Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->MYB46(3)                                                                                     ----------->RAV1(1)                                                                                     ------>NtERF2                                                                                    <---------ALFIN1                                                                              <---------WRKY12                                                                              <---------WRKY38(1)                                                          <-----------GT1    --------->WRKY18(1)                                               <---------AHL20(2)           <-----------HVH21                                 --------->TOE1(3)      <---------MYB52(2)--------->DAG2                           <----------DOF2    --------->YAB1   --------->ANAC58  --------->ANAC46                           --------->TOE2(3)  --------->AHL20(2)        --------->CCA1(2)                <-----------GT1  --------->TOE2(3)<---------YAB1      --------->YAB1--------->ANAC46   <-----------GT1      <-----------GT1       <---------AHL20(1)   ---------->DOF2------->GAMYB ---->ZAT6   <-----------GT1     --------->YAB1<---------YAB1  --------->ANAC58 -------->P   actattcacgatttttttctacagttttactttaatcttaaaaaccaatattattacaaataaccaagtcaaagataaggtcaaccccaccagacaaaac  8549100                                                          <---------ANAC46                                                          <---------ANAC58                                                      --------->GLK1(2)                                                      <---------ARR11(3)                                             --------->ARR11(3)                                             <---------ARR14(2)                                             <---------ARR11(3)     --------->ANAC46                        <---------GLK1(2)     --------->ANAC55(1)                     <---------ARR14(3)                               <------     --------->ANAC58                    <------ZmHOX2a(1)<---------ANAC58                    -------     --------->ANAC58            <----------DOF2      --------->ARR11(3)                     <-------    <---------LBD16         XXXXXXXXXXXXXXXXXXXX>MIR395B/C/F                        <-----------GT1  <---------ZAT14          --------->ZAT14   --------->ARR14(3)                   <----------DOF2  --------->ZAT14          <---------ZAT14 ----------->ARR10                   ------>ZmHOX2a(1) <---   ttagttcacggcacaacaagactaagcactgaagtctttgagaggaagattttgaaaatctcgtgcaaagactaaaacatccttctttactatatatatc  8549200                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                             ------>NtERF2                                                                                            ---------                                                                                           --------->ATERF1(1)     <---------ALFIN1                     =============================HOX2a_HOX2a         <------NtERF2  --------->ANAC46     --------->YAB1    <---------ANAC58       <------ZmHOX2a(2)         ------>NtERF2 ---ARR11(3)           --------->ANAC55(2)------>ZmHOX2a(1)    --------->AGP1             <---------ATERF1(1) -->ARR11(3)  ----------->GT1            <---------ANAC58 --------->MYB52(1)             ----------->HVH21 --CCA1(2)   <---------TOE2(2)    ------------>CBF       --------->ZAT18      <---------At4g35610 -------DOF2 <---------TOE2(3)   --------->ANAC46  <---------KAN4(2)--------->MYB46(3) --------->ANAC46   tttcgctccactacgaaggttattttcgtaattcgacacaattccttacagagaataagcgaacagatcaacaactactctgctcttacaggcgacgacg  8549300      -------->P     ------->GAMYB    <---------MYB55(2)    <---------MYB111(2)    --------->MYB46(3)                                         <---------TOE2(3) --------->MYB46(3)                                           ---------->DOF2 --->bZIP60(1)                                               --------->AHL20(2) ----O2                                                      <---------AHL20(2) ----bZIP60(1)                                          ------------>CBF --->O2 ------->GAMYB                                  ----------->RAV1(1) --->bZIP60(2)                                         ------>MYB83                       <---------- -----STF1                                             ------>MYB46(1)                 --------->ARR14(2) >DEAR3(1)                   ---------->DOF2        --------->ANAC46        ------------>CBF     <---   tcaacaacaacccaaaataccaaaaaccctcaaaagtctcaaacaaaactcaaaacccaacaattaaagaaacaacatttcaatatacagatttacttcc  8549400                 --------->MYB52(1)           --------->TOE2(3)                                     <---------ATHB12     --------->ARR14(2)                                <----------DOF2     <---------ARR14(2)                               <---------DAG2    ------>ZmHOX2a(1)     <---------ARR11(3)                           <---------MYB52(1)    ------------>CBF     <---------GLK1(2)   ------------------------>ANAC81       <------------CBF -GT1--------->ARR11(3) <------------CBF   ---------->DOF2 <-----------GT1 -------DOF2------>ZmHOX2a(1)  <---------MYB52(2) --------->DOF5.7(2)  --------->TOE2(3)   ----------   ttttacagattttcctaaaaaaccgaaattgaaacaaacaaaaccaaaagacgttaccttttttccattgattcctcaattctctaaacaaatgagttaa  8549500                                                     --------->TOE2(3)                                     <---------ARR14(2)                       <---------DAG2                                 <------NtERF2      --------->ZAT6            <----------DOF2       <                                ------>NtERF2  --------->At4g35610          ------>ZmHOX2a(1)   -----                       <---------RAP2.6(3)  ------>ZmHOX2a(1)       --------->TOE1(3)      --------->WOX13(1)             --------->ICU4    <---------ALFIN1<---------At4g35610  --------->TOE2(3)     <---------ICU4  <---------AtLEC2 <---------REM1(1) --------->ARR14(2)            --------->ZAT6        <---------ATHB12 ->GT1   ------>NtERF2 ------>NtERF2<---------MYB52(1)        --------->TOE2(3)   ---------->ID1<----   tcttccatggctgccatgttgatgcagccatggccaccgtttcttcctcatctaaccctagttttcttaaccctaatcctctttttccctaatcaatcct  8549600                                                                                        ------>NtERF2                                                                                        --------->LBD16                                                                                       --------->RAP2.3(2)                                                                                       --------->RRTF1(2)                                                                                       --------->RRTF1(3)                                                                                       --------->DEAR3(1)                                                                                       ----------->RAV1(1)                                                                                       --------->RAP2.6(2)                                                                                       --------->RAP2.3(3)                                                                                      --------->RRTF1(1)                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2                                                                                      --------->ERF1                                                                                     --------->ABI4(1)                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2 --                                                                                    --------->ATERF1(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->RAP2.3(2)                                                                                    <---------ATERF1(2)                                                                                    <---------DEAR3(1)                     <---------HSFC1(2)                                             --------->DEAR3(1)                     --------->HSFC1(2)                                             --------->ANAC46                 --------->ANAC46                                                  --------->DEAR4(2)                <---------HSFB2a(2)                                                --------->ATERF1(1)         --------->ARR14(2)                                                        --------->RAP2.3(1)         <---------ARR14(2)                                                        --------->ERF1 <--         <---------GLK1(2)                                                         --------->ORA47(2) -----------GT1 ------>ZmHOX2a(1)                                                 <---------RAP2.3(1) ->ZmHOX2a(1)   --------->LBD16            ----------->HVH21             --------->LBD16<------NtERF2 ------DOF2     --------->HSFB2a(2) <-----------GT1--------->MYB46(3)  <---------LBD16--------->RAP2.3(1)   tttctcaatccgattctcctcgaaacatcgaaacatttttcccaaatgacacaatcacccctccagttcaatctccggttctatcgccgccgcaaaaccc  8549700                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                      <---------ANAC46                               --------->AHL20(1)                 <----------DOF2                               --------->ARR11(3)            --------->ANAC58    <---------ANAC58                               <---------ARR11(3)         --------->At4g35610    <---------ANAC58          <---------At4g35610 --------->RVE1(1)        --------->At4g35610  <---------At4g35610 -----      <-----------TGA1        --------->CCA1(1)        <---------At4g35610  --------->At4g35610------      <-----------HVH21   <------ZmHOX2a(1)           ------->GAMYB--------->ZAT14       <<<<<<<<<TBF1 ------->YAB1 --------->ARR14(2)                   <-----------GT1<---------DAG2 <---------ANAC46 -------ATHB12<---------ARR14(2)         <---------DEAR3(1)  --------->ANAC58  --------->At4g35610   atcatcttcgtcatcggattcagacagaggaaatatcttgagggctgtgcttataacagcagcaagcactttacttgtagcagccgtgttcttcttcctc  8549800                                      --------->WRKY45                                      --------->WRKY12                                      --------->WRKY38(1)                                    <-------GAMYB                                   <---------ANAC58                                   <---------ANAC46                                   <---------ANAC58                           <---------At4g35610                                <---------DEAR3(1)                            --------->ATERF1(1)                                --------->ALFIN1                      <---------DEAR3(1)                               --------->ATERF1(1)                    --------->WRKY12                               <-------GAMYB                         <---------MYB52(1)                              <------MYB83  <---------ALFIN1     ------>ZmHOX2a(1)                              <------MYB46(1)------->GAMYB   <---------ARR14(2)                             <---------DEAR4(1)              --------->ARR14(2)<---------RAP2.6(2)                 <------ZmHOX2a(1)<------NtERF2         --------->MYB52(1) --------->ATERF1(1)              <------NtERF2  <---------DREB2C(2)       ------->GAMYB<-------GAMYB  <----------DOF2           <---------LBD16   <---------DEAR3(1)        --------->AtMYB61   <------NtERF2      <---------REM1(1)      <---------MYB46(3)        <---------ALFIN1  <---------ANAC46 ---->TOE1(1) --------->ATERF1(1)------>NtERF2        --------->MYB46(3)<---------LBD16     --------- >ZmHOX2a(1)<---------DEAR3(1)<---------DEAR3(2)      <---------MYB55(2)<------NtERF2  <---------At4g35610   gtccataaatgtaggcggaggagaaacagagtcggtggcgttgacaacacccttcaaccaccggttcctccgttggcggaagcggctttagctcgtgaag  8549900                       --------->DAG2                      ---------->DOF2                   <---------ANAC55(2)                   --------->ANAC58                   --------->ANAC58                --------->ARR14(2)                <---------ARR14(2)               <------NtERF2              --------->LBD16            <---------At4g35610            --------->At4g35610                                                  ------->GAMYB            <---------LBD16                                                   ----------->RAV1(1)   <       <---------ARR14(2)                                               ----------->GT1    ----------       --------->ARR14(2)           <---------HSFB2a(2)               ---------->DOF2  ---------->DOF2 -->HVH21 <---------DEAR3(1)        --------->HSFB2a(2)  --------->ALFIN1    --------->REM1(1)    ---   ggtttactcgattcggcggaaacgtaaagggtttgattctagatgagaatggtctcgatgtgttgtattggagaaagttacaacagagtcaaagagataa  8550000  Previous    Next  AGI:  At1g24150.1    Description:  ATFH4/FH4 (FORMIN HOMOLOGUE 4); actin binding / protein binding. Identical to Formin-like protein 4 precursor (FH4) [Arabidopsis Thaliana] (GB:O48682); similar to ATFH8 (FORMIN 8), actin binding / actin filament binding / profilin binding [Arabidopsis thaliana] (TAIR:AT1G70140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14935.1); contains InterPro domain Actin-binding FH2 and DRF autoregulatory; (InterPro:IPR003104); contains InterPro domain Actin-binding FH2 (InterPro:IPR015425) Range:  from: 8549507    to: 8551982    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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