Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 ----         <------ZmHOX2a(1)                                                                       <---      <-----------RAV1(2)                                                                      <-----    <-----------HVH21                                                                          <-----    ------>ZmHOX2a(1)               <-------TEIL                          --------->YAB1 --------->AHL20(2) ---ANAC46              --------->AHL20(2)   ---------->DOF2    <-----------GT1         --------->ICU4   agactccttcaggaggtaatcccagtttaaattctatgttcatatggcaaagaccattttttgttgtcaccttcaaacataaaaaatgtaatgaattaag  8372400                                                                     <------MYB46(1)                                                                     <------MYB83                                                                    <---------AtMYB61                                                                  <-------GAMYB   --------->TOE2(3)                                                                 <-----------RAV1(1)            <---- ------>CCA1(2)                                                  --------->MYB111(2)    --------->TOE2(3) ----->ARR11(3)                                                  <---------MYB46(3)     --------->TOE1(3) ------ARR11(3)                   ---------->DOF2                --------->MYB52(2)     <---------DAG2 ----YAB1            --------->ANAC58                            --------->MYB55(2)  <---------ALFIN1 ----TOE2(3)         --------->ANAC58                      <----------DOF2        --------->TOE1(3)   atatgttttcaaaaacaaaactctagcaattcttcttaaaggcaaaacaaatctaatgagactttgtttgttggtctggtcttaccttcaccttagcagg  8372500                                                                                                 ----                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                           ----------                                                                                           <---------ALFIN1                                                                                          --------->RAP2.3(3)                                                                                          --------->DEAR3(1)                                                                                       ------->GAMYB                                                                                      --------->DEAR3(2)                            --------->At4g35610                                       --------->MYB46(3)                            <---------At4g35610                                      -------->P  <---                            --------->ZAT2                                           <---------At5g28300                            <---------ZAT2                                       <-----------ARR10                         <---------At4g35610                                     <---------ARR14(2)                      ------>ZmHOX2a(1)                                     --------------------->WRI1                <----------DOF2              ------>ZmHOX2a(1)      ----------->GT1 <-----------GT1                <---------DAG2           <-----------GT1     <---------At4g35610 --------->ARR14(2)               <---------ANAC58      <<<<<<<<<SARD1   <---------ALFIN1    <---------ICU4------>NtERF2 --ZmHOX2a(1)  <---------ANAC58      <<<<<<<<<CBP60g ------>ZmHOX2a(1)   --------->ICU4--------->DEAR3(1)   agcatcataccatggatgcttttcctctgcagctctccaaatttctccttctctcctcacttcatctaagtcgtaatatttagtatctaccgcccacaca  8372600                                                                                              -------     --------->CCA1(2)                                                                        ------- ----->At4g35610                                                                             <------- ----->ZAT2                                                                          ------->TEIL   < ->ANAC46                                                                      <---------AHL20(2)<--- --ALFIN1                     ----------->RAV1(1)                             <---------YAB1<-------- ->RAV1(1)   <----------DOF2 --------->REM1(1)            <-----------GT1     <---------WOX13(1) ---- ------At4g35610        ------>NtERF2             --------->YAB1         <---------LBD16    ---------   gcttcagatttagggcttttggactcggcctacaacaaaaaacagtattctatattgattttacttactcggtttccctgattaatggacttgcaactga  8372700                                           --------->LBD16                                       <---------ARR14(2)                                       --------->ARR14(2)                                      ------>MYB46(1)                                    <---------------AGL15                                    --------------->AGL15                                    <---------MYB111(1)                                    <---------MYB59                                   ----------------->AGL3                                   ==================================================================                                   ----------------->AGL1                                   ----------------->AG                                <---------MYB111(2)                                <---------MYB111(1)                               --------->At4g35610   <------ZmHOX2a(1)           <---------At4g35610<---------ZAT18   ================================HOX2a_HOX2a    --------->ZAT18 >GAMYB                        --------->ZAT2   <---------At4g35610 ---->HVH21                    <---------ZAT2   --------->At4g35610 --MYB52(2)                 ------>ZmHOX2a(2)<------ZmHOX2a(1) -----------RAV1(2)         ========================HOX2a_HOX2a ------bZIP60(1)       <---------WOX13(1) <---------LBD16                                   <-------- -At4g35610          --------->ATHB12 ------>MYB83--------->ZAT14                           --------- ----->bZIP60(1)    <---------YAB1 ----------------->AGL2                                   --------- >At4g35610      --------->GLK1(2)-------->P ---------->DOF2                       --------->ANAC46   cctcaggaggctcttcaacattctgattgatccagctaccaaatccaggaagcacactcattttgtataatcgtttagtccataaacgatactaccctaa  8372800                                                                                                -----                                                                                                -----                                     ---------->DOF2                                            -----      --------->ANAC58            *TSS                                                          -----      --------->ANAC58           ----------->GT1                                                -----      --------->AtLEC2          <---------TOE1(3)                                               <----    <-----------RAV1(2)         <---------TOE2(3)                                               ----- =======MADS_MADS            <---------MYB52(2)                                                ------ -------AGL15           <------ZmHOX2a(2)                ------------>CBF                   --------- >TOE2(3)              --------->ARR14(2)        <---------TOE2(3)     <------ZmHOX2a(1)    --------- ------>AGL15          <---------ARR14(2)   --------->ATHB12    ------------>CBF    ---------->DOF2   ttagagccaggcaagagaaaatgacgatccaactaaggtaaaagcttgatttagatttagacaatatacaataggaaatagaaactgaaagaaaacgcac  8372900                                                                            --------->REM1(1)                                                                          ----------->RAV1(1)                                                                       --------->AtLEC2                                                                       --------->ANAC58                       --------->ANAC58                                --------->ANAC46                       --------->ANAC58                                --------->ANAC58 ------>GT1            --------->ANAC46                             ------->TEIL ---->ANAC55(1)     <-------TEIL                                    <-------TEIL ---->ANAC58     <---------ANAC58        <---------DEAR3(2)      <---------ANAC58 ---->ANAC58     <---------ANAC46       <---------DEAR3(1)       <---------ANAC58 ---->ANAC46     --------->ANAC55(2)    <---------RAP2.6(2)      <---------ANAC46 -----ANAC55(2)  <---------ANAC58      <---------ORA47(1)       --------------->AtSPL3     ------>ZmHOX2a(1) ---->ANAC55(2)  <---------ANAC55(2) --------->ZAT18            <---------------AtSPL8    <---------MYB59 ->TEIL         --------------->AtSPL3 --------->RAP2.6(3)      <---------TOE2(3)        --------->YAB1 >ANAC58   --------->ATHB12         --------->ALFIN1            --------------->AtSPL8 ------->TEIL >ANAC58  <---------YAB1        ---------->DOF2            <---------MYB46(3)<---------ARR11(3)   gtaaaaatgtttatgatttacgtacaaggcaaaacaaagtggacggctcgattttcatgagttgttgacgtacatgcaacatctacatgaatcctaactc  8373000                                                       ------->GAMYB                                                       --------->TOE2(3)                                      <---------ZAT18  --------->AtMYB61                           <---------TOE2(3)     <-----------GT1                    --------->AHL20(2)          <---------MYB52(1)   ------->TEIL <---------AHL20(2)              --------->AHL20(2)   <---      ---------->ID1   <----------DOF2--------->ZAT18 --------->MYB46(3)--------->ANAC58   <--------- ------>ZmHOX2a(1)     ------>ZmHOX2a(1)  <----------DOF2               --------->ANAC58   <---------DAG2   atcctcttgtcccttcgtttcaatcctttgatgtatatagttcgctttaatttacaaccacaacaatttttcacaagaaaaaataagaaaatactttttt  8373100                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                      <---------ICU4                                                                                      <--------ATHB1                                                                                      --------->YAB1                                                                                      -------->HAHB4                                                                                      <--------HAHB4                                                                                      --------->ATHB51                 --------->HSFB2a(1)                                                 <---------YAB1           --------->CCA1(2)                                                         --------->ICU4          <---------ARR11(3)      --------->DAG2                                     <---------ATHB51          --------->ARR14(2)     ---------->DOF2                  --------->GLK1(2)  --------->AHL20(2)   ----------->HVH21            <---------AHL20(2)               <---------GLK1(2) --------->YAB1 --------->At4g35610        --------------->AGL15   --------->ARR14(2)          --------->YAB1 <---------At4g35610        <---------------AGL15   <---------ARR14(2)        --------->AtLEC2<------ --------GT1    ------->TEIL------>ZmHOX2a(1)--------->ICU4  ---------->DOF2<---------AtLEC2 -------- -DOF2  ----------->ARR10  ----------------->AGL3  <----------TaMYB80     <---------YAB1 --------->AHL20(1)   cacagttgacaagatttgaacgttctgttcctatataaagttgaggcattagtatatactcacaaaagaatctattatgcatgcataataattaattaac  8373200                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58     --------->ARR11(3)                                                   --------->DAG2     --------->AHL20(1)                        --------->YAB1            ---------->DOF2     <---------AHL20(1)                       <---------ATHB12          <---------AHL20(2)    <---------AHL20(2)                      --------->WOX13(1)      --------->AHL20(2) -----GT1     ----------->ARR10         <-----------GT1             <---------AHL20(2) <----------DOF2 ->AHL20(2)<---------ANAC46     <---------TOE1(2)            <---------LBD16       <----------DOF2   ttctaaatattttgggtagacttgcttaaattcttgggttttttaccaattagtattccgatgttcggaattatataaagtgattctttctttcttcttg  8373300  Previous    Next  AGI:  At1g23660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66084.1); contains InterPro domain Protein of unknown function DUF220 (InterPro:IPR003863) Range:  from: 8371598    to: 8372834    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g23670.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23600.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66084.1); contains InterPro domain Protein of unknown function DUF220 (InterPro:IPR003863) Range:  from: 8373271    to: 8375886    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version