Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>NtERF2--------->ANAC58                       --------->ZAT18               <---------ANAC58           <-------TEIL<---------ZAT18       ------>NtERF2     <---------ANAC58  <---------ZAT14      <----------ID1     <---------ANAC58  --------->ZAT14   --------->ANAC58     <---------ANAC46<---------At4g35610 --------->ANAC58                        --------->At4g35610 -------ANAC58       --------->At4g35610--------->SPL7                           <---------At4g35610 -------ANAC58   <-----------HVH21   --------->ANAC58<---------ANAC58         <------ZmHOX2a(1)------ -----ANAC46    --------->WOX13(1)<---------REM1(2)  <---------ANAC46      <------NtERF2       ------   gggtatggagtgattcatccatcagcggactgtctctactcgcacgacgacaagggcttggaccagactcacaagtcggaggaagccgagactggccacg  8329600                                       <---------At4g35610                             <---------ARR11(3)                                  <---------ZAT6                                       --------->ARR11(3)   <----------DOF2           <---------REM1(1)<---------ANAC55(2)            --------->At5g28300 --->O2                   <---------MYB46(3)  ----------->GT1               ----------->GT1 ----->HVH21           <-----------RAV1(1)    --------->ANAC55(2)     <---------YAB1  --------->YAB1   acgagctttgatggtgatgttcaaactgttgttgtagtgagagatgatatgtaatatagttttctgaagcatatgatacagtaaaaaatgatattgtttt  8329700                          <-------GAMYB                         <---------MYB46(3)             --------->YAB1             --------->TOE2(3)                                             <---------------AGL15            --------->MYB46(3)                         --------->TOE2(3)   <----------DOF2           -------->P    --------->MYB111(2)     <----------DOF2           --------------->AGL15  ---          --------->WOX13(1)       ------->GAMYB<---------DAG2          <-----------GT1    <---------At4g35610      --------->YAB1 <---------TOE2(3)       <---------ALFIN1     <---------AHL20(2)---------->DOF2     <---------YAB1  <---------TOE1(3)      <---------ZAT18  <---------ATHB12 <---------YAB1 <XXXXXXX   tgtgtttataatcaaccatagttaaggttgttgttaacagcatttgtccaccttttacatcaaatgattttttttttcttttcatagaaagtcatatgct  8329800                                                                         ------------>CBF                                                                      <<<<<<<<<SARD1                                                                      <<<<<<<<<CBP60g                                                                     ------>MYB83                                                             --------->ANAC58                                                             <---------ANAC55(2)                                                             --------->ANAC46                                                             --------->ANAC58        ------------>CBF                           --------->LBD16   ------>MYB46(1)   <------------CBF                              <---------LBD16   <---------MYB59           -------- ------>REM1(1)       <----------DOF2         ---------->DOF2--------->ANAC55(2)      ----------->GT1 XXXXXXXXXXXXXMIR862-5P                    --------->TOE2(3) --------->ANAC55(1) <---------YAB1    <-   tcatctattgagcaatggccatcactttgaaaacttacgcttataccataaaccgggttctatacgtaaccaaatttcaatttctgatgggttaataata  8329900                     --------->ATHB12                     <---------ICU4                     --------->YAB1         --------->MYB52(1)           <------------CBF              --------->At4g35610                        <---------ANAC46         <---------AHL20(2)     --------->ZAT14   --------->DAG2                    <---------ANAC58- --------->LBD16    --------->ICU4  <---------HSFB2a(2)                          <----------DOF2    - ->YAB1  --------->AHL20(2)     <---------ZAT14  ---------->DOF2     ---------->DOF2<---------ANAC58< --------LBD16      <---------YAB1  --------->HSFB2a(2)       <-------TEIL  <-----------GT1--------->GLK1(2)   aaccgggtttataaattgggttatgattacacagtataccagaagctaacaaaaagctcaacgattcgtctcaaagtttcacactttcgtgaaattcttg  8330000                                                    <------NtERF2                                                   <-----------TGA1                                                   <---------RAP2.6(3)                                                   ------>NtERF2                                                   <-----------HVH21                                                  --------->DEAR3(1)                                                  --------->ANAC46                                                  --------->RAP2.3(3)                                                 --------->ATERF1(1)                                                 <------NtERF2                                                ------>NtERF2                                                <---------ATERF1(1)                                                <---------RAP2.3(1)                                               <---------DEAR3(1)                                               --------->DEAR3(1)                                              --------->ATERF1(1)                                            <---------ANAC58                                            ===========================bZIP_DOF                                            <---------TGA2(1)                                            --------->TGA2(1)                                            <---------bZIP60(2)                                            <---------TGA1a                                            <---------ANAC58                                            --------->bZIP60(1)                                            <---------bZIP60(1)                                            --------->O2    --------->GLK1(2)                       --------->TGA1a              --------->At4g35610    <---------ARR14(2)                      <---------O2                 <---------At4g35610    ------->TEIL                           ----------->STF1     <---------HSFC1(1)    --------->ARR14(2)                    <---------TGA2(2)     --------->HSFC1(1)           --------   <---------GLK1(2)                     <---------ATHB12       <---------HSFB2a(2)         ---------   <---------CCA1(2)                     ----------->HVH21      --------->HSFB2a(2) --------->ANAC58 -------->HSFB2a(2)                      ----------->TGA1      <---------LBD16      --------->ANAC58 -------->HSFC1(1)              <---------GLK1(1)--------->RAP2.3(1)     --------->ZAT2  --------->AtLEC2 ---------HSFB2a(2)  <-------TEIL    ------------>CBF       <----------DOF2    --------->ANAC46   <--   ttctcgaatctcgtttcatttgatacatttgaagaaatcggcaatgacgtcgccgtcatcgtctttctggaacacagcttcacgagaagccatgaaaagc  8330100                   <---------At4g35610                 <---------ZAT14                             <---------ANAC46                 --------->ZAT18                     --------->ARR14(2)                 --------->ZAT14                 <---------LBD16         <---------HSFB2a(2)             ------->GAMYB <-------TEIL         --------->YAB1<----------DOF2 ->DAG2  --------->HSFB2a(2)            <---------MYB52(2)   <---------ANAC58   <---------ARR11(3) <- ->DOF2---------->ID1   <----------DOF2 --------->MYB46(3)   <---------ANAC58  <---------GLK1(1)  <-- ----NtERF2 ---------->DOF2     --------->ANAC55(2)  <---------ARR14(2)  --------->WOX13(1)   <------   ggcatgtttgtcgcgaaagtctactgctttcttcatgtaacaacaaactatctcggattcatggcttatgtgagtcaatcgaaatctctcttcttttttc  8330200                                                                                       ----------->GT1                                                                                      --------->AHL20(1)                               --------->ICU4                                   --------->LBD16                              <----------DOF2                                  --------->HSFB2a(2)                     --------->YAB1                                            <---------HSFB2a(2) --------MYB52(1)   --------->ICU4                        --------->ATHB12    <---------LBD16  ------ -----GAMYB       ---------->DOF2    --------->ZAT2    --------->YAB1        <---------LBD16   ------ -----GT1      --------->TOE2(3)     --------->At4g35610 <---------YAB1     ------>ZmHOX2a(1)  <-----   cgttaatcgagaattatccataaagatgatgtctttatgagcaggcttatggtccgagcatgattccgacgcttcatccttcgggaaatatgttattagc  8330300       --------->HSFB2a(2)                             <------ZmHOX2a(2)       <---------HSFB2a(2)                             --------->GLK1(1)    --------->ARR14(2)                                <---------ARR11(3)    --------->GLK1(2)                  --------->CCA1(2)    <---------ARR14(2)                --------->ARR11(3)    --------->LBD16   <---------GLK1(2)           <---------ANAC58       --------->ARR11(3)                         <--- --->At4g35610                 <---------ANAC46   --------->CCA1(2)                              <--- --->ZAT2                      <---------ANAC58<---------YAB1      --------->TOE2(3)            <---- ----At4g35610     --------->YAB1     <---------ARR11(3)------>ZmHOX2a(2)                    <-------   tgagagaatctcgaagcggtatcagaaaccgagtcgtggagatatagttgtgatacgatctccagagaaccctaataagactccgattaagagagttgtt  8330400                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                      <---------ZAT14                                  ------>MYB46(1)  <---------REM1(1)              ------>ZmHOX2a(2)                                     ------>MYB83 ---MYB46(1)                <---------WOX13(1)                                    <-----------GT1 ---MYB83                 --------->ATHB12        ------->TEIL                 <---------ANAC55(2) -----AtMYB61            <---------YAB1        <---------YAB1                  --------->ANAC55(2) --MYB46(3)          <----------DOF2  --------->ZAT14    >>>>>>>>>>>>>>>>>LFY<-----------GT1       <-   ggtgttgaaggtgattgtataagctttgtgattgatccagtgaagagtgatgaatctcaaaccattgtggtatgttttgttacttaaccttccttgttga  8330500  Previous    Next  AGI:  At1g23460.1    Description:  polygalacturonase. similar to polygalacturonase, putative / pectinase, putative [Arabidopsis thaliana] (TAIR:AT1G70500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66097.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat (InterPro:IPR006626); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 8327301    to: 8329611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g23465.1    Description:  signal peptidase-related. similar to AGL64, peptidase [Arabidopsis thaliana] (TAIR:AT1G29960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39503.1); contains InterPro domain Peptidase S26A, signal peptidase I; (InterPro:IPR000223); contains InterPro domain Peptidase S24, S26A, S26B and S26C (InterPro:IPR015927); contains InterPro domain Peptidase S26A; (InterPro:IPR014037); contains InterPro domain Peptidase S24, S26A and S26B, C-terminal (InterPro:IPR011056) Range:  from: 8330044    to: 8330927    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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