Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <----------DOF2    ----------->GT1                                   <-----------------AGL1   --------->DAG2                                    <------ZmHOX2a(2)  ---------->DOF2                                <---------TOE1(3) -------DOF2                                     <---------TOE2(3)                            ------- ----->TOE2(3)                                  --------->MYB52(1)                           -------- ----------->AGL15           ----------->GT1    <---------DOF5.7(2)                          <------- ------------AGL15 <---------AHL20(2)         --------->DOF5.7(2)  <---------ATHB12          -------- ---ARR11(3)    <---------ARR11(3)      ---------->DOF2  <---------DAG2                     <------ZmHOX2a(1) -DOF2          <---------GLK1(2)   ---------->DOF2------->GAMYB --------->WOX13(1)        ----------   tttaaaaagtaaaacctagattttatctaagtgataaaaaaagaaagagttaacgatcaccttttggcaatcgatgtaagcttgaagtaagcgaggatac  8302200                                                                                         <---------ETT(2)                                                                                       ------>NtERF2                                                                                      ----------->HVH21                                                                                      --------->DEAR3(1)                                                                                    ------>NtERF2                                                                                    <---------ATERF1(1)                                                                  --------->LBD16  --------->DEAR3(1)                                                                 --------->ANAC46 <------NtERF2                                                                <---------------------WRI1   --------                                                             <------ZmHOX2a(2)    --------->ATERF1(1)                                                             --------->GLK1(1)    --------->RAP2.3(1)                                                            <-----------ARR10    ------>NtERF2                                                            --------->ARR11(3)   <---------ATERF1(1)                                                        <---------LBD16  <------ZmHOX2a(2)------>NtERF2        --------->ANAC58                         <---------ICU4 <---------LBD16 --------->RAP2.3(3) <------ZmHOX2a(1)                              <---------YAB1------>ZmHOX2a(2) --------->DEAR3(1) -->CCA1(2)                   <-------GAMYB  <---------YAB1 <---------ARR11(3)  --------->RAP2.3(2) ->ARR11(1)               ------------>AtMYB77--------->YAB1<---------ARR14(2)  --------->RAP2.6(2) --ARR14(2)            --------->YAB1    --------->TOE2(3)  --------->ARR14(2) --------->ATERF1(1)  - ->ARR14(2)         <----------DOF2      --------->TOE1(3) <---------CCA1(2)   --------->RAP2.3(1)  < ->ARR10--------->ANAC58 ----------->HVH21--------->DOF5.7(2)<---------GLK1(1)<---------ATERF1(1)   -   gaaggatgacaagcgattttagctttgatgacagttagagaaacgttatcatcatttcttcggatctccggagcgatcgaagccgcctccgacgacaaag  8302300                                                              <------NtERF2                                                            <---------ANAC46   <---------RAP2.6(2)                                      <---------DEAR3(1)   <---------DEAR3(1)          --------->LBD16             <---------LBD16  --------->RAP2.6(3)        ------>ZmHOX2a(2)           <---------DEAR3(1)  --------->ATERF1(1)       <------ZmHOX2a(2)            --------->DEAR3(1) <---------ATERF1(1)       --------->ARR14(2)            <---------ATERF1(2) -->DOF2                   <---------ARR14(2)           <---------LBD16          <------MYB46(1) ---------->HVH21        <---------DEAR3(2)           <-----------GT1            <------MYB83 ---------ARR14(2)      <---------TOE1(2)      --------->ANAC58           ---------->DOF2         --- -------->ARR14(2)    <-----------HVH21        --------->ANAC58  <------ZmHOX2a(1)          ---------   cggagacggctactgagagtagctcgtcggatccgaaaacatcagagacacgattttcaccggcggaggaacatagcaaagcttggtaatcggaaggaaa  8302400                                                                                                    <                                                                                                    -                                                                                                   --                                                                                              <------                                                                                             --------                                                                                           <---------LBD16                           --------->DEAR3(1)                                            ------>ZmHOX2a(2)                        <---------ARR14(2)                                               ============                     --------->YAB1                                                     =============                    --------->At4g35610             <------NtERF2                       <---------GLK1(1)               --------->TGA2(1)                --------->ORA47(1)                      <------ZmHOX2a(2)               <---------bZIP60(1)              <---------SPL7                          --------->GLK1(1)               <---------TGA2(1)               --------->DEAR3(1)                      --------->ARR14(2)            ----------->HVH21                  --------->MYB46(3)                      <---------ARR11(3)           <-----------HVH21             --------->YAB1                                --------->ARR11(3)          --------->LBD16 --------->DEAR3(2)  --------->At4g35610  --------->KAN4(2)   <---------ARR14(2)          --------->At4g35610------>MYB83<---------ICU4      --------------->AtSPL8    <-----------ARR10          <---------At4g35610------>MYB46(1) --------->MYB52(1) <-----------GT1  --------->YAB1    <- ------>TOE1(2)--------->bZIP60(1)--------->At4g35610        <---------------AtSPL8    <---------ARR14(3) -->GT1 <---------LBD16 --------->ARR14(2)  <-----------GT1  <---------------AtSPL3    --------->ARR14(3)   catgagactctccggtgacatcatcagaaccgacttatctgaataatcaccggccgaatggaaattgtacattccatccataagtataagatctccggta  8302500     ------>ZmHOX2a(1) ---------GLK1(1) -------->GLK1(1) ------->ARR11(3) ---MYB52(1)                                                         --------->AHL20(2) ->LBD16                                                             --------->YAB1          <------- ===========HOX2a_HOX2a  <---------ANAC58                         --------->YAB1             <------- ===========HOX2a_HOX2a  <---------ANAC58            --------->GLK1(2)                  <------------MYB.PH3(2) --------ARR11(3)     <----------DOF2   --------->AtLEC2       >>>>>>>>>TBF1          <-----------GT1   agaactcctccgtcttctaaatcgctttcttgaattgtcttcttgcaaaatcaagaatcgatgaagaagaataatatgaaaccgcttataacaaactttt  8302600                                                                        <----------DOF2                                                                     <---------AHL20(2)                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                                --------->AHL20(1)                                                                <---------AHL20(2)           --------                               --------->REM1(2)                --------->AHL20(2)         <---------YAB1              <---------AHL20(2)                                <---------AHL20(1)       --------->CCA1(2)              --------->AHL20(2)        *TSS              ------>ZmHOX2a(2)             --------->ARR11(3)          --------->AHL20(2)   --------->ZAT14           <------ZmHOX2a(2)              <---------ARR11(3)         <---------ARR11(3)    <---------ZAT14          --------->ARR14(2)              --------->ARR11(1)         --------->AHL20(1)   --------->ALFIN1          <---------ARR11(3)          ---------->DOF2<- ---DOF2 --------->ARR11(3) --------->ALFIN1            <---------ARR14(2) --------->HSFB2a(2)     -- --DAG2  <---------AHL20(1) <---------ANAC46            --------->ARR11(3) <---------HSFB2a(2)   ----   tggttcttgaaaatatttatttctatgggagtgtgtagagagagagagaggctcgagggatcttaatttattttcttttggaagaaaaaagatatgaaag  8302700                                ---------->DOF2                            <---------YAB1                            <---------ANAC55(2)                       <---------ICU4                      <---------YAB1               <---------AHL20(2)               --------->AHL20(1)       ----------->GT1--------->ICU4  ------->GAMYB--------->AHL20(2) -->DOF2  >>>>>>>>>>GT-3b   <----------ID1 --------DOF5.7(2)  --------->YAB1  <------ZmHOX2a(1)        <---------At4g35610               ------ ------->MYB52(1)  ----------->GT1 <----------ID1            --------->At4g35610              <------ ----->DOF5.7(2)   <---------YAB1--------->DAG2---------->DOF2   <-----------RAV1(2)--------->CCA1(2)   ttaacggagaagaaaaataaaatgataattacgaaaaaggacatatgctaaaaggctcaatggagcttcaggcttcataggtcgagataaggccttccta  8302800                                                         <---------RVE1(1)                                                        <---------ARR11(3)                                                  <---------ICU4                                                  --------->YAB1                                                 <---------YAB1                                     -                                            <---------ANAC58                                       <-                                            <---------AtLEC2          <---------ATHB12       <-------     <---------ARR11(3)                     <---------ANAC58--------->AHL20(2)  <---------ANAC46   <-    <---------CCA1(2)                 <---------GLK1(2) --------->ARR11(3)      <---------ANAC58----- >ZmHOX2a(1)                     --------->YAB1 --------->ARR11(3)  --------->WOX13(1)       -------- ---MYB59   ---------->DOF2     <---------YAB1  <---------ARR11(3)<---------YAB1<---------ANAC58<----   acatatatatctaagaaaggtccaaggctgtgttatgatagaatttgcatgatcatgagatttttaatatcaatgaaacatggcgagaaacaaaattata  8302900                                     --------->ICU4         --------->ANAC58            <---------YAB1         --------->ANAC58         <---------YAB1 -------->ATHB12            ---------->DOF2 --------YAB1          --------->ANAC58 --AHL20(2)            --------->ANAC58 --------AHL20(2)      ----------->GT1--------->AHL20(2) ---->AHL20(1)       --------->MYB52(1)   <-----------GT1                       <-----------GT1 ->AHL20(2)    ----------->GT1  ----------->GT1         <-----------HVH21 <----------DOF2 -----AHL20(1)----------->GT1--------->DAG2      --------->ZAT14  --------------->AtSPL8   tattattgaaaacgaaatggaaaaaacggaaaaagtgtgattatttaccagcatactatgtcagtttatttgaactcttttttttctcatcgacaataca  8303000                                           --------->ANAC55(1)                                           --------->ANAC58                                           --------->ANAC58                                           --------->ANAC55(2)                                        --------->ZAT14                                        <---------REM1(2)                                   <---------ZAT14                                 --------->DAG2                                   --------->ZAT14                         <----------DOF2         --------->YAB1       --------->MYB46(3)        ---------->DOF2 <-----------GT1           <--    ----------->GT1         <-----------GT1--------->ANAC46    <---------ANAC46   ---------->DOF2 <--   cttagatggtaacataactactagtacatataaccactaaactacacgcaacttatttgaaagctctgtgtaattttcttttcaaaaagtatagttgatg  8303100  Previous    Next  AGI:  At1g23380.1    Description:  KNAT6 (Knotted-like Arabidopsis thaliana 6); DNA binding / transcription factor. Identical to Homeobox protein knotted-1-like 6 (KNAT6) [Arabidopsis Thaliana] (GB:Q84JS6;GB:Q948K0;GB:Q9LQD4;GB:Q9LR21); similar to KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G70510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66111.1); contains InterPro domain KNOX1; (InterPro:IPR005540); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterP Range:  from: 8297280    to: 8302640    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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