Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ALFIN1                          ------->MYC3                         --------->TGA1a                         <---------TGA1a                         ===============MYC_MYB                    <---------ZAT14                                                            ------                    --------->ZAT14                                                            ------                    <---------ZAT18                                                            ------                  --------->At4g35610                                              --------->AHL20(2)                  <---------At4g35610                  <------ZmHOX2a(1)     ----------->GT1 --------               <---------ZAT14              --------->At4g35610            ----------->GT1   --------               --------->ZAT14  <-------GAMYB      --------->ICU4  --------->YAB1  <---------AHL20(2)         --------->GLK1(2)<-------MYC3      <---------At4g35610--------->AHL20(2)  <---------ATHB51--   agtaacatcagaatcagttcagttcacatgtgtgtgttgttttgtaagcagaaattaggagaaaatcaaatataacatggagaaaataattcatacctac  8584700                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 <---------ARR14(2)                 <---------ARR14(3)                        <---------ICU4                 --------->ARR11(3)                        --------->ATHB12         <---------ICU4                                   <---------ATHB12        --------->ICU4                                    --------->ICU4        <---------ATHB12  --------->GLK1(2)          --------->ANAC58      --------->YAB1  <---------HSFB2a(2)            --------->ANAC46 --->MYB52(1)    --------->ARR14(3)                  <---------ANAC55(2) >MYB83 <---------YAB1--------->HSFB2a(2)            --------->ANAC55(2) >MYB46(1)       <---------AGP1                      --------->ANAC58                    <-------TEIL ->TOE1(2)       --------->ARR14(2)            <-------TEIL-------->HAHB4                ------->TEIL ->TOE2(2)--------->WOX13(1)               <---------TOE1(2)        ---------->DOF2  --------------->AtSPL3 ------->ZAT18   <---------ARR11(3) <---------ARR14(2)    <---------YAB1             ------->TEIL   gggcgctataatcattcaagatctcgagaaactgagcatattttgcaggttcatcacgaaatgattccttcaaagaatagatgtatgaacgtacatcatg  8584800                                                            <----------DOF2                                                            ----------------------->TaNAC69(2)                                                           ------>ZmHOX2a(2)                                                         --------->ARR11(3)                                                         <---------ARR11(3)                                                      ------->MYC3                                                      <-------MYC3                                                     --------->ANAC55(2)                                                     --------->ANAC46                                                     <---------ANAC55(2)                                                     --------->O2                                                     <---------TGA1a                                                     ================================================MYC_MYB                --------->At4g35610                  ==================bZIP_DOF                --------->ZAT2                       --------->TGA1a                <---------At4g35610                  <---------O2         --------->LBD16                <---------ZAT2                     <-----------GT1       --------->ANAC58     -------                ----------->RAV1(2)               <-------TEIL           --------->ANAC58     <------              <-----------RAV1(2)                --------->CCA1(2)       --------->ANAC46   <--------P       ------>ZmHOX2a(1)                        <---------ARR14(2)      <---------LBD16    <---------MYB52(1)      --------->TOE1(3)                         --------->ARR14(2)  <---------GLK1(1)      --------->At5g28300      --------->TOE2(3)                         <---------GLK1(2)   --------->GLK1(1)     <---------DEAR3(2)   aaatgtttccttagcctcagctggaaggaaggcattgaaacgaagtagcagattcacgtgatctttcaagagttcccgcatccttggaacgacggtagct  8584900                                                  <---------ZAT14                                              <-------MYC3                   --------->YAB1             ------->MYC3          ===========================================bZIP_DOF          ---------->DOF2                  <---------TGA1a        <---------REM1(2)                  --------->TGA1a               --------->YAB1       --------------->AGL15            ----------->HVH21               <---------ATHB12 -->At4g35610 <----------ID1      --------->WOX13(1)                   ------>MYB83 ---At4g35610 ----------->GT1  --------->GLK1(2)--------->REM1(2)      ------>MYB46(1)            ---   aaatcgactctacaaagagaaaaataacatgagaatcaatctctcacatgtgtagactgtttaagagcaaaccaaacatacctattagctcttaaatcca  8585000                                                                                 --------->REM1(1)                                                                             <---------DEAR3(2)                                                                          <-----------HVH21                                                                         <---------O2                                                                         --------->O2                                                                         <---------ANAC58                                                                         <---------bZIP60(1)                                                                         --------->bZIP60(1)                                                                         <---------bZIP60(2)                                                                         <---------ANAC58                                                                         <---------TGA2(1)                                                                         --------->TGA1a                                                                         --------->TGA2(1)        ---                                                                        ----------->STF1          ---                                                                       <---------TGA2(2)         <---       --------->HSFB2a(2)              ----------->RAV1(1)           ----------->HVH21         <----       <---------HSFB2a(2)      <-------TEIL                     <---------TOE2(3)            -------      <---------ETT(2)         <--------P            <-----------HVH21----------->TGA1      <-------- ------>YAB1        <---------RVE1(1) --------->At4g35610--------->ANAC46<---------TGA1a--------->YAB1   gcatgatgtcgagaaactctcgatattttgcaggttgatcagccccaaatgcttccttcacagcattgatgtatgacgtcgcttcatcaatagtaaacgc  8585100                  --------->YAB1                 <---------ATHB12      --------->At4g35610      --------->HSFC1(2)      <---------HSFC1(2)                        <------------CBF -------->GT1    --------->MYB46(3)            --------->ATHB12 ------>LBD16   ------>MYB83                  --------->ICU4                  XXXXXXXXXXXXXXXXXXX>MIR157D ------DEAR3(1) ------>MYB46(1)             ---------->DOF2                   ----------->GT1 -----LBD16     -------->P               --------->TOE2(3)         <------------CBF -->ANAC46    <---------MYB111(2)  <---------MYB59                --------->ATHB12        --------->ZAT18 -DOF5.7(2) ------>ZmHOX2a(1)<------------CBF <---------YAB1     <---------------AGL15<--------------   cggtgataagcttcctccaaccatggtctaaaattggcctaatccataaagattgaagaggtctcaactcattgaagaaacagaaaatagagtgcataaa  8585200                                                                                                  ---                                                                                                  <--                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                       ------>ZmHOX2a(1)                                                                                       ==============                                                                                      --------->TOE1(3)                                                                                      --------->TOE2(3)                              <---------MYB46(2)                                     ----------------                              <---------MYB111(2)                                    ------>ZmHOX2a(2)                              <---------MYB111(1)                                   <------ZmHOX2a(2)                              <---------MYB55(2)                                   <---------ARR11(3)               --------->ANAC58    ----------->RAV1(1)                             --------->ARR11(3)               --------->ANAC46 ------>MYB46(1)                                    --------->ARR14(2)               --------->ANAC58 ------>MYB83                                       <---------ARR14(2)    --------->TOE2(3)         --------->AtMYB61                       <-------TEIL===================  <-----------ARR10           --------->MYB46(3)            --------->YAB1        <------ZmHOX2a(1)--  <---------ARR11(3)--------->TOE2(3) ------------>CBF      <---------ICU4--------->ANAC46     ------ -AtSPL8    ------>ZmHOX2a(1)--------->ANAC46             --------->GLK1(2)  ----------->RAV1(1)<----   tacaaatcttattcctcaagaaacttaatccaccaaacaacacaatagccgaattagaagaatcatgtcaaattcatcgcaacaggatccttaagaagat  8585300     --------->WOX13(1)   ------------>CBF  --------->GLK1(2) ------>HSFB2a(2) -------HSFB2a(2)                                                                           <-------- ---->CCA1(2)                                                                               --------- --->ARR14(2)                                                                               <-------- --->AGP1                                                                                  <---------CCA1(2) ----ARR11(3)                                                                            --------->YAB1 ----ARR14(2)                                                                         ------>MYB46(1) ==HOX2a_HOX2a                                                                        ------>MYB83--- ->AGL3                                                                      <----------DOF2------->TEIL ==HOX2a_HOX2a                                            ----------->GT1   <---------DAG2 <---------ARR14(1) ------->LBD16                                     --------->ANAC58<---------ANAC58 --------->TOE2(3) --->ARR11(3)                                      --------->ANAC58<---------ANAC58 <---------MYB59 --ZmHOX2a(2)         ---------->DOF2      <------ZmHOX2a(1)   <------------CBF  <-----------GT1  <--   ccagaatcaatctcgagtagaaagaaaagaaaacaaaaccaagaaggatgagcaagaaactagaaaattgctcgagcgccttttaacctaatcgtatctg  8585400       ==================HOX2a_HOX2a<-----------HVH21       <------ZmHOX2a(1)--------->TOE2(3) -ARR14(2)              --------->TOE1(3)                                     <-----------GT1 >ARR14(2)             --------->ZAT6   --------->At4g35610        --------->ANAC58 -ARR11(1)        ------>ZmHOX2a(2) <---------MYB52(1)             --------->ANAC58               --- ------>ICU4      --------->YAB1   --------->LBD16               <------ZmHOX2a(1)         <---------At4g35610 -------YAB1  <---------YAB1     <---------LBD16               <---------TOE2(3)           --------->At4g35610   atgatggaaggagaagatgatcgtaaccctaatcttccggtgagcgaaactatgttcaatcgaatgaggaagcaagtatgttaccgatatataagcagac  8585500                                                                            ----------->GT1                              --------------------->WRI1               --------->ANAC58                         <-------TEIL                                  --------->ANAC58                      <---------HSFC1(2)                           <---------HSFC1(1)                      --------->HSFC1(2)                           <---------HSFB2a(2)                      <---------HSFB2a(1)                          --------->HSFB2a(2)                      --------->ZAT2                           --------->GLK1(1)                      <---------At4g35610                     <---------ARR11(3)                      --------->At4g35610                     --------->ARR11(3)   <----------ID1     <---------ZAT2                   --------->GLK1(1)  ---------->DOF2 ------->DOF2   ---------->DOF2   ---------->ID1 --------->MYB52(1)--------->HSFC1(1)        <-------   caaagacgacaatgaacaagaagcagcttcgtcttcgtcttcttcgcagagtaagggagttcaagatttctagaagcaaagtaaaacttcagagactttt  8585600  Previous    Next  AGI:  At1g24230.1    Description:  paired amphipathic helix repeat-containing protein. similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G23810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40976.1); contains InterPro domain Paired amphipathic helix; (InterPro:IPR003822) Range:  from: 8584028    to: 8585124    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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