Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 ----                         --------->At5g28300                                        --------------->AtSPL3                      <---------At5g28300                                     <---------TOE2(3)  <---                      <---------TOE2(3)                                       <---------TOE1(3)  ----                     --------->MYB52(1)    <---------ARR11(3)            --------->ATHB12  <---------                     <---------DOF5.7(2)   <-----------ARR10         --------->ARR11(3)   <---------DAG2 --------->LBD16   <---------ATHB12        --------->GLK1(2)         <---------ARR11(3)<---------CCA1(2) ------>ZmHOX2a(1) <---------MYB52(2)      --------->ARR11(3)    ---------->DOF2 --------->GLK1(1)   atcctgaaaatgcaaaatccaattaacggtgagtctagaggtcaaaatctaccgataactcactaactaaagaactcattgaggtttccatacctttcca  8376700                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                             <---------RVE1(1)                                                                            <---------ARR14(2)                                                                            --------->ARR14(3)                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                                                                            --------->ARR14(2)                                                                            --------->AGP1                                                                            <---------ARR14(3)                                        <---------ICU4                    ----------->ARR10                                        --------->YAB1                   --------->SPL7   --------->At4g35610    --------->ARR11(3)                        <---------At5g28300   <---------At4g35610    <---------ARR11(3)                     <---------ANAC58 <-----------RAV1(2)     <---------GLK1(1)                       <---------ANAC58    <---------ANAC58 ------At4g35610  --------->CCA1(2)     --------->ATHB12     <---------HSFB2a(1)     <---------ANAC58 ----->At4g35610 <---------ARR14(2)    <---------ATHB12      --------->HSFB2a(1)     <-------GAMYB ------ZAT2      --------->ARR14(2)--------->AHL20(2)        <---------HSFC1(2)     <---------MYB46(3) ----->ZAT2<---------ARR14(2)   <----------DOF2              --------->HSFC1(2)<----------DOF2 -DOF2 >>>>>>>>>TBF1     --------->GLK1(1)          --------->CCA1(2)   <---------MYB52(1)          -   gcttcagaagaagaattcggatatgggatatcatcttttaaatcattaagagggatatagagaagtttcttaccgtaagatctttttggttgtcttcgac  8376800                                                   <----------DOF2     ------>NtERF2                                             --------->CCA1(2)        --------->ANAC46                                            --------->ARR14(2)     --------->ARR14(2)                             ---------->DOF2<---------ARR14(2)     <---------ARR14(2)                     --------->LBD16       <------ZmHOX2a(1)    --------->LBD16                    --------->HSFB2a(2)  --------->LBD16       --------->ANAC58                     <                    <---------HSFB2a(2) <---------HSFB2a(2)    --------->ANAC58        --------->REM1(1)                --------->GLK1(1)       --------->HSFB2a(2)    --------->ANAC46      ------>ZmHOX2a(1)                <---------At4g35610     <---------LBD16       <---------LBD16       --------->TOE2(3) -------->YAB1  --------->At4g35610 --------->GLK1(1)       --------->AtMYB61  <-------TEIL         <   aattagacttgttgggagagctccagaaaacaaaaggaatttccaggatacaactttctctacctccgcaatccgcctcggtccatccttcatcaaaagt  8376900              --------------->AGL15              <---------------AGL15                                                 <---------ANAC58              --------->TOE2(3)                                                     <---------ANAC58          <----------DOF2                                                           <---------ANAC46         <---------ANAC58                                                   ------>NtERF2         <---------ANAC58                                                 --------->At4g35610   --------->ATHB12                        <---------ANAC58              <---------ATERF1(1) ---------ANAC58             <-----------GT1                            <---------DEAR3(1) ---------ANAC58 --------->YAB1            <---------ANAC58 <---------YAB1<---------At4g35610   tttcttgatttgctttccttcataagaaaaatcacactcttaagtacttgcaatattgtattcttcttgactcttcggctccatttgcttgcacaaacgt  8377000                                                                                            ---------                                                                                            ---------                                                                                        --------->YAB1                                                                                     --------->TOE2(3)                                                                                     <---------------AGL15                                                                                     --------------->AGL15                                                                                    -----------------                                                                                    <----------------                                                                                    -----------------                                  ------->GAMYB                                     <----------------                                -------->P                                          -----------------                       <----------DOF2                                              -----------------                       <---------DAG2    --------->MYB46(3)                         <----------------                     <---------------AGL15                                       <----------DOF2                     ================================================================================                     --------------->AGL15          ------->TEIL             <-----------GT1---------                     ================================================================================MADS_MADS                    <---------ALFIN1     <---------MYB111(2)     <----------DOF2<---------DAG2  -----   tttgaatatatgtatagtcgctccactttatagcaaccctccaacaacttcatgaacatcatcttctctttcttatattttgcctttccataataagcaa  8377100 >ANAC58 >ANAC58 >AGL3 -AGL2 >AGL2                         --------->AHL20(2)                                             <------ -AG                          --------->ARR11(3)                                              ------- >AG --------->TOE2(2)        --------->AHL20(1)                                              <------ >AGL1                        <---------ARR11(3)                                     <---------GLK1(2) -AGL3 <---------TOE1(2)      <---------AHL20(1)                                     <---------ARR11(3) =MADS_MADS              ----------->GT1                                             --------->ARR11(3) >ANAC46           >>>>>>>>>>>>>>>>>LFY--------->ATHB12                        <---------ZAT6-------- ------>GT1       <-----------GT1  <---------AHL20(2)                       <-----------GT1<---------MYB52(1)   gataaaacctatgttcagtttcaccaatggaaaatatttattcattgttgtaagggataagtcatatagagaaacttgttactgtaagattttgttagct  8377200       ----------->GT1     <-------TEIL   <---------SPL7  <------MYB83  <------MYB46(1) --------->MYB111(1) --------->MYB59     --------->TOE1(3) --------->MYB46(2)  --------->TOE2(3)                                 --------->ATHB12 <---------------AtSPL8   ===================HOX2a_HOX2a              <---------YAB1 <---------------AtSPL3   <------ZmHOX2a(1)                       --------->ARR11(3) ---ZAT2        <----------DOF2                                   --------->AHL20(1) -->At4g35610  --------->TOE2(3)                                 <-----------TBP  ----------->GT1 ---At4g35610  --------->TOE1(3)      <------ZmHOX2a(2)    <----------DOF2       <-------TEIL ->MYB52(2) <-----------GT1    --------->MYB52(1)     <---------MYB52(2)<------------CBF          <--   gattaggtacggttttacctttaccttaggaattaaggggatcatacaagagaaaaactaactttgtatatattgattgtatgttcgtaaaatgaaattt  8377300                                                               --------->MYB59                     <-                      <---------TOE1(3)                        <---------TOE2(3)                   --            <-----------GT1                                    <---------TOE1(3)                 <--- --------DOF2         <---------TOE2(3)            --------->AHL20(2)  --------->ZAT6         -------   cttttttcaaaaatttacatttttgaggtttagtattccactattcggattaaaaatatagcatttaggtttaatactactaccaaaatagtagaagtgg  8377400                                                                                <---------YAB1                                                                           <---------MYB46(3)           <---------LBD16                                             <---------AtMYB61        --------->CCA1(2)                                         <---------GLK1(2)               ---       --------->ARR14(2)                                         <---------ARR14(2)             ----       <---------GLK1(2)                                          --------->ARR14(2)          ------- ----------->HVH21                      <---------ANAC58          <---------ARR11(3)          ------- --------At4g35610                      <---------ANAC58          --------->ARR11(3)         -------- ------->At4g35610                    <---------YAB1            ----------->ARR10            <------- -----P<---------ARR14(2)          <---------YAB1             <---------At4g35610          --------->TOE1(2) -->ALFIN1--------->ALFIN1 <---------LBD16                    --------->At4g35610         ------>ZmHOX2a(2)   tagatgacagatttgggggtttcaagcgtctcggaacatgatacttgcattttgaatcaatatgagcagatttttggtggttttgatggtgatcccacga  8377500                                                                                                 <---                                                                                              <------                                                                                             --------                                                                                         ------>NtERF2                                                                                         --------->At4g35610                                                                                        --------->DEAR3(1)                                                                                        --------->RAP2.3(2)       ---------->DOF2                                                                  --------->RRTF1(3)     --------->ANAC58                                                                  --------->RAP2.3(1)     --------->ANAC58                                                                 ------>NtERF2 ------->TEIL                           <------MYB46(1)                               <---------ATERF1(1) ------>HSFB2a(1)                       <------MYB83                                  --------->LBD16 --->TEIL        <--------P           <--------P                                     --------->DEAR3(1) -->ANAC58     <---------MYB46(3)  --------->DAG2                           XXXXXXXXXXXXXXXXXXXXX>MIR472 -->ANAC58    <---------AtMYB61    <---------TOE1(3)                --------->AtLEC2 --------->ANAC46 ->LBD16--------->DAG2             <---------TOE2(3)          <----------DOF2       <---------LBD16 --TOE1(2) --------->ALFIN1----------->GT1         >>>>>>>>>>>>>>>>>LFY   <---------DAG2--------->RAP2.6(2)   atgtaccaagaaagtggtggtagattaagaagaaaataaggttggaagtattggtccattgtcactttcgatgcaacctttccttctccgccgctacatc  8377600  Previous    Next  AGI:  At1g23680.1    Description:  contains InterPro domain Protein of unknown function DUF220 (InterPro:IPR003863) Range:  from: 8376676    to: 8377145    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g23690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66084.1); contains InterPro domain Protein of unknown function DUF220 (InterPro:IPR003863) Range:  from: 8377251    to: 8378758    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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