Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->SPL7      --------->At5g28300                                                  <---------MYB52(1)     --------->TOE2(3)                              <---------ATHB12      <-------GAMYB     --------->TOE1(3)                            ------>MYB83         ------->TEIL                <-     ----------->GT1         ----------->GT1      ------>MYB46(1)    <---------ABI4(2)           ---- ------>YAB1      --------->YAB1             <-----------GT1         <-------TEIL   <---------CCA1(2)   tcaaaaaccgtaacacagactgataaccagaaggtaataacatcgattcaccaaatgactcagccaatagatgcaccgttgaatccatctcttcatgtct  8506400                                               <---------ARR14(2)                                               --------->ARR14(2)                                              --------->GLK1(1)                                     <                                              <---------GLK1(1)                                    --                                          --------->ANAC58                                        ---                                          --------->ANAC46                                        ---                         <-------TEIL  <---------ARR14(2)                                        <---          <---------ALFIN1    <---------ARR11(3)                                                -----        --------->DEAR3(2)    --------->ARR11(3)   ------>ZmHOX2a(1)  --------->HSFB2a(2)       -----       --------->PCF2  --------->ARR14(2) <---------ANAC55(2)     <---------GLK1(2)             ----- --------CCA1(2)       <---------ARR14(2) --------->ANAC58      <---------TOE1(3) <---------MYB52(1)< ----->YAB1       <------ZmHOX2a(2)    --------->ARR14(2)      <-----------GT1  <---------ICU4-------   cataactcgaacccacatcgatccagattcaagctcttgaaaatacgcaaatccttcaagagttttaagcttctctaactcatcgttactcaaaaacctc  8506500   --------->ANAC58   --------->ANAC58   --------->ANAC46  --------->SPL7 ---------SPL7           <---------ANAC55(2) ------->LBD16           ----------->GT1                                                            < ------>ANAC46           --------->ANAC55(2)                                                        - ------>LBD16            --------->ANAC46                                                           < ------LBD16     --------->HSFB2a(2)                                      <---------ETT(2)          - ->MYB46(1)      <---------HSFB2a(2)                                 --------->At4g35610            < ---->MYB52(1)   --------->HSFC1(1)--------->LBD16                   <---------At4g35610            - ->MYB83       ------>ZmHOX2a(1)  --------->LBD16                <-----------RAV1(1)               <- ---------MYB52(1)      >>>>>>>>>>AtSR1                       --------->GLK1(2)              -------- -->AtMYB61--------->ARR14(2)    <---------LBD16             <---------GLK1(2)          <------ZmHOX2a(1)   ccggtacgaaacgattcctctagaaacgcgtaattcccggtcgatttagagttttcttctccagtttctgtagctgtcgaaactgaagaaggagggaaag  8506600                                                                                         <------MYB83                --------->At5g28300                                                      <------MYB46(1) -----------ARR10                                                                        <---------MYB46(3) -------->ARR14(2)                                                                      <---------AtMYB61 ---------ARR14(2)                                                                     <--------P ------>TEIL  <---------DEAR3(1)             <---------ARR11(3)                 --------->ATHB12 ---------ARR11(1)                           --------->ARR11(3)                 <---------MYB46(3) -------->GLK1(2)       <-----------GT1     <---------GLK1(1)                 <---------MYB52(1) --------ARR14(1)  ----------->ARR10        --------->GLK1(1)     --------->ANAC58    <-------GAMYB -->DOF2     <---------At4g35610   <---------ZAT6                 --------->ANAC58<---------WOX13(1)-   cgaatctgagattggagcggtgagatttacacgagtagagtaatggatatctatgtgaagaagacgagaagccaaacttcgttgattgggttggtttgag  8506700                                       ----------->HVH21                                   <------NtERF2                                  ------>NtERF2                                  <---------RAP2.6(3)                                 --------->RAP2.3(3)                                 --------->RAP2.3(2)                                 --------->ANAC46                                 --------->DEAR3(1)                                   --------->ZAT18                                 --------->RAP2.6(2)                                --------->ZAT14          ---------->DOF2       --------->ERF1                                   <---------ANAC46      ------->GAMYB             --------->RAP2.3(1)                            <---------ZAT14   ----------->RAV1(1)      ---------->DOF2                                 <---------MYB46(3)   --------->MYB52(1)<---------At4g35610            --------->ANAC46   >>>>>>>>>ARR2*TSS    --------- -------->GLK1(2)    --------->At4g35610          <---------ALFIN1   <---------YAB1<---------ZAT6   agaatcaacagagaaagctagtgagatgcttaaagccgccattgacacacacacacacgattttctccgatttgattgtggttcagtgttcgctaatctg  8506800                           ------->GAMYB             ------>NtERF2        <---------At4g35610                        --------->MYB52(1)           --------->LBD16--------->YAB1                    --------->DAG2                   <------NtERF2  <---------ICU4          <---------AHL20(2)                        --------->DEAR3(1)    --------->At4g35610          --------->AHL20(2)                     --------->ANAC46  <---------ATHB12 --------->ATHB12  <-----------GT1  ---------->DOF2           ---------->DOF2       --------->ICU4  --------->ICU4 >GLK1(2) --------->AHL20(1)             <---------ICU4<----------DOF2   ------->TEIL     <---------ZAT18   tttataacgaaataaaatggataaagtaacagtcatacactaatctttaaaacgccgcgttttgaactaatcatgaagctcagtagttattgggccctta  8506900                                    --------->ANAC58                                    --------->ANAC58                          ------------>MYB.PH3(1)                                                  <-                      <---------TOE2(3)                                                            --                <---------AHL20(2)  --------->ANAC46                                               *TSS              ----------->TBP----------->GT1                               ----------->TBP     ------     --------->ARR14(2)  <---------ARR14(2)                              <-----------TBP <---------ICU4     <---------ARR14(2) <------ZmHOX2a(1)                         <------------CBF   <---------AHL20(2)   tggcccatatactgatataaaaatgaggaaactgttataagccagtagctatttgggcttaaggcccatattgcgatatatatagttttaatttttccga  8507000                                                ------>ZmHOX2a(2)                                                ==============HOX2a_HOX2a                                               ===============HOX2a_HOX2a                                              <---------ARR14(2)                                              ------->TEIL                                        <------NtERF2                                       <------NtERF2                                      --------->ANAC58                                      --------->ANAC58                                      --------->DEAR3(1)                                      --------->RRTF1(2)                                      --------->RRTF1(3)                                      --------->DREB2C(2)                                      --------->RAP2.3(3)                                      <---------ATERF1(2)                                      --------->RAP2.6(2)                                      --------->RAP2.3(2)                                      --------->ATERF1(2)                                     --------->RAP2.3(1)                                     --------->ERF1                                    --------->ATERF1(1)                                    <---------ATERF1(1)                                    <---------DREB2C(1)                                    --------->DREB2C(1)                                   <---------SPL7  <---------ZAT2                                   <---------ATERF1(1)                                  <---------DEAR3(1)                                  <---------RAP2.6(2)                                 --------->SPL7<------ZmHOX2a(2)                                 --------->RAP2.6(3)   <------ZmHOX2a(1)                         ==============================HOX2a_HOX2a                         <------ZmHOX2a(1)    --------->ARR14(2)                         =============================HOX2a_HOX2a     <------NtERF2                       --------->ALFIN1------>NtERF2<-----------RAV1(2) <---------ZAT18            --------->At4g35610 =======================HOX2a_HOX2a    --------->At4g35610            <---------At4g35610 ======================HOX2a_HOX2a     <---------At4g35610 <---------DEAR3(1)   ================================HOX2a_HOX2a    <---------ATERF1(1) --------ARR14(2)     <------ZmHOX2a(1)<---------RAP2.6(3)   <---------DEAR3(1)                     < ------->ARR14(2)     =================================HOX2a_HOX2a<------NtERF2         <------ZmHOX2a(1) --->LBD16<---------HSFB2a(2)   <------ZmHOX2a(1)  --------->ZAT2------>NtERF2    <------ZmHOX2a(1)<-   agttcggcgatttcagaagacggaggaggagcgaggacggccgccatggatccagcaggagcatcggtggccagcgcaatcggaggagaaggagagaaat  8507100                                                        <-----------HVH21          --------->ICU4                     --------->ZAT14         <---------KAN4(2)                   <---------ZAT14      --------->SPL7     <------NtERF2                    <---------At4g35610       <---------SPL7         ---------->ID1    <---------MYB46(3)              <---------------------WRI1 <---------ANAC58 <---------ALFIN1  <--   <---------ANAC46                --------->LBD16     ------>ZmHOX2a(2)      --------->LBD16     ---   --------->ALFIN1              <---------LBD16     <---------ARR14(2)      --------->ANAC46    <--- ---------DEAR3(1)   ----------->HVH21--------->At4g35610      <---------ANAC58<---------ALFIN1  ---- --------LBD16<---------AHL20(2)--------->MYB52(1)   --------->ARR14(2)  <---------ALFIN1<----------DOF2   tcgcggtggggaatatttattcagtgaaggtgatcaccggagatgagttcagagggatcgtcatggcttacgaccccatccccaacttcgtcttttttga  8507200            <---------AHL20(2)            --------->AHL20(2)          --------->TOE2(3)                             --------->ARR11(3)          <----------DOF2                          <---------YAB1  ------>ZmHOX2a(1)                               <-----------GT1 --------->TOE1(3)                            <XXXXXXXXXXXXXXXXXXXXMIR161.2 --------->TOE2(3)                          --------->ANAC55(2)         <---------ZAT6 -------ARR11(3)                           --------->MYB59<---------ANAC58               --------->ATHB12 ------>ARR11(3)                     <---------TOE2(3)  <---------ARR11(3)     --------->TOE2(3)   <- ------GLK1(1)              --------->YAB1 <---------TOE2(3) <---------WRKY18(1) ----------->HVH21<-- ----->GLK1(1)      --------->MYB52(2)  --------->CCA1(2) <---------ANAC58   <---------YAB1  <-------   tatccttaatttctttaattgtttgtttcatcaaaatttgagatttaggtattttcaatgtcttgacctgaattgtgttatccttgacgagttattggtt  8507300  Previous    Next  AGI:  At1g24040.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to unknown [Populus trichocarpa] (GB:ABK96063.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 8503766    to: 8506784    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g24050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70220.1); similar to unknown [Picea sitchensis] (GB:ABK26986.1); similar to Os02g0741900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048085.1); contains domain PTHR13542 (PTHR13542) Range:  from: 8506999    to: 8508853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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