Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ARR14(2)           --------->ARR14(2)           --------->GLK1(2)       <---------ALFIN1           <---------ARR11(1)      --------->ANAC46           ------->TEIL          <---------ALFIN1                  --------->ZAT14           <-----------ARR10     --------->ANAC58            --------->SPL7          <---------ARR14(1)     --------->ANAC58          <-----------HVH21          <------ZmHOX2a(2)     --------->ANAC46 --------->HSFB2a(2)                  <---------SPL7            <---------ARR14(2)     <---------DEAR3(1)--------->ANAC46         --------->YAB1     <---------ZAT14   --------->ARR14(2)    <---------LBD16   --------->LBD16     ------>NtERF2   --------->DEAR3(1)       ------>ZmHOX2a(2)   <---------ALFIN1   <---------HSFB2a(2) --------->LBD16--------->ATERF1(1)       =============HOX2a_HOX2a --------At4g35610    ------>ZmHOX2a(1) <---------LBD16  <------NtERF2     --------->ATHB12        <- ------->At4g35610 ------>ZmHOX2a(1)  --------->AtMYB61--------->ARR14(2) <---------YAB1 ------>ZmHOX2a(1)   cagctccacggcgaatctatcctcctcgaaatcgcacacacctccggctataatcaggctccgtccgactacagccacgattggatcgatcctccaaact  8310200            --------->ALFIN1            <-----------RAV1(1)            =======================RAV           ------->MYC3           <-------MYC3           <-------MYC2           ------->MYC2           <-------MYC4           <-------PIF5           ------->PIF5           ------->MYC4          <---------O2          ==============================================bZIP_DOF          --------->TGA1a          <---------TGA1a          ====================bZIP_bZIP          --------->ANAC55(2)          =====================================MYC_MYB          <---------ANAC46          <---------ANAC55(2)          <--------ABF1          --------->O2        <---------ALFIN1       <------NtERF2      --------->ABI4(2)      ------>NtERF2     ----------->HVH21     --------->PCF2 --------->TGA1a    <------NtERF2   --------->ANAC58    --------->ATERF1(1)               <---------MYB46(3)   --------->ABI4(2)===========================MYC_MYB   <---------DEAR3(2)                 --------->MYB55(2)           --------->DAG2   <---------ATERF1(1)               <---------At1g77200     <------NtERF2   <---------RAP2.3(1)               <---------DEAR3(1)    --------->DEAR3(1)        <---------ANAC58   <---------MYB46(3)    <---------At4g35610        --------->GLK1(2)                <---------ANAC58   <---------ORA47(2)    --------->At4g35610        <-----------ARR10                <---------ANAC46   <---------DEAR4(2)  <-----------RAV1(2)   ---------->DOF2--------->LBD16       --------->ALFIN1---  <---------DREB2C(2)<-----------HVH21<---------DEAR3(2)  <---------LBD16        ------->MYC3     ---  <---------DEAR3(1)====================================bZIP_DOF  ---------->DOF2<-------MYC3 <------ <---------ABI4(1)  --------->bZIP60(2)<-------GAMYB--------->ARR14(2)          <---------ANAC46----- <------NtERF2      --------->O2   <-----------HVH21<---------ARR14(2)          <---------O2  ------- --------DEAR3(1)   --------->ANAC58<------NtERF2  <---------GLK1(2)            --------->O2 <------ZmHOX2a(1)   ctcggcggtgccacgtgttgccaagtcagatgaaacgcgtcggttgagaaagagaatctcgccggagataaagcgtagagcaacgtggagtgagaggatc  8310300           --------->ALFIN1         --------->O2         <---------ANAC58         <---------ANAC58         <---------O2         --------->TGA1a         <---------TGA1a         <---------ANAC55(2)         <---------ANAC46         --------->ANAC55(2)         <---------ANAC55(1)                          --------->TOE1(1)                             <    ===============MYC_MYB                   <------ZmHOX2a(2)                                   <---    ------->GAMYB                      <---------At4g35610                                      ----- --------->MYB52(1)            <---------ANAC46       --------->TOE2(1)        --------->DEAR3(1)---- ------>ANAC58                <---------DEAR3(1)     <------NtERF2    --------->ANAC46        <------ ------>ANAC58         --------->At4g35610  --------->ARR14(2)        --------->ANAC58        <------ ---ARR14(2)           <---------At4g35610  <---------ARR14(2)        --------->ANAC58     <--------- ->ZmHOX2a(2)    <---------LBD16       --------->At4g35610        --------->YAB1       <------NtERF2< -->ARR14(2)   ----------->HVH21 --------->ALFIN1--------->ANAC46<------ZmHOX2a(2)    ------>NtERF2<-   gagcaacggagacgtgttcgacgggagatgatgcggtgttgagctcgatccaggcctcggacttgggatcataagccatcgccatcgtcgccatggtgta  8310400                                                     <---------SPL7                                                    <---------ANAC46                                                    <---------DEAR3(1)                                                   <---------At4g35610                                                   <------NtERF2                                                   <---------ABI4(1)                                                   --------->At4g35610                                                   <---------LBD16                                                   --------->ATERF1(1)      --------->ARR14(2)                                                  <---------ORA47(2)        <---------ARR14(2)                                                  <---------RAP2.3(1)    <---------DEAR3(1)                                                  <---------DEAR4(2)     <------NtERF2                                                  <---------ERF1        ------>NtERF2                                                  <---------RAP2.6(1)  --------->DEAR3(1)                                                  ------>NtERF2---------->DOF2    --------->ATHB12                                                  <---------ATERF1(1)  <---------ANAC46                                 --------->bZIP60(2)--------->ALFIN1  --------->ATERF1(1)  <------NtERF2                  --------->ANAC58 <---------RRTF1(1)  <------NtERF2 --------->LBD16                 --------->ANAC46<---------RAP2.3(3) <---------DEAR4(2) ---------DEAR3(1)               --------->ANAC58<---------DREB2C(2) <---------ATERF1(1) ------DEAR3(1)                 <---------LBD16  --------->ALFIN1    <---------RAP2.3(1) ---->SPL7                     <---------ALFIN1  <---------RRTF1(3)  <---------ORA47(2) ----->ANAC46                  ------->GAMYB     <---------RAP2.3(2)<---------RAP2.3(2) ---ZAT14                     --------->MYB46(3) <---------RRTF1(2) <---------RAP2.3(3) ---SPL7                     -------->P   <----------DOF2  ----------->GT1<---------MYB46(3) ---------SPL14            --------->MYB46(3)    <---------DEAR3(1) --------->ANAC46 ---------ANAC46      --------------->AtSPL3     <---------RAP2.6(2)<---------RRTF1(3) --------LBD16   <---------REM1(1)     ----------->GT1<------NtERF2 <---------DEAR3(1)      <--------   cggcggagaatttctctggttgtagacgaacaaccacggcatggttttaaggcggcggagggagtaaaagacggcgcggttccatgatttggagacttgg  8310500                                                                   <----------DOF2                                                                  --------->HSFB2a(1)                     ----------->GT1                              <---------HSFB2a(1)                    --------->ALFIN1                              --------->HSFC1(2)                    <---------ZAT6   <---------WOX13(1)           <---------HSFC1(2)          <------                 <------ZmHOX2a(1)  <---------ARR14(2)    <---------WRKY12         <---------ARR11(3)              <---------HSFB2a(2)   --------->ARR14(2)   <---------MYB52(1)       --------->GLK1(1)              --------->HSFB2a(2)  <------ZmHOX2a(1)    <-----------HVH21       --------->LBD16    xx    <---------ARR14(2)        <------ZmHOX2a(1)         --------->LBD16        --------->ANAC46   xxx -O2--------->ARR14(2)--------->At5g28300              --------->ANAC46 <<<<<<<<<TBF1    ------>ZmHOX2a(1)   caagcggaatcgaggtctaggagtggtaaataggagaggattgactcgagtatgtctccgtcaatggaactttcttcttctccgaaatctcctccattgt  8310600         <<<<<<<<<TBF1      <<<<<<<<<TBF1 xxxxxxxxxxxxxxxx>smallRNA(i)                                <-----------TBP <------------------------ANAC81      *TSS---------->DOF2  --------->AHL20(2) -----RAV1(1)                      ---------->DOF2         <-----------TBP               <------MYB83 xxxxxxxxxxxxxx>smallRNA(i)    --------->ZAT18           <----------DOF2                 <------MYB46(1) xxxxxxxxxxxxx>smallRNA(i)     <---------ZAT18     ---------->DOF2        ----------->HVH21    ------   tgttgttcttcttcttctccattttttggataatgcacaaagtctaaaggagggaaagtctttatatatagagagagtgacacagcgaagttggtgatcg  8310700                                                                               <---------ZAT6                                                                              <---------YAB1                                                                            --------->ATHB51                                                                         --------->ATHB51                                     <---------ANAC58                    <---------ICU4                                     <---------ANAC46                    --------->YAB1             ------->MYC3     --------->AHL20(2)                         -------->HAHB4             <-------MYC3     <---------AHL20(1)                         <--------HAHB4             <-------MYC2     <---------AHL20(2)                         -------->ATHB1         <---------ZAT18   <---------AHL20(2)      <---------ANAC55(2)   <---------AHL20(2)      <------------CBF   <---------AHL20(2)----------->GT1              <---------ATHB51     --------->ATHB51   <---------AHL20(1) <------MYB46(1)          --------->At5g28300     --------->ATHB12 <---------TOE2(3)    <------MYB83            ----------->GT1     <---------ICU4   <---------YAB1 <---------ANAC58       --------->YAB1 <---------YAB1    <---------YAB1  <---------AHL20(2)    <---------TOE1(2)<-------TEIL --------->ICU4 <---------YAB1    --------->ICU4  <---------AHL20(2)----------->HVH21  <---------YAB1 >ZmHOX2a(2) ------->MYC2<---------YAB1  <--------P--------->ANAC55(2)--------->YAB1   actcttattattgcacatggaattaatattattttattttcttgtaggttaatatgtgacattcatatacagtaattattattgttagtaacttgagatt  8310800                                                                                               ------                                                                                --------->WOX13(1)                  <------MYB46(1)                                       <---------TOE2(3)     <------                  <------MYB83                                         ---------->DOF2        <------               <---------AtLEC2                                      <---------YAB1   --------->MYB46(3)        ----------->ARR10               --------->MYB52(1)       <---------ANAC46   <-----------GT1<-   gggactaaattagatttggatggtattcttaagcattcaagttaacagagttaactcaatatgtatggagtattaaagttttcaattaacaatccgatta  8310900                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                     <--------HAHB4                                                                     -------->ATHB1                                                                     --------->ATHB51                                                                    --------->ICU4                                                                    <---------ATHB51                                                                    <---------ATHB12         --------->AHL20(2)                                       --------->WOX13(1)    <---------YAB1                                           <------ZmHOX2a(1) --->ATHB12               <---------ICU4            <---------------AGL15                  <---------YAB1 ---ATHB51               --------->ICU4             --------------->AGL15               <---------ATHB12 ---YAB1 <---------AHL20(2) <---------YAB1         <-----------------AGL3<-----------GT1--------->ICU4 --------MYB46(3)        <---------YAB1<---------AHL20(2)  --------->MYB59 <---------YAB1--------->YAB1   ttggttatgaataaaatgacatatgtcattattttagtttttttattcaacttgctcaaattaggaaccaattatttacaattggttcaaatgatgatgc  8311000                                             <---------REM1(2)                                             --------->ZAT14                                             <---------ZAT14                      ----------->HVH21    --------->ANAC46                                        --                    ----------->GT1     --------->ZAT14                                            --               ---------->DOF2          --------->ZAT18               --------->WOX13(1)           --           --------->TOE1(3)            <---------ZAT18           <<<<<<<<<<WRKY18             ------           --------->YAB1               <---------ZAT14           --------->ANAC58            <------           --------->TOE2(3)          --------->ANAC46            --------->ANAC58            <------        <-----------GT1       --------->ANAC46           <-----------GT1<---------ATHB12 --------->TOE2(3)   tacaaggattttaccataaaagaggtgacaaaacacaactactccactacactgtatattttcgagtcaagtcaatgaaacgatagtactatctcaataa  8311100  Previous    Next  AGI:  At1g23390.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At1g23390 [Arabidopsis Thaliana] (GB:Q9LDE3;GB:Q8LGH1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G24760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66108.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70447.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 8309101    to: 8310638    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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