Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------MYB52(1)                                                    <---------ANAC55(1)                                                    <---------ANAC58                                                    <---------ANAC46                                                    <---------ANAC55(2)                                                    --------->ANAC55(2)                                                    <---------HSFB2a(2)                                                <---------GLK1(1)  <---------STY1(1)                      <---------ZAT18          <---------ZAT6      --------->STY1(1)              ---                      --------->ZAT18    ------>MYB83--------->LBD16                           ------ ------>P             --------->ZAT14    ------>MYB46(1)       --------->ANAC58              -------- ---->MYB83           <---------ZAT14   <---------ALFIN1       --------->ANAC46            --------->ZAT6 ---->MYB46(1)      <-------MYC3       --------->MYB46(3)      --------->ANAC58  --------->HSFB2a(2) ------MYB59        ------->MYC3   --------->ANAC46 <---------ANAC58             <---------HSFB2a(2)   ctactcttatcaagagaagtcatgtgcactcgcttacaagacccacctagagttccgtaaactacaagcctagggcctatgttctgaaacctcacagtaa  8405900                                 <---------At4g35610                       <---------ANAC58                       <---------ANAC55(2)                       <---------ANAC55(1)                       <---------ANAC46                       --------->ANAC55(2)        --------->TOE1(3)                       <---------ANAC58           --------->TOE2(3) <-----------GT1                    ------>ZmHOX2a(1)         <---------ARR14(2) ----------->GT1 ---->GAMYB     <-----------GT1  --------->At4g35610           ---------->DOF2               -------- --->MYB52(1)   <---------ARR14(2)        <------NtERF2    <-------TEIL   <----------DOF2   <-------- ->At5g28300    --------->ARR14(2)  <-----------RAV1(2)   --------->CCA1(2)    ---------->DOF2   ctgactcgactgtattagtatccttacgtgtaattagctcaggcagagtataccttagagatacagaaagtaacttctttgaaaagctaaacttatcaga  8406000                        --------->GLK1(2)                       <---------ARR14(2)                       --------->ARR14(2)                 --------->GLK1(2)                 ------->TEIL                 <---------ARR14(2)               --------->DAG2  <-----------HVH21              --------->ANAC58        <---------ANAC46           --------->ANAC58          --------->ANAC58              --------->ANAC58    --------->RAP2.6(3)  ---------->DOF2                     --------->ANAC46     ------>ZmHOX2a(2) <---------GLK1(2)      --------->YAB1  --------->WRKY18(1)          --------->ANAC58 --------->ICU4  --------->ARR14(2) ------->GAMYB---------->DOF2 --------->ANAC58   --------->GLK1(1) ->YAB1       --------->ANAC46   --------->MYB52(1)<----------ID1--------->O2       <---------GLK1(1) -YAB1   --------->MYB46(3)   --------->YAB1 <---------ZAT6  <-----------HVH21     <---------GLK1(2)   gccatgatccaacaacacgaatccagattctaacataacggcatgtactgataaagccaaagcagtcaagtcactggtatcgccagatttctcaagcaat  8406100                                                     <---------ALFIN1                                                 <---------ZAT2                                               <---------ZAT18                                             --------->At4g35610                                             <---------At4g35610                                             <------NtERF2                                          --------->ATERF1(1)                                  <----------DOF2--------->At4g35610                                <                                  --------------->AGL15                                 <-----------GT1                                  <---------------AGL15                                --------->GLK1(1)                                 <---------ANAC58--------->ZAT2                        --------->HSFB2a(1)                            <----------DOF2<---------DEAR3(1)                          <---------GLK1(1)                           <---------DAG2 <------NtERF2                               --------->ARR14(2)                     --------->ANAC55(2)<---------RAP2.6(2)            --------->PCF2 <-----------ARR10                     --------->ANAC46  --------->At4g35610 --------->ATHB12        --------->ANAC46 -                  <---------ZAT18<---------ANAC58<---------At4g35610 --------->ZAT14 <---------GLK1(2)        ---------->DOF2 <-----------GT1<---------At4g35610<-------TEIL --------->ARR14(2)<-----------GT1   acatttttcaaaaagaatggttcacttaaccttttgcttttagcggcagcgagctccacatccattggcactggaccctctatacccgaatttcccctct  8406200                                                                      --------->DREB2C(2)                                                                      <---------ALFIN1                                                                      ------->GAMYB                                                                      --------->DEAR3(1)                                                                     --------->DEAR4(2)                                 <---------LBD16                   ------->GAMYB                        <---------ICU4                             <---------ALFIN1                        --------->ATHB51               <---------ARR11(1)           <---------ZAT14     <---------ARR14(2)      --------->ARR14(2)        ----------->RAV1(2)    --------->ARR14(2)      <---------ARR14(2)    ------>ZmHOX2a(1)   --------->ATHB12               --------->GLK1(2)  <---------HSFB2a(1)  --------->ICU4                  ------->TEIL--------->AtMYB61  --------->HSFC1(2)   <---------YAB1                 <---------CCA1(2)------>NtERF2  --------->HSFB2a(1)--------->YAB1           <---------ARR14(2)  <---------MYB55(2)  ------>ZmHOX2a(2)  -------->ATHB1           --------->ARR14(2)  --------->MYB46(3)  <---------HSFC1(2) <--------HAHB4    --------->ARR14(2)         <---------MYB52(2) <------ZmHOX2a(2)   <---------ICU4    <---------ARR14(2)        -------->P ---------ARR14(2)  <---------ATHB12   --------->GLK1(2)       --------->MYB46(3)      <------------CBF -------->ARR14(2)  --------->ICU4 --------->LBD16    <---------ARR14(1)      <-----------GT1   tggatccttcgcctggactggaatcattatttgaatccgcgaatccagtatccatcgaatcttgaacaaccaccgccttgtttctctccgattgtgaagc  8406300                                                                                              <------                                                                                          <---------MYB52(1)                                                                                         <------NtERF2                                                                                        --------->MYB55(2)                                                               <-------TEIL             <---------MYB46(3)                                                           <---------------AtSPL8      <---------ANAC58                   <---------ETT(2)                     <---------ZAT14                <---------ANAC58                 --------->LBD16                        --------->ZAT14                <---------ANAC46         <-----------ARR10        --------->ARR11(3)    --------->REM1(2)             <---------LBD16      ------------>CBF            <---------ARR11(3) <---------ANAC55(1)       ------->TEIL<--------P     <-----------GT1         <-----------GT1         <---------ANAC46------->TEIL<------------CBF   tagggtttcacaatcttcccgtcgatacaaattacaaatcttttaaaatttcattaagtgtagagtacatgtatatagatgtatattgggcgggtagttt  8406400                                                                  ------>MYB83                                                                  -------->P                                      <------MYB83           --------->ARR14(2)                                      <------MYB46(1)        <-----------ARR10                                     --------->MYB111(1)     --------->AGP1                                     <---------MYB46(3)   --------->HSFB2a(2)                                     --------->MYB55(2) ------>MYB46(1)                                     --------------->AtSPL8  <---------ARR14(2)           ------------>CBF          <---------------AtSPL8  <---------ARR11(3)          <-----------GT1        <---------AtMYB61      ------>MYB83       --------->YAB1<----------DOF2<---------ANAC46-------->P<------ZmHOX2a(2)      >>>>>>>>>SARD1      --------->AHL20(2)       <----------DOF2     <-----------GT1------>MYB46(1)    >>>>>>>>>CBP60g ---ZAT6  --------->YAB1      <----------DOF2     <---------MYB111(1)   <------ZmHOX2a(2)         ---   taggcccattaataacaatttagctatatgggcctttggtgggtacttactacttaccatccagatccaacccgatcgattagagaaatttggaatgtct  8406500                 <-------TEIL                      <-----------HVH21                <--------P                        <---------ANAC46              <------MYB46(1)             <--------P     --------->HSFB2a(2)                --------->ATHB12                                        <----     <---------HSFC1(1)              --------->YAB1--------->LBD16   <----------DOF2        ---------     <---------HSFB2a(2)      <----------ID1<------MYB83     <---------ARR11(3)      --------->MYB52(1) --------->CBF<------MYB83  ---------->DOF2 <------MYB46(1)  --------->ARR11(3)    --------->MYB46(3)   ctcaattctcgaaggaaggttgatgagagtgaaagacaaacatggttggcctccgtgagagaagttctcaacttttactgagagaaccaatggaatattt  8406600                                                 --------->GLK1(1)                                         <---------ICU4                                         -------->ATHB1                                         --------->YAB1                                         --------->ATHB12                                         <--------ATHB1                                        <---------ATHB12                                        --------->ICU4                              <---------DEAR3(1) <---------bZIP60(1)      --------->AHL20(2)                           ----------->HVH21  <---------YAB1              <---------AHL20(2) <---------YAB1        --------->ATHB12 <---------YAB1           <---------ANAC46                  <X -----AHL20(2)        <-------TEIL    --------->WOX13(1)       ----------->GT1                    --- >ICU4         --------->AHL20(2)    ------------>ATHB5       <---------AtMYB61          <---------YAB1   attctaatagttcaaaataaaacattcatttgacggtgagcaatcattgtgatatcaaaacgagatggtgtattatttaaatgatacaaatgttattgcg  8406700                                       --------->REM1(1)                              <---------ANAC58          --------------->AGL15        --------->bZIP60(2)          <---------------AGL15      ----------->RAV1(1) XXXXXXXXXXXXXXXXXXXMIR426    <---------ANAC58             --------->YAB1                      ------ -------->GT1                 <---------ANAC46     <---------MYB52(1)                          ------   aagtataaatttctaaaatatgtatgaaaatttcgtttgcaacatcacagtccgtttgcaaacatgaaatctaagagcaatagaaacaaaatataagaag  8406800  Previous    Next  AGI:  At1g23770.1    Description:  F-box family protein. Identical to Putative F-box protein At1g23770 [Arabidopsis Thaliana] (GB:Q9ZUB9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G23780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73524.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 8405203    to: 8406255    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g23780.1    Description:  F-box family protein. Identical to F-box protein At1g23780 [Arabidopsis Thaliana] (GB:Q9ZUB8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G23770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73524.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 8406675    to: 8408514    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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