Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(1)                                                                              <---------AHL20(2)                                                                           --------->YAB1                                                                          <---------YAB1                                                                   <----------DOF2                                --------->At4g35610              <---------At4g35610                                --------->ZAT2                   --------->At4g35610                                <---------ZAT2      <---------ANAC58      --------->ICU4                                <---------At4g35610 <---------ANAC58    --------->YAB1            <-- ------ZmHOX2a(1)            <---------At4g35610<---------ANAC58 <---------ZAT2             <-------- ---ZmHOX2a(1)       <<<<<<<<<TBF1              <---------ANAC58 --------->ZAT2         <---------MYB52(1)   gaggagcatcataccatggtttcttcttctctgcagctctccaaagttttccttgcttcttagcctcagctttgtcataataaaatgcccgtttattagt  8378400                                                                                          --------->YAB1                                                                                         <---------YAB1                                                                                        <-----------GT1                                                                                      <---------YAB1                                                                                    --------->YAB1                                                                                   <---------YAB1                                     ======================HOX2a_HOX2a      <---------AHL20(2)                                     ------>ZmHOX2a(2)                      --------->AHL20(2)                                    --------->GLK1(1)                       --------->AHL20(1)                                    <------ZmHOX2a(2)                       <---------AHL20(1)                                    =======================HOX2a_HOX2a      <---------ARR11(3)                                    <---------GLK1(1)                 --------->YAB1<---------ICU4                                   <---------ARR14(2)                 --------->TOE1(3)--------->YAB1                                   --------->AGP1               --------->YAB1   <---------AHL20(2)                       <---------WRKY38(1)                   ------->GAMYB  --------->ARR11(3)          <---------At4g35610      <---------AGP1           <---------MYB52(2)  --------->ICU4          --------->At4g35610      --------->ARR11(3)       --------->MYB46(3)  --------->AHL20(2)<--       <-----------HVH21           --------->ARR14(2)     ----------->RAV1(1)<---------AHL20(2)   <-- -------YAB1        <---------ZAT6 <---------ARR11(3) --------->REM1(1)  --------->AHL20(2)       --- -YAB1<-----------RAV1(1)         <---------CCA1(2) ------>ZmHOX2a(1) --------->TOE2(3)<-----------GT1   atcattctctgtcgctgaattagagtcaacattctcagatctcttggactcatcctacaacaacaaacataaccataatatatttattattatcattctc  8378500                        <---------ARR11(3)                        <---------AHL20(1)                        --------->ARR11(3)                       --------->CCA1(1)                                     <------MYB46(1)                       --------->RVE1(1)                                 <---------REM1(1)    -------                     --------->YAB1                                 <-------GAMYB <---------YAB1                     --------->AHL20(2)                            <---------MYB46(3)<---------WOX13(1)                --------->MYB46(3)                       --------------->AGL15 --------->ARR14(2)         --------->AHL20(2)       <---------AHL20(2)     --------->TOE2(3)   <------MYB83     <------         <---------AHL20(2)<----------DOF2               --------->TOE1(3) <--------P<--------P ----- -------ZAT2  <-----------GT1<---------AHL20(2)          <---------------AGL15 <---------ARR14(2) --- -------At4g35610   <---------ATHB12                    ----------------->AG<---------TOE1(2)-------- ------>At4g35610   <---------ATHB51                  <-----------GT1 <---------MYB46(3)  ------>ZmHOX2a(2)   agcttctatatttatttaaccaataatatcttttattttttgacatcaaatgaaatttaccttaagaggctgttgttgtaggttctggttgatccagcca  8378600                                                    ----------->RAV1(2)                                                    <---------ANAC55(2)                                                    --------->ANAC55(2)                                                  <-----------GT1                                               <---------ICU4                                               --------->ATHB51 --------->ARR14(2)                            --------->YAB1 <---------ARR11(3)                            <--------HAHB4 <---------ARR14(2)                            <--------ATHB1 --------->ARR11(3)                           <---------ATHB51 -->MYB46(3)                                  --------->AHL20(2) ---MYB55(2)                                  --------->ICU4      <------ZmHOX2a(1) ------>RAV1(1)                               <---------ATHB12   ----------->GT1 ------>MYB46(3)   <---------CCA1(2)      <---------ATHB12 ---------->DOF2     --------->CCA1(2) ->ANAC46        <---------ICU4          --------->ANAC46<---------YAB1  ----------->TGA1         <--   acaaatcttcgaaatacactcatttctcttgaaaatttagtccaaacaataattacctgatgaaagaaggagaaaatgacgatataagcttgtatatgtt  8378700                                                                                         --------->ANAC58                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC58                                                                               <------MYB46(1)                                                                               <------MYB83                                                                       <---------ZAT18   --------->ANAC58                                                                       <---------ZAT14  <-------TEIL                                                                      <---------ZAT6 <---------ANAC46         --------->ARR11(3)                                          <---------------AtSPL3         <---------ARR11(3)                               *TSS    <---------ZAT14    <---------ANAC55(2)     <---------TOE2(3)                                 --------->AHL20(2)     --------->MYB59     <---------TOE1(3)            <---------ZAT6       <---------AHL20(2)    <---------MYB55(1) <----------DOF2     --------->DAG2                   <---------AHL20(2)    <---------MYB52(1)    --- -------YAB1        ---------->DOF2   <-----------GT1 --------->AHL20(2) ------->TEIL<---------ANAC58   atgctttgaggtatcttagacaaaaagcttgattcagagttaaccaattttcaaaattaaattcagagaatagtgtacgttaggtttacgtacacaagaa  8378800           <---------ZAT2                                        --------->GLK1(1)           <------NtERF2                                   --------->MYB52(1)           <---------At4g35610                 <---------At4g35610 <------ZmHOX2a(2)           --------->ZAT2         <---------ANAC46         ---------->DOF2                          <           --------->At4g35610   <---------TOE1(3)      --------->ANAC58      <-----------GT1       < -------->GT1------------>CBF    <---------TOE2(3)      --------->ANAC58    <---------YAB1         --   cagagaaataggcagctcaattctcatgagttcttaacgtataggtgagagctacttcaagtaaaggagatcgaagttattatctgtttgatttctatag  8378900       --------->YAB1     --------->ANAC58                                     <----------DOF2     --------->ANAC58                               --------------->AtSPL8     --------->AtLEC2                               <---------------AtSPL3    --------->WOX13(1)                              --------->MYB59--------->ANAC58  --------->WRKY18(1)                               <---------TOE2(3) <-----------HVH21                                  <---------------AtSPL8 ------MYB46(1)         <------ZmHOX2a(1)           --------------->AtSPL3 ------MYB83        ---------->DOF2      --------->ARR11(3)        --------->ANAC58 <-----------GT1 ------->MYB59----------->GT1          <---------YAB1   <-------TEIL         <-------TEIL<----------DOF2   ataggtcaagcaaaatttgtataaaaggatgcagtttctatatgattttgcagtaaggtacttttacacaaacaatagattcatttatacactttgtgaa  8379000                                                     <---------At4g35610                                                    ------->TEIL                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                   <---------CCA1(2)                               <---------ZAT14 <---------ANAC46                 <---------TOE1(3)     <----------DOF2        <---------ZAT18        --------->ZAT14 <---------ANAC58                                ------        --------->ZAT18   <---------At4g35610  <---------ANAC58                                ------   ---------->DOF2       <-----------GT1      <-------TEIL                       ---------->DOF2   acttgtaaagagccctcttatggtttttagctgttcactgactttacattcgtgtatctgatttagatgaatgatgcctctgtaaaagaatggataatgg  8379100                                                                                               <-----                                                                                          ===========                                             --------->MYB52(1)                           <----------             ------>MYB83             --------->KAN4(2)                                   -----------       --------->MYB46(3)            --------->KAN4(1)                                    <----------DOF2      <------ZmHOX2a(2)              <---------KAN4(1)                              --------->GLK1(2)     --------->ARR14(2)             ---------->TaMYB80                              --------->ARR14(2)     <---------ARR11(3)             <---------KAN4(2)                              <---------ARR14(2)     <---------ARR14(2)       --------->CCA1(2)                                    --------->ARR14(2)     --------->ARR11(3)      <---------ARR11(3)                 <---------TOE2(3)  <---------GLK1(2)     --------->AGP1       =========================================================================== --->YAB1    ------>MYB46(1) --------->ARR11(3)                ---------->DOF2   ----------->ARR10<-- ----->GT1--------->ANAC46<---------------AGL15             <----------DOF2 ---------->DOF2    <-----   tgatttagatccaccaaattcaaaaaaacaatatatggaatattcacaaacggagtgcctctctttaaagatggagcacaaagcagattctgcttttaag  8379200                                                                                ------>ZmHOX2a(2)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                            <---------YAB1                       <---------AGP1                                     --------->YAB1         ------>ZmHOX2a(1)                                                <---------ICU4         =======================HOX2a_HOX2a ------->GAMYB          <---------KAN4(1)<---------------AGL15        <---------ALFIN1 ------>ZmHOX2a(2) --------->MYB46(3)      --------->KAN4(1)--------->HSFB2a(2) ----TOE2(3)        <--------P            --------->ANAC58        <---------KAN4(2) <---------HSFB2a(2) ===================================================================================================MADS_MADS -----AGL15  ---------->DOF2              --------->ANAC58     <---------TOE2(3)=================HOX2a_HOX2a ---->AGL15<-----------HVH21        --------->ZAT2    --------->ANAC58   <---------YAB1 =====MADS_MADS    <-------GAMYB    <---------ZAT2    --------->ANAC58 --------->YAB1              -- ---------HVH21   <---------MYB46(3)--------->At4g35610 ------->GAMYB <-------TEIL  --------------->AGL15 ----TOE1(3)--------->WRKY18(1)     <---------At4g35610--------->MYB46(3)--------->ICU4   <------ZmHOX2a(1)   ggtcactgctcctcgtcaagcggttgatctgttcttctagctgcaaccaagtttgcaaccaagttaagaatattcatgatgatctactagaaggagaaga  8379300  Previous    Next  AGI:  At1g23690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66084.1); contains InterPro domain Protein of unknown function DUF220 (InterPro:IPR003863) Range:  from: 8377251    to: 8378758    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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