Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <<<<<<<<<<<<<AGL25     <-----------------AGL2  <----------DOF2 ---------YAB1                                                                        <---------ANAC46 --------ARR11(3)                                                                --------->YAB1 ------->ARR11(3)                                                                <---------ICU4 --->YAB1                                                                        -------->HAHB4 --->ATHB12              --------->AHL20(2)                                      --------->ATHB12 -->HAHB4                <---------AHL20(2)                                      <--------ATHB1 ----ICU4              <---------AHL20(2)                                       <---------ATHB12 -->ICU4       <-------GAMYB                                                    --------->ICU4 ---YAB1      ----------->GT1               ---------->DOF2             <----------DOF2 -ICU4--------------->AGL15              --------->TOE2(3)    <---------ANAC58  <---------YAB1 >YAB1<---------------AGL15           <-----------GT1         <---------ANAC58 <---------TOE2(3) <---   ttatctttctattttggggttatatataaaaatagaagtttaaccaaaatgcaactcgagatgggcttgaatcactttgttaatgattgtggagaagaaa  8401600                                           <-----------TGA1                                           <-----------HVH21                                          --------->ANAC55(2)                                          <---------ANAC46                                          <---------ANAC55(2)                                          <---------ANAC58                                          <---------ANAC58                                     <---------ICU4            ----------->HVH21        --------->ATHB12            --------->ALFIN1        <---------YAB1        <---------ZAT14             --------->ICU4        --------->ZAT14           <---------bZIP60(1)     <----------DOF2           <---------YAB1     <---------ANAC46             --------->bZIP60(1)    <---------ANAC58          <---------AHL20(1)   <---------ANAC58             <------------------ATHB9 <---------ANAC58     --------->AHL20(2)   <---------ANAC46          --------->ALFIN1     <---------WOX13(1)        <----------DOF2   <---------ANAC58          <---------ANAC58  <---------YAB1             ---------->ID1        <---- --------RAV1(1)             <---------ANAC58  --------->ICU4         <----------DOF2   <---------CCA1(2)   tgttgtcgtgtgaagtgatgggacttcaaatgtgtgtcatcattgcgtcatgactgatggcttcttggtttcctttgtcttttaatatgtttatcttctt  8401700                          ------->TEIL                          --------->ARR14(2)                          --------->MYB52(1)                          <---------ARR14(2)                       --------->ANAC55(2)                       --------->ANAC55(1)                       --------->TGA1a                       --------->ANAC58                       <---------O2                       <---------TGA1a                       --------->ANAC58                       <---------ANAC55(2)                       --------->O2                   <-----------HVH21                 ------>ZmHOX2a(1)                <---------ANAC58                                 --------->YAB1                <---------ANAC58                          --------->MYB52(1)          ----------------------->TaNAC69(2)          --------->YAB1  --------->AHL20(2) <-----------------AGL1          <---------YAB1           ----------->GT1 -------GT1   ---------->ID1         ------->TEIL   --------->AHL20(2)   <---------YAB1   acatttttatatgtttgtccttgtcacgtatcggtaatgaaacttcaaacttgatataataaacgaataataggtatgaatactaaaatagttagtgaag  8401800                                                                        ------>ZmHOX2a(1)                                                                        <----------DOF2                                                               <----------DOF2                          ------->TEIL                        <---------ANAC58                 --------->DAG2                           <---------ANAC58                ---------->DOF2                --------->ZAT18<---------ANAC58                     <-            ------>MYB46(1)            <---------ZAT6     <---------ANAC58                       <---            ------>MYB83 <---------CCA1(2)    --------->ALFIN1<---------ANAC46                 ------           ----------->RAV1(1)     <---------YAB1    --------->ICU4  ---------->ID1    <---------At4g35610         --------->MYB46(3)  <----------DOF2<---------ANAC46 <---------ZAT18     <----------DOF2-----   aaacagtttctaccaacaaaaagtaatgtatcttttcatgagtgttaagtgggcaatgtttagtgcgtttagtcctttttagtctttagagctgtttcct  8401900                                               <---------YAB1                                              --------->AHL20(2)                    <-------TEIL                                              <---------AHL20(2)              <------------CBF       ------>ZmHOX2a(1)                   --------->ARR11(3)                --------->ATHB12 --------CCA1(2)                           <---------ARR11(3) ----------->HVH21<---------WOX13(1) ------CCA1(2)                            <---------RVE1(1) ----------->GT1 --------->ICU4 --->TOE2(3)                      <---------AHL20(2) <---------ZAT6         <---------YAB1 ->ZmHOX2a(1) --------->YAB1     --------->AHL20(2)  ----------->GT1      <------------CBF  ---------   tatctcttcctcttaatcaaaattttctaatacgatttattcagagattttaatagagtaaaatgtgacatttcggtattgattgattcatagattaaaa  8402000                                                                                 <---------ALFIN1                                                                                ------>MYB83                                                                                ------>MYB46(1)                                                                                -------->P                                                                               ----------->RAV1(1)                                                                              --------->AtMYB61                                                                    --------->YAB1 ----------->TBP                                             <---------AtLEC2--------->MYB46(3) >AHL20(2) <---------MYB46(3)      *TSS              --------->ANAC46  <-----------GT1   actatataagccttggttccaacttccaacttccaacttagaaatgtgtatatacacacatttgcatcgataataactcaccaacactctctctgtctcc  8402100                                                                  <---------O2                                                                  --------->ANAC58                                                                  <---------bZIP60(1)                                                                  --------->bZIP60(2)                                                                  --------->bZIP60(1)                                                                  <---------TGA1a                                                                  --------->ANAC58                                                                  --------->TGA1a                                                                  --------->O2                                                                  <---------ANAC55(2)                                                                  --------->ANAC55(2)                                                                <-----------GT1                                                              <-----------HVH21                                                           <---------ANAC58                                                           <---------ANAC58                                  --------->ANAC58      <----------DOF2               --------->ZAT6     --------->ANAC58      ====================bZIP_DOF          ------>ZmHOX2a(1)    --------->LBD16    --------->At4g35610                    --------->TOE2(3)   --------->HSFB2a(1)    ---------->DOF2         <---------At4g35610                    --------->TOE1(3)  <---------TOE1(2)       ==================================================bZIP_DOF     <---------MYB59   atcgaatgtttcctctaactctcaacaaaaatgcgcaaacaatttgtttttcttctgcctttcttgtcacgtctctaccatgtaagtcaaacctaaatcg  8402200             --------->MYB52(2)             <---------MYB46(3)                              <-----------GT1      <---------YAB1           <---------MYB52(1)                    --------->ATHB12        <----------DOF2      --------->ARR14(2)                        <---------AHL20(2)   --------->KAN4(2)      <---------ARR14(2)                        --------->AHL20(2)<---------MYB52(1)    <------------------------ANAC81          <---------GLK1(2)  <---------ANAC46<---------ICU4   ttcatttgaatccgtttgtttcatttctctataatcgattcacttcagattttattggatttgtttccgtttattcttttgatcatttttgaaatttttg  8402300                                                     <---------ARR14(2)                                                   <---------MYB46(3)                                                   <---------DEAR3(2)                                                  <---------DEAR3(1)                               <------ZmHOX2a(1)------->GAMYB                            <------NtERF2    --------->MYB52(1)                         <---------LBD16   <---------MYB52(2)                     ---------->DOF2       --------->MYB46(3)                       ---------->DOF2                 --------->MYB111(1)   <---------MYB52(1)   <---------LBD16      --------->ANAC58  --                 --------->MYB111(2)  --------->At5g28300 <-----------GT1        --------->ANAC58  --                 --------->MYB46(2)  ----------->GT1 --------->ARR14(2)     --------->ZAT14        --                <--------P --------->LBD16 <---------MYB46(2) --------->LBD16    --------->ANAC46  <-               <---------MYB52(1) --------->MYB52(1)<-------GAMYB          <-----------HVH21<--------   taacttccaacaatgcaggtagttatagccggaggagaacggttaactaacggcggtttttcaccggagataaatccgttcacacccaaagcgtctttag  8402400                                                                                      --------->LBD16                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                                                                                     --------->DEAR3(1)                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                                 --------->ATERF1(1)                                                                                <---------RAP2.3(1)                                                                                <---------ATERF1(1)                                                                               --------->DEAR3(1)                                                                               <---------DEAR3(1)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                             <---------ATERF1(1)                                                                             <-----------HVH21                                                                             ------>NtERF2                                                                            --------->DEAR3(1)                                                                            --------->O2                                                                            --------->RAP2.3(2)                             --------->MYB46(3)                             <---------O2--------->DEAR3(1)                 --------->AGP1                                            --------->RAP2.3(1)            --------->MYB52(1)    --------->ANAC46                         --------->ERF1------>NtERF2          --------->MYB46(3) <---------ATHB12                              --------->RRTF1(1)     <---------HSFB2a(2)    ------>MYB46(1)                               ------>NtERF2 <---------ALFIN1     --------->HSFB2a(2)   --------->WOX13(1)                            --------->DEAR3(1) <---------MYB52(1) --------->WOX13(1)                                  --------->MYB46(3) ------->ANAC55(2) <-------TEIL  <---------LBD16                        --------->DEAR3(2) --------->AtMYB61 ------->ANAC58  <---------ARR14(2) --------->ZAT2                     <---------At5g28300<---------ZAT2 ------->ANAC58  --------->ARR14(2) <---------ZAT2                <---------ALFIN1--------->DEAR3(1) --------ANAC55(2)<------ZmHOX2a(2)--------->LBD16             --------->REM1(1)------>NtERF2 --DOF2   <---------MYB52(2)------>MYB83           ------>ZmHOX2a(1)   -------->P<------NtERF2   tacgttactggaacaaacagatccatcaccaatcacccggctcagcctttctcctctccaaggcttcaccacttaccgccgtcgcctccgccaccttcgc  8402500  Previous    Next  AGI:  At1g23760.1    Description:  JP630; polygalacturonase. Identical to Probable polygalacturonase non-catalytic subunit JP630 precursor (JP630) [Arabidopsis Thaliana] (GB:P92982;GB:Q9S9K5); similar to BURP domain-containing protein / polygalacturonase, putative [Arabidopsis thaliana] (TAIR:AT1G60390.1); similar to BURP domain-containing protein / polygalacturonase, putative [Arabidopsis thaliana] (TAIR:AT1G70370.1); similar to Polygalacturonase-1 non-catalytic subunit beta precursor (AroGP1) (Polygalacturonase converter) (PG converter) (GB:Q40161); similar to unnamed protein product [Vitis vinifera] (GB:CAO66055.1); similar to unnamed protein product [Vitis vinifera] (GB:C Range:  from: 8402035    to: 8404290    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version