Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ALFIN1                                            <-------MYC3                                            ------->MYC3   <-------GAMYB                                         <---------ALFIN1 <---------MYB46(3)          --------->At4g35610                                        <---------REM1(2)<---------AtMYB61           <---------ARR11(3) -------->TOE1(3)              ------>ZmHOX2a(1)    <---------ANAC46                 --------->ARR11(3) -------->TOE2(3)         <---------ANAC58 <---------ANAC55(2)         <-----------RAV1(2)       <--- --------GT1              <---------ANAC58 --------->ANAC55(1)        ------>ZmHOX2a(1)------>ZmHOX2a(2) ->AHL20(2)    ---------->DOF2--------->TOE2(3)   <---------ZAT14     ========================HOX2a_HOX2a   taccttaatcttgttaacaaagctaatagcttcctcaaactcaacacgtttcttcagtggaggttgtccatcctcaggttgaagtgtgatctcaaaaccc  8569600                                                                                     --------->ZAT6         --------->ICU4                              <----------DOF2       --------->ZAT2        ----------->GT1                           --------->ARR11(3)       <---------ZAT2      ---------->DOF2                             <---------ARR11(3)       --------->At4g35610    --------->ANAC58                          ---------->DOF2              <---------At4g35610    --------->ANAC58                     <----------DOF2<-----------GT1  <-----------RAV1(2) ------MYB52(1)                          ------>ZmHOX2a(1)            --------->ANAC46        -------   ttaggcaagaaagtattaaaccccaaaatcaactcttggtgtcctttgaaaagttcttttaccctagttatcacaccagctgtatcaactctacaatgaa  8569700                                        <---------MYB59                       <---------At4g35610              <---------ICU4            --------->TOE2(3)             <---------ATHB12           --------->TOE1(3)           --------->WOX13(1)        <-----------GT1        --------->ANAC58--------->ARR14(2)                                         <---------AHL20(2)      ---------->DOF2  --------->At4g35610                ----------->GT1     <---------TOE2(3) -->YAB1--------->ANAC58<---------ARR14(2)   --------->YAB1               <----------DOF2    --------   aaacacaattaagcaatcagttctcagataccaagtttttaacctaaacataacaaggagaagaaaaaaactatacctttgagatttaaaattcttcata  8569800                                                            --------->GLK1(1)                                                            --------->CCA1(2)                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                                 --------->LBD16           --------->ARR11(1)                                 ------>ZmHOX2a(1)   <----------DOF2                               ------>ZmHOX2a(2) --------->ANAC46                               =====================HOX2a_HOX2a                   <-----------GT1            <---------REM1(2)                              <-------           ----------------------->TaNAC69(2)------>ZmHOX2a(1)                               <-------  --------->HSFB2a(2)    ------->MYC3        <-----------HVH21                          --------->At4g35610  <---------HSFB2a(2)    <-------MYC3     ---------->ID1 <---------TOE2(3)           <---------At4g35610 ->YAB1    <-----------HVH21 --------->ARR11(3) <---------LBD16          <---------ANAC46    --------   acctcgagaaactcgtcatattttccacgttgatcctgaaatttgtccttcacggctttaagatatgcaagagcgtcgtttgtagttagcttctgagcac  8569900                <---------MYB46(3)          --------->YAB1         <---------ATHB12                                  <------ZmHOX2a(2)         --------->MYB46(3)                               --------->ARR11(3)      <---------MYB111(2)                      --------->AHL20(2)    ------>ZmHOX2a(1)                         --------->AHL20(2) ------>ZmHOX2a(1)                         <---------------AGL15                                   <- --ZAT18------>MYB46(1)                    --------------->AGL15   ---------->DOF2             <----- --ZAT14-------->P                        <---------YAB1  <---------ARR11(3)                 -------- ->ZAT14------>MYB83                <-------TEIL     --------->MYB52(1)         <---------ARR11(3) --   ttcctcctccaaccatggtgtttgaagttgaacagagcttcattaccattaaaaaaaacagatcatttagaaagctattcaacatctcataagaccaaag  8570000                                                  --------->At4g35610     <----------DOF2                           ---------->DOF2 --------HSFB2a(1)                        <----------ID1                                     -------- ----MYB52(2)     --------->ANAC58     ---------->DOF2                                     --------->TOE1(2) -->DOF2          ----------->GT1   <---------At4g35610                  <-------TEIL--------->YAB1 ------->HSFB2a(1)--------->ANAC58  --------->At4g35610       <----------DOF2       <---------ATHB12   aacgtttctttagagaattcaagtaaaatttgggattcagcaaaagaacaaaagctgaaaacaactttcttcatgttcatctacaaatcaaaacctagta  8570100                                                                             <------ZmHOX2a(2)                                                                            <---------ARR14(2)                                                                            --------->ARR11(3)                                                                            --------->ARR14(2)                                                                            <---------ARR11(3)                                                                     ----------->RAV1(2)                                                                     =============================RAV                                                                   --------->REM1(1)                                                                   <---------ALFIN1                                                                 ================RAV  ----------->RAV1(1)                      --------->ANAC58                           ----------->RAV1(1)<---------At4g35610                      --------->ANAC58                        --------->ANAC58      --------->At4g35610              <---------ANAC55(2)                             --------->ANAC58      --------->ZAT2            --------->YAB1               ------>MYB46(1)      --------->ANAC46------>ZmHOX2a(2)           <---------ATHB12              ------>MYB83       <---------ATHB12--------->AGP1        ---       ------------>CBF----------->GT1 <---------MYB59      ---------->DOF2 <---------AGP1        <-- --->GT1 --------->WOX13(1)     ---------->DOF2         ------------>CBF   <---------CCA1(2) --------   aaactcaaaatcaatcacataaacaaggaaaattcaaagaaccgaacttgaatttcatcccaataagcaacacctgtagatctagcagctacagaaacaa  8570200                                                                                        ----------->GT1                                                                                        --------->YAB1                                                                                      <------------CBF                                                      ------>ZmHOX2a(1)             <---------YAB1                                                     --------->TOE2(3)             <---------AHL20(2)                                         ------>ZmHOX2a(2)                    <---------YAB1                                         ====================HOX2a_HOX2a   <---------ZAT14    ----------->GT1                      --------->YAB1                  --------->At4g35610 ------>AHL20(2)                       <---------ARR11(3)                <---------At4g35610 -------AHL20(2)            ----------->GT1   --------->TOE2(3)  <-----------GT1   --------->AHL20(2) ---->CBF     ---------->DOF2          --------->ARR11(3) <---------GLK1(2)--------->ZAT14   tttatgaagaaaaaacaaaaggagacggaccagaaaaaatcgatcttaacttaatcctcagattatttcacattcagttcacgattaaaattgtaatacc  8570300                                      <---------ICU4                                     <---------YAB1                                   --------->YAB1                        --------->ANAC58                        --------->ANAC58                      --------->MYB52(1)               ----------->GT1    <------ZmHOX2a(2)                                                 >               ==========================HOX2a_HOX2a                                             >>>>               <------ZmHOX2a(1) --------->ARR11(3)                                           >>>>>>>              ----------->GT1    <---------ARR11(3)                                        >>>>>>>>>TBF1           ---------->DOF2---------->DOF2                   <---------ZAT14             >>>>>>>>>TBF1   caaaaatcaaacagaaaggataaaaaacgaaagaagatcatcatcgtttatgtgttagagagtttaccgaagaaattcagagaagacgaagaagaagaag  8570400                                     <---------At4g35610                                     --------->ZAT2                              --------->ANAC58                              --------->ANAC46                              --------->ANAC58                         ------>ZmHOX2a(1)                   <---------HSFB2a(1)                   --------->HSFB2a(1)                   --------->HSFC1(2)<---------ZAT2                   <---------HSFC1(2)--------->At4g35610        --------->HSFB2a(2) ------>NtERF2 >>>>>>>>TBF1      --------->At4g35610 >>>>>TBF1    >>>>>>>>>TBF1--------->DEAR3(1)                                   ---------->DOF2 >>TBF1 <---------HSFB2a(2)----------->HVH21<----------ID1                 ---------->DOF2      -----   aagaagaagtctagaagaagaagcttcctccgacgaaacagctgagaagacaaaaactattcaacaattttcagacagaaagaaaagactcactgagcaa  8570500  Previous    Next  AGI:  At1g24190.1    Description:  ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog). Identical to Paired amphipathic helix protein Sin3 (SIN3) [Arabidopsis Thaliana] (GB:O48686;GB:Q0WTD6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01320.1); similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70060.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40976.1); similar to hypothetical protein OsJ_000071 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10246.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14871.1); contains Int Range:  from: 8563547    to: 8569985    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version