Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->GLK1(2)                                                ----------->GT1    --------->YAB1                                          <------ZmHOX2a(2) ------ANAC58              <---------YAB1                  --------->ARR11(3) ------ANAC46           <-------TEIL                       <---------ARR11(3) ------->GT1        <---------ICU4                --------->ANAC58    --------->YAB1 ------ANAC55(2)   --------->ICU4                 --------->ANAC46   <---------ATHB12 ------ANAC58    --------->YAB1                   --------->ANAC58   <<<<<<<<<ARR2 >AHL20(2)    --------->YAB1--------->YAB1  --------->GLK1(1)        <<<<<<<<<ARR1        <---------ARR14(2) -AHL20(2)    ----------->GT1               <---------GLK1(1)        <---------YAB1       <---------ZAT14   cgtaaaaaataatctatagtaataagttcatcatagaaatagtctgatatccaagacagaagatcaatacaatcatagtaaaacttagagtgtatactta  8395100                                           <<<<<<<<<GT-1                                        --------->YAB1                                      --------->AHL20(1)                                     --------->YAB1                                     --------->AHL20(2)                                  <---------ICU4                                  --------->YAB1                          <---------------------WRI1                                 <---------YAB1                <------MYB83                                 --------->ICU4                <------MYB46(1)         --------->YAB1                               --------->YAB1         --------->YAB1      <---------TOE2(3)                               <---------ICU4        <---------ATHB12    >>>>>>>>>WRKY18                <-------TEIL--------->YAB1 <-----------GT1   <--------P<---------WOX13(1)          --       ----------->GT1     <---------AHL20(2)        --------->ICU4  --------->ATHB12---------->DOF2   aaatttagagagtcaaaattcatcactgtttaataataataatattaaccatgtaatcatctagttggtattcattgacgaaaaaacaaaagtaattgaa  8395200                                            --------->YAB1                                          <                                           --------->ICU4                                           <                               --------->ANAC58                                                     <                               --------->ANAC46            <------MYB83                            <-                               --------->ANAC58  ------->TEIL            <----------DOF2        <----                               <---------ANAC55(2)         <------MYB46(1)                     <-----                               --------->ANAC55(1)        <---------AtMYB61            <---------ARR11(3)                              <---------LBD16 <---------YAB1         <-----------GT1   <---------AHL20(1) ------->YAB1<---------ARR14(2)--------->ANAC55(2)     <-----------RAV1(1)             --------->AHL20(1)   atcaaaatcaagaccgatacagaacatggagacacggaagaaaaaatgatgaatccattgttggtgtctattttcctttgttccctcaaaatattctaat  8395300           <-----------GT1                  <---------AHL20(2)     <---------ANAC46                       --------->AHL20(2)     ----------->GT1    <---------MYB52(2) --------->AHL20(2)    <------NtERF2  --------->AtLEC2       <---------YAB1 ---------MYB46(3) --------->ANAC58    <---------AHL20(1)          <-----------GT1 ------MYB83  --------->ANAC46         <---------AHL20(2)         ---------->ID1          <---------YAB1 ------MYB46(1)--------->LBD16         --------->AHL20(1)        <-----------GT1 --------->LBD16 --------AtMYB61   --------->ANAC58    --------->AHL20(2) <----------DOF2       --------->ANAC46   -- -------RAV1(1)------>NtERF2<---------ANAC55(2)           <---------DAG2     -------->P  <---------TOE2(3) ----TOE2(3) <---------LBD16--------->ANAC55(2)   --------->AHL20(2)  <----------DOF2  <---------AHL20(2)   gttggtggggttttttccgccatgcaaaaaacgtattgcattttattaaaaaaaaaatccctttttttttctctttactaacccgaaaatttatgtttgg  8395400                                                                                              -------                                             --------->TOE2(3)                               <-------                                            ----------->GT1                                  <-------                                       <---------AHL20(2)                                    <-------                                  <---------AHL20(2)                                         <-------                               --------->AHL20(2)                                     ------------>CBF                              <---------AHL20(2)                                   --------->YAB1                     <---------ZAT6--------->AHL20(2)                  <---------HSFB2a(2)   <-------                   <---------At5g28300 --------->AHL20(2)  <------ZmHOX2a(1)     --------->ANAC58             <----------DOF2  --------->AHL20(2)         --------->MYB59         --------->ANAC58 --------->GT1    <-----------GT1 --------->AHL20(2)   <<<<<<<<<MYB98  --------->HSFB2a(2)  <--------   atagcaaaaacattccttttttacagttagaaataaataaataaaatcgtcaaatttgttaggaatttttcttctaaaaaaacaagcatacaattccggg  8395500                  ------>ZmHOX2a(2)                  =========================HOX2a_HOX2a                 ==========================HOX2a_HOX2a                 <------ZmHOX2a(2)                <-----------ARR10                <---------ARR14(3)                --------->ARR14(3) --------->YAB1 <---------GLK1(2) -->LBD16       --------->ARR11(3) --ANAC58       --------->ARR14(2) --ANAC46       <---------ARR11(3)       <---------STY1(2) --ANAC55(1)    --------->AGP1           --------->STY1(2) --ANAC58       <---------ARR14(2)   --------->ALFIN1 --LBD16       <---------CCA1(2)    <------ZmHOX2a(1)                                     --------->YAB1 -LBD16  <-----------HVH21 ----------->TBP    *TSS                              <---------ICU4   taatgagaaaatgtcacagatcttcggctataaatagaggagtagctagagagcatcttcttatatcaactaaactttgtattcatttccaagtatcact  8395600                                                                                       <---------ARR11(3)                                                                                       --------->ARR11(3)                                                                                     <---------YAB1                                                                                   --------->YAB1                                                                                  <---------YAB1                                                                                  --------->ICU4                                                                                <---------ICU4                                                                                --------->YAB1                                                                               --------->ICU4                                                                               <---------YAB1                                <---------ANAC46     <----------DOF2         --------->YAB1                               <-------TEIL         <---------ICU4          <---------YAB1               <---------ARR14(2)   <---------HSFB2a(2)                   <---------CCA1(2)               --------->ARR14(2)   --------->HSFC1(1)                 <------ZmHOX2a(2)          <--       <----------DOF2------>NtERF2 --------->HSFB2a(2) ---------->ID1<---------ARR11(3)       ------   --------->YAB1    --------->DEAR3(1)          --------->YAB1       --------->ARR11(3) ------>ZmHOX2a(2)   ctaaatcatctttttcgaattcgcctcccaaggtccgtctagaaaactaaatcatcttttcgtttttgtatagatcatatcattatgatgatctcgatct  8395700                                                          <---------YAB1                                                         <---------TOE2(3)                                                  <---------MYB52(1)                               <-                                                 --------->LBD16                          ------->TEIL       <---------ZAT18                       <---------ARR14(2)                        --------->ANAC58       <---------ZAT14          --------->YAB1 <---------LBD16                     <-------TEIL   <--       --------->ZAT14         <---------YAB1--------->ARR14(2)     --------------->AGL15 <---------TOE2(2) --------DOF2         ----------->HVH21     <---------GLK1(1)       <---------------AGL15 <---------TOE1(2) >ZmHOX2a(2)         <-----------HVH21      --------->GLK1(1)       ------>ZmHOX2a(1)  --------->ANAC58   ctttttctgtccactcgtctacatgtgaccgctattatagttttcgatatccggttttttatgttaactccttcatatagctagattcaacgcatgtttt  8395800             <------NtERF2                                                                         --            --------->LBD16                                                                        <-            <---------RAP2.6(3) <---------ANAC58                                                   <-           --------->RAP2.6(2)  <---------ANAC46                                                  <--          <---------LBD16       <---------ANAC58                            -------->HAHB4 --------->YAB1      ---------->DOF2        <---------GLK1(2)              <------ZmHOX2a(1)   --------->ANAC46  --- --------AHL20(2)--------->AHL20(2)                       <---------TOE1(2) --------->YAB1<---------ATHB12 -------AHL20(2) <---------AHL20(2)          <---------ANAC46       --------->GLK1(1)   --------->WOX13(1)   tttatttgtaaagccggaattaattcgaccagtttcttgtatttgtttcttagagtctcttaggaatcggacatctaataatactcaactcaatcagata  8395900                                                                <---------SPL7                                                                --------->TOE1(2)                                                               <---------ANAC58                                                               <---------ANAC58                                                              <---------------AtSPL8                                                      <---------ETT(2)    ------>NtERF2                                                      --------->ETT(2)   --------->RAP2.6(2)                                                <---------ARR11(3)       --------->ANAC46 ------->YAB1                                   --------->ARR11(1)       --------->ANAC58     <------ --------ICU4                                   --------->ARR11(3)<---------TOE1(2)          -------- -------HAHB4                 <---------ZAT6---------->DOF2   --------------->AtSPL3   <---------LBD16 -------YAB1          <---------ZAT6  <----------ID1 --------->DDF1      --------->ANAC58    <------- ------>ICU4      <----------DOF2--------->ATHB12--------->CCA1(2)--------->SPL7 ---------->DOF2    <   atcattttcttatctaaattctttgtgttattgtgttattggaacaaaaagatatgtcgacagagtcgtacgaagacgccattaaaagactcggagagct  8396000  Previous    Next  AGI:  At1g23730.1    Description:  carbonic anhydrase, putative / carbonate dehydratase, putative. similar to carbonic anhydrase, putative / carbonate dehydratase, putative [Arabidopsis thaliana] (TAIR:AT1G70410.2); similar to carbonic anhydrase, putative / carbonate dehydratase, putative [Arabidopsis thaliana] (TAIR:AT1G70410.3); similar to carbonic anhydrase, putative / carbonate dehydratase, putative [Arabidopsis thaliana] (TAIR:AT1G70410.1); similar to unknown [Populus trichocarpa] (GB:ABK94740.1); contains InterPro domain Carbonic anhydrase; (InterPro:IPR001765) Range:  from: 8395546    to: 8398133    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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