Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ARR11(3)                          <--------HAHB4                                 <---------ARR11(3)                          --------->ATHB12                                 --------->ARR14(2)                         <---------YAB1                               ----------->ARR10                            <------ZmHOX2a(2)                            --------->ANAC46                               --------->ARR11(3)                    <---------WOX13(1)                                    <------ZmHOX2a(1)                <------NtERF2--------->LBD16                       --------->ANAC58              <---------DEAR3(1) <---------ARR14(2)                --------->ANAC58          ------->TEIL   ------>ZmHOX2a(2)                        --------->TOE1(2)             ----- ----ANAC46  --------->At4g35610--------->GLK1(1)          <---------ANAC46<---------ARR11(3)   ----- >ALFIN1 --------->MYB52(1)<---------LBD16             <---------------------WRI1               -----   aagaacagaatgaacggctgcgattgatccacggagatactctgagtccaaagtcatagcgatgtgaacaagcgaaggatcattagaactagaagaagac  8558400                                                                     --------->MYB52(1)                                                                 --------->TOE2(3)                                                                 <---------HSFB2a(2)                                                                ----------------->AGL2                                                                ----------------->AGL1                                                                <-----------------AGL1                                                            <---------ZAT2                                                            <---------HSFB2a(1)                                                            <---------At4g35610                                                            --------->At4g35610                                             <---------MYB52(1) ----------------->AGL3                                           <---------ANAC58 --------->ZAT2      --------->ARR11(3)      <-------TEIL <---------ANAC58 --------->HSFB2a(1)      <---------ARR11(3)     --------->CCA1(2)              --------->HSFC1(2) --------->ANAC58           <---------ARR14(2)              <---------HSFC1(2)                   <--- --------->ANAC58           --------->ARR11(3)             <---------ARR14(2)                 ------- --------->ANAC46           --------->ARR14(2)             --------->ARR14(2)                 <------ ---->ANAC58                <---------ARR11(3)           --------->LBD16                      <------ ---->ANAC58    --------->ZAT14  --------->ANAC46      <---------LBD16 --------->ANAC46      <------- ---->ANAC46    <---------ZAT14  <---------ALFIN1 --------->ZAT14--------->HSFB2a(2)         --------   gacacgaagttctctctgttcactgatgaagatacacactccttgccgtttctatactccggagcttccataaacggaccaagtttactaaacccattat  8558500                     <---------ETT(1)                     --------->At1g77200                     --------->ANAC46                <-----------HVH21              <------NtERF2             <---------ATERF1(1)             ------>NtERF2            --------->DEAR3(1)            --------->RAP2.3(3)            --------->DREB2C(2)            --------->RRTF1(2)            --------->RAP2.3(2)            <---------ATERF1(2)            --------->ATERF1(2)            --------->RAP2.6(2)            --------->RRTF1(3)           --------->DEAR4(2)           --------->RAP2.6(1)           --------->ATERF1(1)           <------NtERF2           --------->RRTF1(1)           --------->RAP2.3(1)           --------->ORA47(2)           --------->ERF1          <---------ATERF1(1)          --------->ABI4(1)          ------>NtERF2          <---------DREB2C(1)          <---------At4g35610          --------->At4g35610          <---------RAP2.3(1)         --------->RRTF1(3)         --------->RAP2.6(2)         --------->RRTF1(2)         <---------ATERF1(2)         --------->RAP2.3(3)         --------->RAP2.3(2)         --------->ATERF1(2)         <---------ALFIN1         --------->DEAR3(1)         --------->ANAC46         <---------DEAR3(1)        --------->DEAR4(2)        --------->ERF1        --------->RAP2.3(1)        --------->RAP2.6(1)        --------->ORA47(2)       --------->LBD16       <---------At4g35610       ------>NtERF2 --------->DEAR4(1)                              --------->DOF5.7(2)       <---------ATERF1(1)                                           --------->At5g28300      --------->DEAR3(1)                                            ----------->GT1            <-----      --------->ANAC46                                           --------->MYB52(1)           -------      <---------ALFIN1----------->RAV1(1)                       ------->GAMYB                 -------    <---------ATERF1(1)                        <-----------GT1 <---------MYB55(2)          --------->AtMYB61    =====================================HOX2a_HOX2a           <---------MYB52(2)          --------->DEAR3(1)    ------>ZmHOX2a(1)--------->DEAR3(1)   <------NtERF2      ----------->RAV1(1)           <---------ALFIN1   <---------ALFIN1  --------->DREB2C(2) --------->LBD16    --------->MYB46(3)            --------->MYB46(3) --------GT1--------->ANAC46           <---------LBD16     ------>MYB46(1)              --------->ANAC58 -->ATHB51<---------DEAR4(2)         --------->ANAC46      ------>MYB83                 --------->ANAC58 ---ICU4--------->ATERF1(1)         ------>ZmHOX2a(1)<---------ARR14(2)                 --------->ANAC46 --HAHB4--------->RRTF1(1)        ------>ZmHOX2a(2)  --------->ARR14(2)               <---------ALFIN1 --YAB1--------->ABI4(1)<---------ALFIN1--------->LBD16   --------->ANAC46     --------->WOX13(1) --- ->ICU4--------->At4g35610      <---------ARR11(3)------->GAMYB--------->MYB46(3)<---------ATHB12<---   tacctcctccgccgccgccatcaccgacactcgtgatcctcgccggaatcaaccgtataccaacaacaaacggtaacagagcaatcaaacacaccaccgt  8558600            --------->bZIP60(2)            --------->ANAC58            --------->ANAC58       --------->ANAC58       --------->ANAC58       --------->ANAC46                                                    --------->ATHB12 ------HVH21<---------bZIP60(1)                                           --------->ICU4 -->DREB2C(2)                                                      --------->MYB46(3) -->DEAR3(1)--------->bZIP60(1)                                  --------->MYB52(1)    <---------YAB1 ------->DOF2----------->RAV1(1)            ------->TEIL   <---------DAG2 <---------YAB1            - ------WRKY12------>NtERF2             <---------AtLEC2    <----------DOF2<---------ATHB12       <---   caaagaaaaacgcgacgacattactaaacaaaaacgcgtttgaatgaatcaaagattaagactttatcaacggctaatgatttagcattgtgaaagatta  8558700                         <---------HSFB2a(2)                     <----------DOF2                     <---------DAG2                  <-----------------AGL1               --------->HSFC1(2)               --------->HSFB2a(1)               <---------HSFC1(2)                                                      >>>>>>>>>TBF1               <---------HSFB2a(1)                                            >>>>>>>>>TBF1               --------->KAN4(1)                                       <------ZmHOX2a(1)     >>>>>>>>              <---------KAN4(2)                                  ---------->DOF2    >>>>>>>>>TBF1              --------------->AtSPL8                            <------ZmHOX2a(1)>>>>>>>>>TBF1     --         ---------->DOF2 --------->HSFB2a(2)                  <---------TOE2(3)---------------------- --------->DOF2<---------KAN4(1)           <---------REM1(2)--------->CCA1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------ANAC55(2)--------->KAN4(2) <---------ANAC46        --------->CCA1(2)>>>>>>>>>TBF1  >>>>>>>>>TBF1   agtaaagaactgaaagaatgttcctttttggaagttttgtgtctctccacagagatggagagataaggaaagaggaagaagaagaagaagaagaagaaga  8558800                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                  --------------->AGL15                                                                  <---------------AGL15                                                                 --------->TOE2(3)                                                                 <---------------AGL15   <------MYB83     <---------ICU4                               --------------->AGL15   <------MYB46(1) <---------YAB1       <----------DOF2         ----------------->AG   <---------MYB46(3)*TSS       <---------YAB1                  ----------------->AGL1 >TBF1  <---------YAB1         <-----------HVH21      --------->ARR11(3)  <------ZmHOX2a(1)       <-- ------->ATHB12    --------->ICU4 <------------CBF  <---------YAB1------>ZmHOX2a(1)               --- -->ANAC81---------->DOF2   <------------CBF  <----------DOF2   ----------------->AGL3     --------->LBD16   aagattggttatgaaagagtcatttttgctcattgtcattgcctttaacttttgatgattttgttttcctaaattaggagaatacgaatcacgcgcgtat  8558900               <-----------TGA1              --------->ANAC58              --------->ANAC55(2)              --------->bZIP60(2)              <---------TGA2(1)              --------->bZIP60(1)              <---------bZIP60(1)              --------->ANAC58              --------->TGA2(1)              <---------TGA1a              =====================================bZIP_DOF              --------->O2              <---------O2              --------->TGA1a             <-----------STF1                                                              <---------        <-----------HVH21           <---------TOE2(3)                              --------->DAG2       <---------ANAC58             <---------TOE1(3)                            ---------->DOF2       <---------ANAC55(2)       --------->DOF5.7(2)                         <---------TOE2(3)       <---------ANAC58        <---------MYB46(3)                           --------->MYB52(1)       >>>>>>>>CAMTA3 <---------TOE2(3)     --------->ALFIN1              <---------MYB52(2)        < -------AHL20(2)      <---------TOE1(3) ---------->DOF2               --------->At5g28300  <---------ICU4 ------>AHL20(2)--------->TGA2(2)<---------MYB52(1)                  ----------->GT1----------->GT1 -   taaaaaaacgcgtgagacgtcattaaggcttagtcgttaagggaaagtgttgaagaaacaaatccctaagactgtaattaacgaaaaggttaattactac  8559000                                                   <------MYB83                                           <---------ZAT2                                           <---------At4g35610                                           --------->At4g35610                                           --------->ZAT2                                          ------>NtERF2                                         <---------ATERF1(2)                                         --------->ATERF1(2)                                         <-----------RAV1(2)                                        <------NtERF2                                        --------->ATERF1(1)                                       --------->ABI4(2)                                       ------>NtERF2                                     --------->ATERF1(1)                                     <------NtERF2<---------AtMYB61                                    <---------RAP2.3(1)                                    <---------DEAR4(2)                                    <---------ORA47(2)                                   --------->ALFIN1<------MYB46(1)                                <---------TOE2(3) --------->MYB59         --------->ARR14(1)                <---------TOE1(3)  <---------DEAR3(1)                   <---------HSFC1(2)          <                <---------TOE2(3)  <---------DREB2C(2)                  <---------HSFB2a(1)     =====    <---------TOE2(3)    <-----------------AGL1 --------->REM1(2)       --------->ATHB12        <---- --------->CCA1(2)      ---------->ID1----------->HVH21          --------->ZAT2<---------DAG2  <----- --GT1      <----------DOF2    ---------->DOF2 --------->ALFIN1  <---------At4g35610           <----- ---------ARR11(3)<---------ARR11(3)<---------DEAR3(2)           <---------ZAT2<----------DOF2<------ -------->ARR11(3)--------->ARR11(3)<---------ATERF1(1)          --------->At4g35610         <-------   aagatttaggtgagttttaaggtcttggcccattaaggcggtgccagctgtgtaggtcgagggaaacagctggatgattcgctttttggtaattggacgg  8559100                                        <---------ALFIN1                                      <---------ALFIN1                                     <---------ZAT14                                     --------->ZAT14                                     <---------ZAT18                                     --------->At4g35610                                     <---------At4g35610                                  <---------At4g35610                                  --------->At4g35610                                <---------ZAT14                                --------->ZAT18                              ------->PIF5                              <-------MYC4                              ------->MYC4                              ------->PIF4                              <-------PIF4                              <-------PIF5                              <-------MYC3                              ------->MYC3                              ------->MYC2                              <-------MYC2                             --------->TGA1a                             <---------bZIP60(2)                             <---------TGA1a                             <---------O2                             <---------ANAC55(2)                             --------->O2 ---------TOE2(3)            <---------ANAC58 ======================================MYC_MYB                 <---------ICU4 ---GAMYB                    <---------ANAC46                 --------->ICU4 ----DEAR3(2)                <---------ANAC58     <---------ANAC58                                 <- ----MYB46(3)                --------->ANAC55(2)  <---------ANAC58                                 <- ---DEAR3(1)             <-----------HVH21        <---------ANAC46                        <---------AHL20(2) --ORA47(1) --------->YAB1  ------------>OsbHLH66 <---------AtLEC2      ----------->GT1  --------->AHL20(2)   ttgagattaaacgatgagaactcaacttgtcacgtgcgctgcacacctatttgcttgtaatgtagtaatggcattggaaaaatgtttgctaataaatgtt  8559200                                                             <--------ATHB1                                                             <--------HAHB4                                                             --------->YAB1                                                             <---------ICU4                                                             --------->ATHB51                                                            <---------ATHB12                                                            --------->ICU4                                                       --------->ANAC58                                                --------->YAB1                                              --------->ANAC58                         <------ZmHOX2a(1)                                              --------->ANAC58  <-----------GT1      --------->LBD16                                    <---------ANAC58   --------->ANAC46             <---------LBD16        ----------->GT1             <---------ANAC58   --------->ANAC58             <-----------RAV1(2) --------ANAC58                    --------------->AtSPL3   <---------ATHB51       --------->LBD16 --------ANAC58    <---------AHL20(2)<---------SPL7--------->YAB1                  <---------LBD16   tgtttgccagtggaaaaatgttttattttttgtgattttcgtactggcaagcataataagcaataattaccctagacaatatttccccaggaatgttttt  8559300  Previous    Next  AGI:  At1g24170.1    Description:  GATL8/LGT9 (Galacturonosyltransferase-like 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GATL9/LGT8 (Galacturonosyltransferase-like 9) [Arabidopsis thaliana] (TAIR:AT1G70090.2); similar to GATL9/LGT8 (Galacturonosyltransferase-like 9), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT1G70090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40973.1); contains InterPro domain Glycosyl transferase, family 8; Range:  from: 8557205    to: 8558821    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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