Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ALFIN1       ------->MYC3      <---------ANAC46      --------->TGA1a      <---------O2      <---------TGA1a      --------->O2                                                  <---------HSFC1(2)  --------->LBD16                                            --------->At4g35610  ------>NtERF2                                        <---------ANAC58  <---------RAP2.6(3)                               ----------->TGA1--------->HSFB2a(1) --------->ANAC46                                   ----------->HVH21                          ------ --------->RAP2.6(2)                              <---------At4g35610                      <---------ANAC58 ---------LBD16                              <---------ZAT14 <---------At4g35610          <------NtERF2 -----P<-------MYC3               --------->At4g35610  <---------ANAC58                  ------>NtERF2 ----->ATERF1(1)    ------->MYC3  <---------ZAT2  --------->At4g35610          <-------TEIL<---------ANAC58 ---GAMYB           <-------MYC3  <---------At4g35610  <---------ANAC46   --------------------->WRI1 -DEAR3(1)   <------ZmHOX2a(2)  <---------ZAT18   --------->LBD16   <---------HSFB2a(1) <---------DEAR3(1) -HVH21--------->TOE1(2)        --------->ZAT18 <---------LBD16     --------->HSFC1(2)  --------->ANAC46   ttgccgcaacgtgggatcacaacgtgtttgagagtgagctcgtcgagtactccggtgacgtttagctggaagtttctctggtacatttcgacggcgttct  8537000                               --------->LBD16                              <---------ANAC46                              --------->HSFB2a(2)                              <---------HSFB2a(2)                             <---------LBD16                <-----------HVH21                <-----------TGA1    <---------ARR14(2)     <---------ARR14(2)    --------->ARR14(2)   --------->HSFC1(2)                           --------->ARR11(3)    <---------ARR11(3)   <---------HSFC1(2)        <---------bZIP60(2)--------->AHL20(1)    --------->ARR11(3)--------->ZAT14              <---------REM1(1)  <---------AHL20(1) --------------->WRI1 <---------ZAT14        <---------ANAC46    ----------->GT1   tgagaatatcgtcgaagtcgtcagtgaagtttccggagagattagtttcggtgatgtagccaaaatgttgaaaatattgtttgagcatatagagaccatc  8537100                     ----------->GT1                                             --------->ARR14(2)             ----------->HVH21                                                   <---------ARR14(2)            <-----------HVH21                                                 <---------ANAC46           <---------TGA1a                                                   ------>NtERF2           --------->TGA1a                                                   <---------LBD16           <---------O2                                     <----------DOF2  <------NtERF2           <---------ANAC46                                <---------ANAC58 <---------RRTF1(1)           --------->O2                                  ------>NtERF2      <---------RAP2.3(1)           <---------ANAC58                             --------->ALFIN1    ------>NtERF2           <---------ANAC58                            <---------MYB52(1)  <---------RAP2.3(2)          <---------------------WRI1                  --------->LBD16     <---------LBD16          <------NtERF2                              --------->LBD16   <---------ZAT2         --------->LBD16                            <---------LBD16    --------->ZAT2         <---------RAP2.6(3)                     --------->ARR14(2)    <---------At4g35610         ------>NtERF2                           <---------ARR14(2)    <---------HSFB2a(1)        <---------DEAR3(1)                  <---------LBD16<---------ANAC58<---------DEAR3(1)        <---------ATERF1(2)                 --------->LBD16<---------ANAC46<---------RRTF1(2)        --------->ATERF1(2)                <-----------RAV1(2)         <---------HSFC1(2)        <---------RAP2.6(2)                <---------LBD16<------NtERF2--------->At4g35610        <---------RAP2.3(3)                <---------HSFB2a(2)         --------->HSFC1(2)       <---------ANAC58                    --------->HSFB2a(2)  <---------ANAC46<------NtERF2       <---------LBD16                 --------->GLK1(1)<---------DEAR3(1)--------->At4g35610       <---------ANAC58           --------->YAB1<---------GLK1(1)     --------->GLK1(2)    <------ZmHOX2a(1)   gtacttcttgccggcgtgacatccagtgaaattcaagaatgagttccaggggttcccggtggcgtttcggagaagctgcggcggaatggctgaggagttt  8537200                                                                          ---------->DOF2                                                                      ------>MYB83             <---------ARR14(2)                                       ------>MYB46(1)         <---------LBD16                                        ------>ZmHOX2a(1)         --------->At4g35610                                --------->ARR14(2)         <---------At4g35610            --------->ANAC58    <---------ARR14(2)        --------->MYB52(1)              --------->ANAC58   --------->GLK1(1)  ----------->GT1    <---      --------->MYB46(3) <------ZmHOX2a(1)       --------->AtLEC2     --------->AtLEC2 <---------AHL20(2)   gtatagaaaccagcggagactggagaaggagcgaagaacaacaagaaaaccatgaaaacacaaatcctcaccatccaaaagagaaatattaaaaagatta  8537300               <---------TOE2(3)          --------->ATHB12                     >>>>>>>>>GATA-1                                     <-          -------->ATHB1                     ----------->GT1                                       <-          --------->ATHB51             ----------->HVH21                                           <-         <---------YAB1              --------->CCA1(2)                      *TSS         --------->ARR14(2)     ----------->GT1                 --------->At4g35610                   ---------->DOF2     <----- ------ANAC55(2)    <-----------GT1  <---------At4g35610          <---------TOE2(3) <-----------HVH21   agtgaagaggtattattgagatttacaagagaattagagagatgacatagataaaactaaacaagtttgacgttggagaaagcagaggtcatttctgcgt  8537400            <-----------GT1          <---------HSFB2a(1)                       ------>ZmHOX2a(1)                            <---          --------->HSFB2a(1)                 <---------HSFC1(2)                                 ---- --------ANAC58                               --------->HSFC1(2)                                ----- --------ANAC58                               <---------HSFB2a(1)                            <------- --------ANAC46                               --------->HSFB2a(1) ---------->DOF2           <-------- --GAMYB <---------KAN4(2)             ---------->DOF2     ------>ZmHOX2a(1)        ---------->DOF2 -   tgcgtttggagaattttctatgttgaaaatgctgcattattcaaaggaaacttcctccgtcctcgtttcaaagggtctcacgaagaaaaagactaatgaa  8537500                                                       <---------ZAT18                                                       --------->ZAT18                                                 <---------ANAC58                                                 <---------ANAC46                                                <------NtERF2                                            <------MYB83                                            <------MYB46(1)                                           <---------MYB46(3)                                 <---------AHL20(2) <------MYB83                                 --------->AHL20(2)--------->ALFIN1 ------HSFC1(2)                 <---------YAB1<---------RAP2.6(2) ----->HSFC1(2)          <---------TOE2(3) <---------AtMYB61 -->TEIL          <---------ANAC58        <---------WOX13(1) --ATHB12         <---------ANAC46 <---------TOE2(3)<------MYB46(1) -TOE2(3)         <---------ANAC58---------->DOF2<---------ANAC58                                  -- -------->At4g35610  <----------DOF2    --------->ATHB12         --------->MYB59                  <--   gcttctgccaatagatagtgtcgttttatggataattaaagttgattggtggcttggtgcaatagattaggcccgatttagtcttggatgactagaaatt  8537600                                                                         <------NtERF2                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                        ------>NtERF2                                                                        ----------->RAV1(1)                                                                       <---------RAP2.3(2)                  --------->MYB52(1)                                   <---------DEAR3(1)          <---------MYB46(3)                                           <---------ATERF1(2)        <---------MYB52(1)                           ----------->RAV1(1)<---------RAP2.3(1)   <---------WRKY18(1)                            --------->AtLEC2     --------->ATERF1(2)  ----------->HVH21                               --------->ANAC46     <---------RAP2.6(2) <---------WOX13(1)  ----------->GT1              --------->ANAC58     <---------RAP2.3(3) ------->ATHB12  <------ZmHOX2a(1)       ---------->DOF2      --------->ATHB12 -------YAB1 ---------->DOF2   ---------->DOF2    --------->ANAC58    --------->RAP2.6(3) <---------MYB46(3)   gtgattgaccggtggtaaaggaccggttaaatgcaaagttggaaaaagaaccatgcaacaaaaatggttgaaggcggcagaatcaactaaattggttgaa  8537700                                                                         <-------GAMYB                                                                        --------->MYB111(2)                                                                        <---------MYB46(3)                                                                  --------->LBD16                                                                 <---------HSFB2a(2)                                                                 --------->HSFB2a(2)                                                        --------->ICU4 <--------P                                                      --------->YAB1 <---------MYB46(3)                                                     <---------YAB1 <---------AtMYB61                    <-------GAMYB              <----------DOF2  <---------LBD16   <---------MYB46(3)                   <---------MYB46(3)        ---------->ID1   <-----------GT1 --------->ATHB12    ---                   --------->MYB52(2)   <----------DOF2 <---------YAB1<-------GAMYB              ----       ---------->ID1      --------->ATHB12 <-----------GT1 <---------ICU4   <---------YAB1      ----   agtgtttttgttttttttgggtcgttgaatgtttgaattggtcttttttctttttgtgataatttttccggaggttgttgttattggttgaaaaaatcaa  8537800                                                             <---------------AGL15                                                             --------------->AGL15           <---------DAG2             <---------MYB46(3)     ------>ZmHOX2a(1)          --------->ANAC46      <---------ANAC46            <---------------AGL15        <---------ALFIN1        <---------ANAC58            --------------->AGL15   <-----------ARR10            <---------ANAC58           <-----------------AGL1                  --   --------->ARR11(3)        ----------->HVH21        --------->AHL20(2)     --------->ANAC58      --   <---------ARR11(3)   --------->ANAC58              <---------AHL20(2)     --------->AtLEC2      <- ------>TOE2(3)         --------->ANAC46  --------->MYB59<-----------GT1     --------->ANAC58     --- ----->ANAC46           --------->ANAC58<<<<<<<<<MYB98<---------ICU4----------->GT1         --------- ------->GT1          --------->MYB52(1)<---------MYB52(1) <-----------------AG            ----------   cgtaaaatctccaccttacacgagtaacgccatgacttgtttgttaggctatctaattttttcctgtaatgggtataacatgcaagtctccatcggtaaa  8537900  Previous    Next  AGI:  At1g24140.1    Description:  matrixin family protein. similar to MMP (MATRIX METALLOPROTEINASE), metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT1G70170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76268.1); contains InterPro domain Peptidase M10A and M12B, matrixin and adamalysin; (InterPro:IPR001818); contains InterPro domain Peptidase, metallopeptidases; (InterPro:IPR006026); contains InterPro domain Peptidoglycan binding-like; (InterPro:IPR002477) Range:  from: 8536034    to: 8537376    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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