Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->At4g35610                   --------->At4g35610                 --------->YAB1                <---------YAB1              --------------->AtSPL8                              -----               <---------ARR11(3)           --------------->AtSPL3                            >>>>>>>               --------->ARR11(3)           --------->ZAT6                <----------DOF2 --------->MYB46(3)          --------->AHL20(2)              --------->MYB52(1)<---------ARR11(3)   <---------ARR11(3)          <---------AHL20(2)        XXXXXXXXXXXXXXXXXXX>MIR775 <----------DOF2   --------->ARR11(3) -   ccaagattgcatataaatatcatcagcatcatccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctcttccaacaatcta  8258300        <---------ARR14(2)        --------->ARR14(2)                                                        ------>MYB83     --------->ANAC46                        ------>NtERF2                        ------>MYB46(1)     --------->TOE1(1)                      --------->DEAR3(1)                  <---------MYB111(1)    ------>ZmHOX2a(1)                       --------->RAP2.3(3)                 <---------MYB59  <---    <---------LBD16                   --------->RVE1(1)                        ----------------->AGL1    --------->LBD16               --------->AHL20(2)     <---------ICU4        --------->ANAC55(2)--- ----->DOF2                 <---------ARR11(3) <---------ALFIN1     <------ZmHOX2a(2)           ----- >>RAP2.2    --------->REM1(1)    <---------YAB1        <---------ATHB12 --------->CCA1(2)      <---- -------->ARR14(2)          --------->ARR11(3)<------NtERF2   <-----------GT1<-----------GT1    -----   aagttcctcggaactacatcacaaaatcaagctcttataaatatcgcccccaaatcaaatcattttacagatcagatatatacctaatcgagaccatgga  8258400                     <---------ARR11(3)                     --------->ARR11(3)                     --------->GLK1(2)      <---------GLK1(2)                                             <------ZmHOX2a(2)  <------ZmHOX2a(2) --------->RVE1(1)                              --------->ARR11(3)           ----- ---ZmHOX2a(2)      --------->CCA1(1)                --------->TOE2(3)            --------->TOE1(2) --->ZmHOX2a(2)   --------->AHL20(2)              ----------->RAV1(1)------>ZmHOX2a(2)         ------ ---->ARR14(2) --------->AHL20(2)             --------->REM1(1)    <---------ARR11(3) --------->HSFB2a(2) -----ARR14(2)--------->AHL20(2)         <---------ICU4            <---------AGP1 --------->TOE2(2) -->TEIL  <---------YAB1<---------LBD16 <---------ATHB12          <---------CCA1(2)   <---------HSFB2a(2)   tccgatcacattctcattaaaaaaatctcggaaacaaatcgaatcactacaacaacataaaaacccctagatctcaaaattcaatctacgagaaggaatg  8258500                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                           <---------TOE1(3)                                                                                      --------->ATHB12                                                                                      <---------ICU4                                   ------->GAMYB                                      <--------HAHB4                                  --------->MYB46(3)                                  --------->ATHB51                                 ------>MYB83                                         --------->YAB1                                --------->MYB52(1)                                   --------->ICU4                               --------->TOE1(2)                               <---------ICU4   -----                               --------->TOE2(2)                               --------->YAB1   -----                    ------->GAMYB------>MYB46(1)                        <---------LBD16    <---------TOE2(3)                   <---------LBD16<---------MYB55(2)           --------->At4g35610   --------->AHL20(2)                  --------->MYB52(1)            ------>ZmHOX2a(1)   ------->TEIL --------->ICU4 -----      ---------->DOF2--------->LBD16       <---------ANAC58   --------->DEAR3(1) <---------YAB1 <---- ---->YAB1        -------->P -------->P    <---------ANAC58--------->DEAR3(1) --------->ICU4   <----- --->ICU4    --------->GLK1(1)--------->MYB46(3)--------------------->WRI1 <------ZmHOX2a(1)<--------   atgaaattgaaagagaaatcaaccggagacttaccaacgaccttggcttcctccgaactcatcgccgatgaatctcaggaataatgaataattagggtta  8258600 ------ANAC46 ------ANAC55(2) ---MYB46(1) ---MYB83 ---->MYB59 ---->MYB111(1) ---->MYB52(2) ---->MYB46(2)                                                                             >>>>>>>>>TBF1 ---->MYB111(2)                                                         <---------ZAT6  >>>>>>>>>TBF1 -----AtMYB61               --------->ANAC58                     ---------->DOF2    --------->At4g35610 ----MYB55(1)               --------->ANAC58---------->DOF2 --------->KAN4(1)    <---------At4g35610 -ZAT6                    ---------->DOF2 --------->CCA1(2)<---------KAN4(2) *TSS--------->At4g35610   ggtgagagagagaattgagcaatagcgaagaagcaatctcagagataaaagagagagagagaatgttcaaagtactgtttgagagcagaagaagaagaag  8258700                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                         --------->ICU4                  --------->AHL20(2)                    ------------>CBF                  <---------AHL20(2)                 <---------MYB52(2)                --------->YAB1                      --------->ANAC55(1)                --------->TOE2(3)                   --------->ANAC58          --------->AHL20(2)              --------->AHL20(1)              --------->At4g35610        ------------>CBF             --------->YAB1                   <---------At4g35610 <---------TOE2(3)--------->TOE2(3)             --------->AHL20(2)     ----------->GT1 --------->ANAC58 ---------->DOF2               <-           --------->AHL20(2)   <----------DOF2     --------->ANAC46<------ZmHOX2a(1)              --   cctttctatagaaaataatattaattaagagagacttttggttaatttagctacaagtaacaattaataaggaaagacaataaaacataaatctcttaca  8258800                                   --------------->AGL15                                   <---------------AGL15                                  <-----------------AGL2                            <-----------GT1                       --------->AHL20(2)                       <---------AHL20(2)                       --------->ATHB51     ----------->GT1                       <---------ICU4     ----------->GT1       <---------AHL20(2)<---------YAB1<---------ICU4    --------->TOE2(3) <---------YAB1   -------->HAHB4  <---------YAB1    ----------->GT1   --------->ICU4   --------->YAB1  <---------TOE2(3)          ----------->GT1   ----------->GT1  --------->YAB1<-----------------AGL3----------->GT1         ----------->GT1 -----  <---------TOE2(3)--------->AHL20(2) --------->ICU4<---------AHL20(2) ------->TEIL    --------->DAG2 --------AHL20(2)  <---------AHL20(2) <---------ATHB51 <---------TOE1(3)  <<<<<<<<<MYB98   ---------- ------->AHL20(2)  <---------YAB1 ===================================================================   tataaatgttaaattctatatataattatttttcaaactaattatggtgaaaaatttatggttaaattctatgtatgttaaatggtgaaaaattggaaat  8258900                         --------->YAB1                         ----------->GT1                     <---------AHL20(2)                    --------->AHL20(2)                  --------------->AGL15                <---------AHL20(2)                                           <---------AHL20(2)             --------->ARR11(3)  --------->ARR11(3)                 --------->YAB1     <----------DOF2             <---------ARR11(3)  <---------AHL20(1)           <------MYB46(1)--------->AHL20(2)   ------>ZmHOX2a(1)<---------AHL20(2)----------->HVH21       <------MYB83--------->AHL20(1) ---->AHL20(2)<---------RVE1(1)  <---------ARR11(3)      --------->ATHB12 <---------AHL20(1)    <<<<< ->GT1       <---------GLK1(2)   --------->AHL20(1)     <------ZmHOX2a(2)--------->AHL20(2)   ------- =================================MADS_MADS    <---------TOE2(3)   <---------YAB1   <---------TOE1(3)   aaatcctgttgaatagattttttttaatagtaaaaaatatttgacatttaagttttggatcatttggttatcaaaatatataatttaagctttggatagt  8259000                                                                                           <---------MYB46(3)                                                                                          <---------AtMYB61                                                                                        <------MYB83                                                                                        <------MYB46(1)                                                                                        <---------MYB46(3)                                                                                       <---------AtMYB61                                                                                     <-------GAMYB                                                                                    --------->MYB111(2)                                                                                    --------->MYB111(1)                                                                       <-------TEIL <---------MYB46(3)             <---------YAB1                                            ------->TEIL --------->MYB55(2)       <---------TOE1(3)                                       ----------->GT1     <--------P<-------       <---------TOE2(3)    <-----------GT1 <---------DAG2    --------->DAG2      <-------GAMYB <<<<<WRKY63 <---------TOE1(3)              <----------DOF2 ---------->DOF2      <---------MYB46(3) ---->GT1    <---------TOE2(3) --------------->AGL15    --------->AtLEC2        <---------YAB1   caaatatttgacgttaagattaatctaatttttctatttatgtatactttttgagaccatacaaaaggtaatgtacatgttgatggttgttggtggtgtc  8259100                                                                             <---------ANAC46                                    ------->MYC3                           ----------->GT1<---------At4g35610   --------->ARR11(3)               <-------MYC3                         ------->MYC3     --------->At4g35610   <---------ARR11(3)         <---------ZAT6                    --------->YAB1   <---------YAB1     - --ANAC46 ------->TEIL        ----------->HVH21   <-----------GT1        <-------MYC3 <-----------HVH21   cataagataatgcattttttacatagaaggtagtgacacatgtaatttgttttcacaatctcacaaatataaacatgtggtttataaatgtcagaagaaa  8259200  Previous    Next  AGI:  At1g23260.1    Description:  MMZ1/UEV1A (MMS ZWEI HOMOLOGE 1); protein binding / ubiquitin-protein ligase. similar to MMZ2/UEV1B (MMS ZWEI HOMOLOGE 2), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G70660.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63218.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 8256975    to: 8258677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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