(1)          --------->MYB111(2)                                                            <------MYB83          <---------MYB46(3)                                                            <---------AtMYB61          --------->MYB111(1)                                                           <---------MYB46(3)         <---------MYB55(1)                                                            <--------P         <--------P <---------GLK1(1)                                                 <-------GAMYB        <-------GAMYB--------->ARR11(3)                                          ------>ZmHOX2a(2)       <---------MYB46(3)                                ----------->GT1       --------->ARR11(3)      <---------AtMYB61------>ZmHOX2a(2)              <------ZmHOX2a(1)        <---------ARR11(3)   <---------ARR14(2)<---------ARR11(3)               ==================================HOX2a_HOX2a   acgaggttttggttggtaatagagatcttatgtctaaattggtttgaaaattgctaggaatgtaagaaaaacgaaaactttgatcttgggttggtctcgc  8586800  Previous    Next  AGI:  At1g24240.1    Description:  ribosomal protein L19 family protein. similar to ribosomal protein L19 family protein [Arabidopsis thaliana] (TAIR:AT4G11630.1); similar to putative L19 ribosomal protein [Solanum lycopersicum] (GB:ABC26877.1); contains InterPro domain Ribosomal protein L19; (InterPro:IPR001857) Range:  from: 8586342    to: 8588105    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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