Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------DOF5.7(2)                                                    --------->MYB52(1)                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                                  <------ZmHOX2a(1)       ------------>AtMYB77                                            --------->ANAC58  ------->GAMYB                                         <-----------------AGL1--------->At5g28300                                         ----------------->AGL1--------->DOF5.7(2)                 <-                                       <---------WRKY18(1) --------->MYB52(1)            <---------ATHB12 -->TOE2(3)                      --------->DAG2  --------->ANAC58        ----------->HVH21<---------ICU4 -At5g28300   ---------->DOF2   ---------->DOF2  --------->ANAC58   ---------->DOF2 --------->ANAC55(2) --GT1    --------->ICU4     --------->YAB1 --------->ANAC58  ----------->GT1 <-------GAMYB       ---   gatcaaattgtaacgatgaagcccaaacttagcataaagtttgaccaagacaggaaacggataacggtaacaaagttgacagttataggtaatcagtccc  8483500                                                               --------->ANAC58                                                               --------->ANAC58                                                               ----------->RAV1(1)                                                               --------->ANAC46                                                          --------->MYB46(3)                                                         --------->CCA1(2)                                                         <------ZmHOX2a(2)                                                        --------->AGP1                                                        <---------ARR11(3)                       <--------P                       <---------ARR14(2)              <---------ARR14(2)                        --------->ARR14(2)   --------->WOX13(1)         --------->AtLEC2     <---------TOE2(3)         --------->ARR11(3)  ------>ZmHOX2a(2)    <-----------HVH21<---------MYB46(3)             ---------->DOF2       <---------ARR11(3)       -- --------WRKY18(1)  <---------AtMYB61            --------->TOE2(3)        --------->ARR11(3)      --- -------->HVH21----------->RAV1(2)               --------->TOE1(3) ---------->DOF2           --------   atgacccgtccatgcatacctggtggtagtttaatgttctctatatcgaaaccctaaagatccaccagcaaaagatgatctatcagtccatataaacact  8483600                                                                                         <<<<<<<<<ARR2     <------ZmHOX2a(2)                                         ----------->GT1           <---------ATHB12     ================HOX2a_HOX2a                       <------ZmHOX2a(1)            --------->YAB1 ------->DAG2                         --------->YAB1   --------->YAB1      <----------ID1<---------YAB1 ------->DOF2                  --------->ANAC58      <---------TOE1(3)     ----------->GT1--------->YAB1 ->ZAT6       ------>ZmHOX2a(1)--------->ANAC58      <---------TOE2(3)  ---------->DOF2  <<<<<<<<<ARR1   aaaagcgatcaatttcctctaattgttgtcaagaagccattaagaactcagatttaaggataattttgtgaaacaaaaggaaaaaatcacaatcatagat  8483700                                                                                      --------->LBD16                                                                                      ------>NtERF2                                                                                      <---------At4g35610                                                                                      <------NtERF2                                                                                      --------->At4g35610                                                                                     ----------->RAV1(1)                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.3(2)                                                                                     --------->RRTF1(2)                                                                                    --------->RAP2.3(1)                                                                                    --------->RRTF1(1)                                                ------>NtERF2                      --------->LBD16                                               --------->ANAC58                    --------->At4g35610                                               --------->ANAC46                    <---------ATERF1(1)                                               --------->ANAC58                    ------>NtERF2                                            ----------->HVH21                     --------->DEAR3(1)                                           <----------DOF2                        <---------ALFIN1                                      ------>ZmHOX2a(1)                           --------->ANAC46                                  --------->GLK1(1)                             <---------ATERF1(1)                                  <---------GLK1(1)                             ------>ZmHOX2a(1)                                 --------->ARR14(2)                            <---------ALFIN1                                 <---------GLK1(2)                         ------->GAMYB  ---------->DOF2                <---------REM1(1)<---------ARR14(2)                     <-----------GT1<------NtERF2   aacaaaacaattaagaagatgaaggaattacatcggattcctccgcttgacgccaatagtctctctgtacattgtaaccctcctccgccgcagaaaggga  8483800                                                                                              -------                                                                                              <------                                                                                        <-----------RAV1(1)                                                                                        <---------ANAC46                                                                                    --------->ARR11(3)                            --------->At5g28300                 *TSS<------------CBF--------->AHL20(1)               <---------GLK1(2)    <----------DOF2            --------->TOE2(3)    <---------AHL20(1)            --------->YAB1 ----------->GT1                    ----------->GT1   <---------AHL20(2)       --------->LBD16     <---------DEAR3(2)                 <---------ANAC55(2)   <---------AHL20(2)    ------>ZmHOX2a(1)     <---------At1g77200                 --------->ANAC55(2) <---------TOE2(3) ------>ZmHOX2a(1)        <---------DEAR3(1)               <---------ARR14(2)  --------->AHL20(2)   ctcctcctccgtagtcatattcttctcgtcggtgaatactttgtgtttttttgttatggcgattacgttatattgaagtgaattaatattttgtgggatt  8483900                                ------------>CBF                                  --------->AHL20(2)                            <---------DAG2--------->YAB1                       --------->AHL20(2)                            <----------DOF2                                    <---------AHL20(2)                      <---------MYB52(1)  --------->ATHB12                    --------->ICU4                     <---------At4g35610 <---------YAB1              <---------YAB1 -->ARR14(2)         <-------GAMYB   --------->AHL20(2)         --------->ANAC55(2)<---------AHL20(2) ---ARR14(2)       <-----------RAV1(2)<---------AHL20(2)        --------->YAB1<---------AHL20(2)   cgatgtattcatttatgggcttcagttgggctttttcaattttatgattagaatttaagaacccatacataatgaatgaaattatttaatacatagataa  8484000                                                   <---------TOE1(3)                                                   <---------TOE2(3)                               <-                                              --------->ICU4                                      <--                                          --------->ZAT14                                         ---                                          --------->ZAT18         --------->GLK1(2)    <------------MYB.PH3(2)                                          <---------ZAT14         <-----------ARR10    --------->MYB46(3)    --------->YAB1 <---------ALFIN1       <---------ZAT18        <---------GLK1(2)   --------->MYB52(1) <----------DOF2----------->HVH21 --------->AHL20(2)  <---------ARR14(2)           <---------MYB52(2)   tttctttcataagattgcctcacacattgtctctaagaaaatagtgcaatattgaggttccaactcagaatctcatctacttcaaactaacaaactcaga  8484100                                                     <---------MYB52(1)                                                   <-----------------AGL3                                             <---------ALFIN1                                            -------->P                                            ------>MYB46(1)                                            ------>MYB83                                          --------->AtMYB61                                          ------->GAMYB                                         <---------MYB55(2)                                         --------->MYB46(3)                                         <---------MYB52(2)           <---------ARR11(3)           -------->P------>MYB83           --------->ARR14(3)           --------->ANAC58           <---------GLK1(2)            --------->ANAC58           --------->ARR11(3)          --------->WOX13(1)                     <---------YAB1           <---------ARR14(3)    <---------WOX13(1)================================================== --------AHL20(2)               <---------ANAC58  ------>MYB46(1)     <---------AHL20(2) -------AHL20(2)                <---------ANAC58--------->DEAR3(1)    --------->AHL20(2) ------>AHL20(2)  <---------ZAT6<---------ANAC46--------->AtMYB61   --------->YAB1                 --   ttaattttctcaagattttggtgttactagtattgcttgatcaaccaacacctcccttatttgaagccaaatataaatttctgatagaaactgcttagta  8484200                                                                              --------->ARR11(3)                                                                            <---------YAB1                                                                          --------->CCA1(2)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                            ------>MYB83               <------MYB83                        <---------ANAC46    ------>MYB46(1)            <------MYB46(1)                        <---------REM1(1) <---------MYB59            ================================                     <-----------RAV1(1)  --------------->AGL15      <--------P           --------->AtLEC2               <---------------AGL15     <-------GAMYB                 <--        <---------ARR11(3)               ----------------->AGL1    <---------MYB46(3)             <--        --------->ARR11(3)               ----------------->AG      <------MYB83                   <--    ---------->DOF2 <-------MYC3       <-----------GT1            <---------AtMYB61               === =========================================================MADS_MADS<------MYB46(1)                <-- --------->RAV1(1)  ------->MYC3 <----------DOF2        <-------TEIL=================================   gcgacataaagacattcaaacatgtgttgtagatgctttttttaccaaatagtgaatgttcatttgatttggttggatatgattttgaagacaacttgtg  8484300                      --------->AHL20(2)                     <---------YAB1                     --------->ICU4           <---------ICU4                                            ------>MYB46(1)       <------ZmHOX2a(2)                                             ------>MYB83      <---------ARR11(3)                                            --------->MYB55(1)      --------->ARR11(3)                     <------ZmHOX2a(2)     <---------MYB111(2) =======MYC_MYB --------->ANAC55(2)          =========================HOX2a_HOX2a -------ANAC58  ----------->GT1             <---------ARR11(3)     <---------MYB59 -------TGA1a----------->TGA1               --------->ARR11(3)     <---------MYB46(2) -------ANAC46  --------->bZIP60(1)        <---------GLK1(1)       <---------MYB111(1)            --- ===============================================bZIP_DOF          --------->ANAC55(2) <----------DOF2 -------ANAC58  <---------bZIP60(1)  <----------DOF2              --------->ANAC46  ================= =======MYC_MYB <---------ANAC46  ------>NtERF2                ------>ZmHOX2a(1)    <---------------AGL15   acttgagagatcatcgtgacgttattatttagaaggcgactttggagatcatcgtgagagttctcctcacctaactcactcgaatgctcttttgggagaa  8484400  Previous    Next  AGI:  At1g23970.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23950.3); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462) Range:  from: 8482002    to: 8483864    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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