Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ----------->HVH21       --------->At4g35610                                          --------->REM1(2)     <---------REM1(1)       <---------At4g35610                                     <---------ZAT2        <---------ALFIN1 ---------->HVH21                                           ---------->DOF2       --------->ANAC46 ---->NtERF2                                              <<<<<<<GRF7             <---------ALFIN1 -----At4g35610                                         ----------->HVH21        --------->MYB46(3) ---->At4g35610                                      ------>NtERF2  <---------ZAT14 --------->MYB46(3) -->MYB46(3)                                        --------->ZAT18 --------->ZAT14------>NtERF2 -ARR14(2)         <---------WRKY18(1)         ---------->DOF2 --------->ZAT2  <---------ZAT18 <----- >ARR14(2)        ----------->HVH21 ---------->DOF2<---------RAP2.6(2)         --------->PCF2  <-----   ctgcgacgatgctgacaggtttgacctcagagagcgatgaaagtgcaaacaaagcggcctgacaaagctgtgaagagccagtccccaccacgatgtagcg  8274900                                                                              <-------MYC3                                                                              ------->MYC3                                                                              <-------MYC2               <---------DOF5.7(2)                                            ------->MYC2             --------->DOF5.7(2)                                             --------->ANAC58            <----------DOF2                                                  --------->ANAC58            <-----------HVH21                                             ------->GAMYB          ------>NtERF2                                                  <---------ALFIN1       --------->At4g35610                                              ------>MYB83       <---------At4g35610                ===============================HOX2a_HOX2a  <-----------RAV1(1)      <---------MYB46(3)         --------->ANAC58                       ------>MYB46(1)      --------->MYB52(2)         --------->ANAC58                      ----------->RAV1(1)      <---------DEAR3(1)    --------->ANAC58                          --------->AtMYB61   <---------At4g35610    <-----------HVH21       --------->ANAC46                      <------ZmHOX2a(1) <---------ANAC58 ------>ZmHOX2a(1)    --------->ZAT18     ------>ZmHOX2a(2)    <---------HSFB2a(2)  <---------ANAC58 ----ANAC58<---------ANAC58 --------->ANAC58        --------->ANAC58 --------->MYB46(3)   --------->At4g35610 ----ANAC58<---------ANAC58 --------->AtLEC2        --------->ANAC58 --------->DEAR3(2)<-----------HVH21   ttcctcggtcgctgcgttaccgattgcaccatgcaacgccttgatcgccttctcaagctctggctctaggaaccaacacacgttcttcgtgtcgctgaag  8275000                                                                                   --------->At4g35610                                                                                   ------>ZmHOX2a(1)                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                              <---------GLK1(1)                                          <----------DOF2                     --------->GLK1(1)                                          <---------DAG2                     <-----------ARR10                                   ----------->RAV1(2)                       --------->ARR11(3)                                 <---------ALFIN1                            --------->ARR14(2)                         --------->MYB46(3)                                  <---------ARR14(2)               <---------ZAT2   --------->SPL7                               <---------ARR11(3)          ------>ZmHOX2a(2)   --------->ZAT14                               <------ZmHOX2a(1)         <------ZmHOX2a(2)    <---------SPL7                              --------->SPL7        <---------ARR14(2)--------->DEAR3(1)                              <---------TOE1(2)        --------->ARR14(2)--------->AtMYB61                             <---------SPL7       --------->At4g35610<---------ALFIN1------>ZmHOX2a(1)            <---------ANAC46       <---------At4g35610------------------>SPL14                  --------->ANAC58            <----    <---------At4g35610<-----------GT1 ---------->ID1               --------->ANAC58       --------->AHL20(2)   taactcatcagatcccatgctggtatcaccaccgtacacctgtcctttttcttcatccaatactcttgaaacgccgtaggatctcctctgcaaaaaaatg  8275100                <----------DOF2             <---------ARR11(3)            <-----------HVH21             --------->ARR11(3)           --------->ANAC46             <---------AHL20(1)        --------->TOE2(2)            --------->RVE1(1)        ------->TEIL            --------->CCA1(1)     <---------YAB1                    --------->ANAC58         <---------AHL20(2)     --------->YAB1                      --------->ANAC58         --------->AHL20(2)     <---------ICU4                    --------->MYB52(1)                <   --------->ANAC46            <---------ATHB12           <----------DOF2   <---------TOE2(3)    <--- -----------AtSPL8           --------->WOX13(1)        <-----------GT1      <---------YAB1     <-----   agtacaaacaattaatatcttttgtcaaaatccatcatgaatctacgtcaagacgttttactttgacaaaacgaaattaacatagttgatttttagagga  8275200                                                                             <---------ARR11(3)                                                                           --------->ANAC58                                                                     --------->TOE1(1)                                                                    <---------At4g35610                                                                <-----------HVH21                                                               --------->bZIP60(1)                                                               <---------TGA2(1)                                                               <---------bZIP60(1)         --------->YAB1                                        --------->TGA2(1)     ----------------         --------->AHL20(2)                                <---------TOE2(3) --------->ARR11(3) <---- ---------YAB1                                            --------->YAB1--------->WRKY18(1)    ------ ------YAB1   --------->DAG2         <----------ID1     <---------WOX13(1) --------->ANAC58    <----- -ZmHOX2a(1) ---------->DOF2    ---------->DOF2      <---------YAB1 --------->At4g35610       >>>>>>>   ttattatgcaataaaaaaagtgagttttttggtagaaagagaacaaatactgatcaagattgatgatgtcatcggacaagctcttgtcttcgttcgaacc  8275300                                 --------->YAB1                              --------->YAB1                              ------->GAMYB                             <---------MYB55(2)                             <---------ATHB12                             --------->MYB46(3)                            ------>MYB83                            -------->P                            ------>MYB46(1)                           ------>MYB46(1)                           ------>MYB83      --------->GLK1(1)  --------->MYB46(3)                                ------------>CBF ----->WRI1              <---------MYB55(2)                              ----------->HVH21 -----ALFIN1            --------->ANAC46                       ------>NtERF2                        - --->MYB46(3)           --------->ANAC58                     <---------ANAC58                    <--- ----MYB55(2)           --------->ANAC58           <-----------GT1<----------DOF2   --------->YAB1<-- >>>>>>>>>>LFY      <-----------GT1       <---------WRKY18(1)<---------ANAC58   <<<<<<<<<EIN3   -----   actgtctgatttcttcgagttttcacacccaaccatcatcttcttgaccttgtttactctcttgctggctattttgtgacaatgtataagaatgttagtg  8275400                            <---------AHL20(2)                           --------->YAB1                          <---------YAB1                                                 --------->CCA1(2)                          <---------AHL20(2)                                            <---------ARR11(3) ---------->GT1       <---------AHL20(2)                                       --------->DAG2 ---------CBF         --------->AHL20(2)  --------->AtLEC2                   ---------->DOF2      <-- -------WOX13(1)    <-----------TBP       <---------YAB1                --------->ATHB12--------->ARR11(1) ---->ATHB12  <---------ANAC46      <------ZmHOX2a(1)           <---------ANAC46----------->GT1 <----   attggaaaatcgtatggagtctatttatattataacgaggagtcatgaaaacaaataacttatatggagtctattgattaaaaggtaaaagatttgagtt  8275500                                                                                            ---------                                                                                        --------->YAB1                                                                                     -------->HAHB4                                                                                     --------->YAB1                                                                                     <---------ICU4                                                                                    --------->ICU4                                                                                  <--------HAHB4        <---------ZAT2                                                           <---------YAB1        --------->ZAT2                                                           --------->ICU4        --------->At4g35610                                                    --------->YAB1        <---------At4g35610                  <-----------GT1               ------->TEIL<---------YAB1    <-----------HVH21                        <---------AHL20(2)           <---------CCA1(2) --------- <------------CBF               <---------YAB1 --------->ANAC55(2)      <---------ANAC55(2)------>ZmHOX2a(2) -------ANAC46                 --------->AHL20(2)                 ------------>CBF<---------ICU4   -- -----ANAC46                   <---------AHL20(2)      ------------>CBF --------->ANAC55(2)==========   gtgtattgtcagctgtagaaacatatgctccatttttatggtcaaatttacttattcaacaattttgggtcaatatgtatctcataattatgatcgttct  8275600                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                        --------->AHL20(2)      ------>NtERF2          --------->YAB1                                            <---------AHL20(2)     --------->ANAC46  ------->TEIL    <---------HSFB2a(2)                             --------->AHL20(2)     --------->ANAC58  <---------ARR11(1)                                          --------->AHL20(2)     --------->ANAC58  --------->GLK1(2)                                    <-----------GT1 <-------- >KAN4(2)             <---------ARR14(1)               <------ZmHOX2a(1)  <---------YAB1<---------AHL20(2) -------------->TaNAC69(2)--------->WOX13(1)         <---------TOE1(3) --------->ICU4  --------->AHL20(1) ---->ZmHOX2a(1)  --------->MYB52(1)   --------->HSFB2a(2)     --------->WRKY18(1) <---------AHL20(2) =====HOX2a_HOX2a--------->ICU4   <----------DOF2    <---------TOE2(3) <---------YAB1  <---------AHL20(1)   cctaactacgccaaatgtcataacgaatctatcatacttttgtagaaacttacttaaggaatgtggtcaagagattattatctatataatttattttaat  8275700                                                                                                 <---                                                                                               <-----                                                                                            ---------                                                                                           ------->MYC2                                                                                           <-------MYC2                                                                                           ------->MYC3        <---------AHL20(2)                                                                 <-------PIF5    <---------------AGL15                                                                  <-------MYC3    --------------->AGL15                                                                  ------->MYC4   <---------YAB1                                                                          <-------MYC4 <-----------GT1                                                                           ------->PIF5 ----->AHL20(2)                                                                           --------->O2 ------AHL20(1)                                                                           <---------O2 ----->AHL20(1)                                                                           =========== ------AHL20(2)                              <-------TEIL                                 =========== ->AHL20(2)             <---------AHL20(2)  --------->CCA1(2)                             --------->ANAC55(2) --YAB1--------->AHL20(2)                  --------->ARR14(2)                             --------->TGA1a --AHL20(2)            --------->AHL20(2)  <---------ARR14(2)                             <---------TGA1a >AHL20(2)<---------TOE1(3)               --------->At4g35610        <-----------GT1    <---------ALFIN1 -AHL20(2)<---------TOE2(3)               <---------At4g35610  <---------TOE2(2)        <------------OsbHLH66   taattactatttaatgttatttgtatttaatagaattctaagtcagatacacttagataagaacacaggttttactccagcattatgtccccacgtgttg  8275800  Previous    Next  AGI:  At1g23320.1    Description:  alliinase family protein. similar to alliinase C-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64270.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Allinase, C-terminal; (InterPro:IPR006948); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421) Range:  from: 8273412    to: 8275339    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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